NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
2QU0A-2HHBD
confEVID 2QU0A-2HHBD
pdbIDA 2QU0
pdbIDB 2HHB
pdbChainA A
pdbChainB D
identity 0.428600013256073
indelSize 1
alignment <alignment>
<seq1>-VLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGEKVAAALTKAVGHLDDLPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSKYR</seq1>
<seq2>VHLTPEEKSAVTALWGKVN--VDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH GGG HHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHGGG --HHHHHHHHHHHHHHH GGGG GGG HHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHHHH HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2HHB</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2HHBD</entryIDChain>
<sequence>WGKVN--VDEVG</sequence>
<secondary-structure>GGG --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3370 CA TRP D 15 -24.318 -14.723 -5.096 1.00 16.92 C </line>
<line>ATOM 3384 CA GLY D 16 -27.458 -16.626 -6.168 1.00 21.85 C </line>
<line>ATOM 3388 CA LYS D 17 -29.278 -13.242 -6.156 1.00 22.04 C </line>
<line>ATOM 3397 CA VAL D 18 -26.634 -11.391 -8.259 1.00 24.65 C </line>
<line>ATOM 3404 CA ASN D 19 -27.497 -10.511 -11.847 1.00 25.83 C </line>
<line>ATOM 3412 CA VAL D 20 -24.013 -11.027 -13.153 1.00 39.11 C </line>
<line>ATOM 3419 CA ASP D 21 -24.451 -8.939 -16.231 1.00 46.84 C </line>
<line>ATOM 3427 CA GLU D 22 -25.779 -5.899 -14.348 1.00 24.57 C </line>
<line>ATOM 3436 CA VAL D 23 -23.348 -6.079 -11.344 1.00 18.71 C </line>
<line>ATOM 3443 CA GLY D 24 -20.429 -6.767 -13.700 1.00 18.52 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU ASP VAL ASN VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.35 10.71 12.87 12.55 8.87 8.57 5.14 5.28 3.82 </line>
<line>GLY CA 14.26 12.45 13.59 13.02 9.59 8.35 5.70 3.84 </line>
<line>LYS CA 13.31 10.65 11.54 11.97 9.03 6.56 3.85 </line>
<line>VAL CA 9.46 6.97 8.24 8.62 5.56 3.79 </line>
<line>ASN CA 8.21 6.09 5.52 5.56 3.76 </line>
<line>VAL CA 5.59 5.31 5.55 3.75 </line>
<line>ASP CA 5.22 5.77 3.81 </line>
<line>GLU CA 5.46 3.87 </line>
<line>VAL CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 339</line>
<line>GLY CA 236</line>
<line>LYS CA 219</line>
<line>VAL CA 301</line>
<line>ASN CA 252</line>
<line>VAL CA 290</line>
<line>ASP CA 269</line>
<line>GLU CA 293</line>
<line>VAL CA 366</line>
<line>GLY CA 390</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QU0A</entryIDChain>
<sequence>WGKVGGNAGAYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 90 CA TRP A 14 -10.884 35.550 63.142 1.00 32.76 C </line>
<line>ATOM 104 CA GLY A 15 -14.262 35.849 64.884 1.00 33.39 C </line>
<line>ATOM 108 CA LYS A 16 -12.241 37.581 67.544 1.00 35.75 C </line>
<line>ATOM 117 CA VAL A 17 -10.872 40.039 64.919 1.00 34.15 C </line>
<line>ATOM 124 CA GLY A 18 -14.523 41.006 64.279 1.00 34.56 C </line>
<line>ATOM 128 CA GLY A 19 -15.280 44.426 62.760 1.00 35.42 C </line>
<line>ATOM 132 CA ASN A 20 -11.582 45.331 62.859 1.00 35.25 C </line>
<line>ATOM 140 CA ALA A 21 -10.412 43.174 59.918 1.00 33.09 C </line>
<line>ATOM 145 CA GLY A 22 -10.416 46.212 57.611 1.00 31.17 C </line>
<line>ATOM 149 CA ALA A 23 -8.097 48.229 59.873 1.00 29.78 C </line>
<line>ATOM 154 CA TYR A 24 -5.747 45.225 60.344 1.00 27.91 C </line>
<line>ATOM 166 CA GLY A 25 -5.603 44.524 56.655 1.00 27.92 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR ALA GLY ALA ASN GLY GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.27 11.31 13.39 12.02 8.29 9.81 9.91 6.66 4.83 5.03 3.81 </line>
<line>GLY CA 14.76 13.45 14.71 13.23 9.65 10.06 8.89 5.20 5.39 3.76 </line>
<line>LYS CA 14.52 12.35 13.76 13.28 9.63 9.08 8.89 5.25 3.85 </line>
<line>VAL CA 10.78 8.61 10.01 9.58 5.92 5.72 6.58 3.83 </line>
<line>GLY CA 12.25 10.50 10.62 9.40 6.37 5.42 3.82 </line>
<line>GLY CA 11.44 9.87 8.63 7.30 5.77 3.81 </line>
<line>ASN CA 8.65 6.35 5.43 5.45 3.83 </line>
<line>ALA CA 5.97 5.11 5.56 3.81 </line>
<line>GLY CA 5.19 5.50 3.82 </line>
<line>ALA CA 5.50 3.84 </line>
<line>TYR CA 3.76 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 369</line>
<line>GLY CA 239</line>
<line>LYS CA 250</line>
<line>VAL CA 307</line>
<line>GLY CA 210</line>
<line>GLY CA 180</line>
<line>ASN CA 242</line>
<line>ALA CA 321</line>
<line>GLY CA 281</line>
<line>ALA CA 296</line>
<line>TYR CA 359</line>
<line>GLY CA 402</line>
</n14>
</entryChain>
<parallel>
<x>-14.71500015258789</x>
<y>-52.5</y>
<z>-72.9280014038086</z>
</parallel>
<rotation>
<x>0.5669999718666077</x>
<y>0.7170000076293945</y>
<z>0.4059999883174896</z>
<x>-0.3499999940395355</x>
<y>0.6549999713897705</y>
<z>-0.6690000295639038</z>
<x>-0.7459999918937683</x>
<y>0.2370000034570694</y>
<z>0.621999979019165</z>
</rotation>
<rmsd>1.583206057548523</rmsd>
<dmax>3.5069739818573</dmax>
</indel>