NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
2QU0A-2HHED
confEVID 2QU0A-2HHED
pdbIDA 2QU0
pdbIDB 2HHE
pdbChainA A
pdbChainB D
identity 0.406699985265732
indelSize 2
alignment <alignment>
<seq1>VLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQ-----VKGHGEKVAAALTKAVGHLDD---LPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSKYR</seq1>
<seq2>MLTPEEKSAVTALWGKVN--VDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDG---LAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH</seq2>
<ss_1> HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - HH-----HHHHHHHHHHHHHHHHH GGG--- HHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHHH --HHHHHHHHHHHHHHH GGGG HHHH HHHHHHHHHHHHHHH---GGG HHHHHHHHHHHHH HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QU0A</entryIDChain>
<sequence>HGSAQ-----VKGHG</sequence>
<secondary-structure> HH-----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 371 CA HIS A 50 1.106 56.646 56.099 1.00 43.12 C </line>
<line>ATOM 381 CA GLY A 51 -2.641 56.763 56.509 1.00 41.13 C </line>
<line>ATOM 385 CA SER A 52 -3.493 56.799 52.813 1.00 39.11 C </line>
<line>ATOM 391 CA ALA A 53 -7.184 56.464 51.979 1.00 37.03 C </line>
<line>ATOM 396 CA GLN A 54 -6.296 54.066 49.127 1.00 35.12 C </line>
<line>ATOM 405 CA VAL A 55 -4.364 51.750 51.378 1.00 33.59 C </line>
<line>ATOM 412 CA LYS A 56 -7.193 51.753 53.932 1.00 33.20 C </line>
<line>ATOM 421 CA GLY A 57 -9.575 50.980 51.105 1.00 32.21 C </line>
<line>ATOM 425 CA HIS A 58 -7.340 48.118 49.956 1.00 32.27 C </line>
<line>ATOM 435 CA GLY A 59 -7.084 46.936 53.560 1.00 31.71 C </line>
</atom-coordinate>
<distance-map>
<line> GLY HIS GLY LYS VAL GLN ALA SER GLY HIS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>HIS CA 12.95 13.48 13.08 9.87 8.73 10.49 9.26 5.65 3.77 </line>
<line>GLY CA 11.18 11.82 10.52 7.24 7.38 8.67 6.42 3.79 </line>
<line>SER CA 10.52 9.92 8.59 6.36 5.32 5.38 3.80 </line>
<line>ALA CA 9.66 8.59 6.05 5.10 5.53 3.83 </line>
<line>GLN CA 8.43 6.10 4.92 5.41 3.76 </line>
<line>VAL CA 5.94 4.91 5.27 3.81 </line>
<line>LYS CA 4.83 5.39 3.78 </line>
<line>GLY CA 5.35 3.81 </line>
<line>HIS CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>HIS CA 197</line>
<line>GLY CA 197</line>
<line>SER CA 217</line>
<line>ALA CA 189</line>
<line>GLN CA 223</line>
<line>VAL CA 288</line>
<line>LYS CA 258</line>
<line>GLY CA 231</line>
<line>HIS CA 303</line>
<line>GLY CA 349</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2HHE</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2HHED</entryIDChain>
<sequence>TPDAVMGNPKVKAHG</sequence>
<secondary-structure> HHHH HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3634 CA THR D 50 -6.143 25.795 21.584 1.00 28.94 C </line>
<line>ATOM 3641 CA PRO D 51 -7.767 24.136 24.564 1.00 27.97 C </line>
<line>ATOM 3648 CA ASP D 52 -10.922 24.379 22.452 1.00 28.67 C </line>
<line>ATOM 3656 CA ALA D 53 -9.614 22.961 19.198 1.00 27.74 C </line>
<line>ATOM 3661 CA VAL D 54 -7.989 20.225 21.315 1.00 26.16 C </line>
<line>ATOM 3668 CA MET D 55 -11.008 19.389 23.408 1.00 24.37 C </line>
<line>ATOM 3676 CA GLY D 56 -13.391 19.192 20.445 1.00 24.32 C </line>
<line>ATOM 3680 CA ASN D 57 -10.965 17.586 18.040 1.00 21.17 C </line>
