NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1A9WC-2ZLWD
confEVID 1A9WC-2ZLWD
pdbIDA 1A9W
pdbIDB 2ZLW
pdbChainA C
pdbChainB D
identity 0.41499999165535
indelSize 2
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLSHG-----SAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH HHHH HHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1A9W</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1A9WC</entryIDChain>
<sequence>DLSHG-----SAQVK</sequence>
<secondary-structure> ----- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2467 CA ASP C 47 -10.437 8.024 52.498 1.00 54.12 C </line>
<line>ATOM 2475 CA LEU C 48 -8.904 9.518 55.645 1.00101.93 C </line>
<line>ATOM 2483 CA SER C 49 -11.740 8.503 58.002 1.00 97.71 C </line>
<line