<line>ATOM 3688 CA PRO D 58 -12.567 14.385 16.792 1.00 18.35 C </line>
<line>ATOM 3695 CA LYS D 59 -9.333 12.353 16.811 1.00 17.01 C </line>
<line>ATOM 3704 CA VAL D 60 -8.580 13.177 20.462 1.00 15.76 C </line>
<line>ATOM 3711 CA LYS D 61 -12.014 11.894 21.459 1.00 18.12 C </line>
<line>ATOM 3720 CA ALA D 62 -11.682 8.867 19.211 1.00 17.54 C </line>
<line>ATOM 3725 CA HIS D 63 -8.208 8.006 20.534 1.00 18.84 C </line>
<line>ATOM 3735 CA GLY D 64 -9.161 8.790 24.101 1.00 17.21 C </line>
</atom-coordinate>
<distance-map>
<line> GLY HIS ALA LYS VAL LYS PRO ASN GLY MET VAL ALA ASP PRO THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 17.45 17.94 17.97 15.09 12.90 14.62 13.94 10.16 9.87 8.25 5.87 5.08 5.06 3.78 </line>
<line>PRO CA 15.42 16.63 16.65 13.32 11.73 14.19 13.36 9.78 8.55 5.86 5.09 5.80 3.80 </line>
<line>ASP CA 15.77 16.71 15.87 12.57 11.62 13.38 11.60 8.10 6.09 5.08 5.21 3.78 </line>
<line>ALA CA 15.00 15.08 14.24 11.55 9.92 10.88 9.38 5.66 5.48 5.69 3.82 </line>
<line>VAL CA 11.83 12.25 12.13 9.25 7.12 9.17 8.69 5.15 5.57 3.77 </line>
<line>MET CA 10.78 12.07 11.35 7.81 7.29 9.79 8.44 5.66 3.81 </line>
<line>GLY CA 11.81 12.33 10.54 7.50 7.70 8.74 6.09 3.77 </line>
<line>ASN CA 10.83 10.28 8.83 6.72 5.57 5.62 3.79 </line>
<line>PRO CA 9.81 8.58 6.09 5.32 5.55 3.82 </line>
<line>LYS CA 8.12 5.83 4.84 5.39 3.82 </line>
<line>VAL CA 5.73 5.18 5.46 3.80 </line>
<line>LYS CA 4.98 5.52 3.79 </line>
<line>ALA CA 5.50 3.82 </line>
<line>HIS CA 3.77 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>THR CA 182</line>
<line>PRO CA 220</line>
<line>ASP CA 181</line>
<line>ALA CA 205</line>
<line>VAL CA 292</line>
<line>MET CA 291</line>
<line>GLY CA 232</line>
<line>ASN CA 250</line>
<line>PRO CA 230</line>
<line>LYS CA 260</line>
<line>VAL CA 337</line>
<line>LYS CA 293</line>
<line>ALA CA 245</line>
<line>HIS CA 321</line>
<line>GLY CA 388</line>
</n14>
</entryChain>
<parallel>
<x>4.383999824523926</x>
<y>35.472999572753906</y>
<z>31.586999893188477</z>
</parallel>
<rotation>
<x>0.878000020980835</x>
<y>-0.4090000092983246</y>
<z>-0.24899999797344208</z>
<x>0.46000000834465027</x>
<y>0.8640000224113464</y>
<z>0.2029999941587448</z>
<x>0.13199999928474426</x>
<y>-0.2930000126361847</y>
<z>0.9470000267028809</z>
</rotation>
<rmsd>3.95450496673584</rmsd>
<dmax>4.9263691902160645</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2HHE</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2HHED</entryIDChain>
<sequence>WGKVN--VDEVG</sequence>
<secondary-structure>HH --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3352 CA TRP D 15 -15.944 2.426 37.169 1.00 15.23 C </line>
<line>ATOM 3366 CA GLY D 16 -19.514 1.137 36.886 1.00 18.79 C </line>
<line>ATOM 3370 CA LYS D 17 -20.695 4.753 36.621 1.00 21.51 C </line>
<line>ATOM 3379 CA VAL D 18 -18.136 5.657 33.945 1.00 23.99 C </line>
<line>ATOM 3386 CA ASN D 19 -18.971 6.327 30.344 1.00 26.03 C </line>
<line>ATOM 3394 CA VAL D 20 -15.568 5.219 29.090 1.00 27.82 C </line>
<line>ATOM 3401 CA ASP D 21 -15.971 7.229 25.881 1.00 28.35 C </line>
<line>ATOM 3409 CA GLU D 22 -16.822 10.469 27.583 1.00 25.48 C </line>
<line>ATOM 3418 CA VAL D 23 -14.077 10.176 30.221 1.00 21.12 C </line>
<line>ATOM 3425 CA GLY D 24 -11.600 8.862 27.646 1.00 17.37 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU ASP VAL ASN VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.29 10.57 12.54 12.27 8.56 8.42 5.06 5.32 3.81 </line>
<line>GLY CA 14.41 12.48 13.45 13.07 9.64 8.37 5.57 3.81 </line>
<line>LYS CA 13.42 10.68 11.37 11.99 9.12 6.70 3.81 </line>
<line>VAL CA 9.63 7.12 8.08 8.50 5.51 3.76 </line>
<line>ASN CA 8.25 6.23 5.42 5.45 3.79 </line>
<line>VAL CA 5.58 5.30 5.60 3.81 </line>
<line>ASP CA 4.99 5.58 3.76 </line>
<line>GLU CA 5.46 3.82 </line>
<line>VAL CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 343</line>
<line>GLY CA 230</line>
<line>LYS CA 216</line>
<line>VAL CA 298</line>
<line>ASN CA 252</line>
<line>VAL CA 304</line>
<line>ASP CA 272</line>
<line>GLU CA 293</line>
<line>VAL CA 370</line>
<line>GLY CA 386</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QU0A</entryIDChain>
<sequence>WGKVGGNAGAYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 90 CA TRP A 14 -10.884 35.550 63.142 1.00 32.76 C </line>
<line>ATOM 104 CA GLY A 15 -14.262 35.849 64.884 1.00 33.39 C </line>
<line>ATOM 108 CA LYS A 16 -12.241 37.581 67.544 1.00 35.75 C </line>
<line>ATOM 117 CA VAL A 17 -10.872 40.039 64.919 1.00 34.15 C </line>
<line>ATOM 124 CA GLY A 18 -14.523 41.006 64.279 1.00 34.56 C </line>
<line>ATOM 128 CA GLY A 19 -15.280 44.426 62.760 1.00 35.42 C </line>
<line>ATOM 132 CA ASN A 20 -11.582 45.331 62.859 1.00 35.25 C </line>
<line>ATOM 140 CA ALA A 21 -10.412 43.174 59.918 1.00 33.09 C </line>
<line>ATOM 145 CA GLY A 22 -10.416 46.212 57.611 1.00 31.17 C </line>
<line>ATOM 149 CA ALA A 23 -8.097 48.229 59.873 1.00 29.78 C </line>
<line>ATOM 154 CA TYR A 24 -5.747 45.225 60.344 1.00 27.91 C </line>
<line>ATOM 166 CA GLY A 25 -5.603 44.524 56.655 1.00 27.92 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR ALA GLY ALA ASN GLY GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.27 11.31 13.39 12.02 8.29 9.81 9.91 6.66 4.83 5.03 3.81 </line>
<line>GLY CA 14.76 13.45 14.71 13.23 9.65 10.06 8.89 5.20 5.39 3.76 </line>
<line>LYS CA 14.52 12.35 13.76 13.28 9.63 9.08 8.89 5.25 3.85 </line>
<line>VAL CA 10.78 8.61 10.01 9.58 5.92 5.72 6.58 3.83 </line>
<line>GLY CA 12.25 10.50 10.62 9.40 6.37 5.42 3.82 </line>
<line>GLY CA 11.44 9.87 8.63 7.30 5.77 3.81 </line>
<line>ASN CA 8.65 6.35 5.43 5.45 3.83 </line>
<line>ALA CA 5.97 5.11 5.56 3.81 </line>
<line>GLY CA 5.19 5.50 3.82 </line>
<line>ALA CA 5.50 3.84 </line>
<line>TYR CA 3.76 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 369</line>
<line>GLY CA 239</line>
<line>LYS CA 250</line>
<line>VAL CA 307</line>
<line>GLY CA 210</line>
<line>GLY CA 180</line>
<line>ASN CA 242</line>
<line>ALA CA 321</line>
<line>GLY CA 281</line>
<line>ALA CA 296</line>
<line>TYR CA 359</line>
<line>GLY CA 402</line>
</n14>
</entryChain>
<parallel>
<x>-6.238999843597412</x>
<y>-35.553001403808594</y>
<z>-30.58099937438965</z>
</parallel>
<rotation>
<x>0.6909999847412109</x>
<y>0.656000018119812</y>
<z>0.30300000309944153</z>
<x>-0.2919999957084656</x>
<y>0.6370000243186951</y>
<z>-0.7139999866485596</z>
<x>-0.6610000133514404</x>
<y>0.4050000011920929</y>
<z>0.6320000290870667</z>
</rotation>
<rmsd>1.5845539569854736</rmsd>
<dmax>3.472445011138916</dmax>
</indel>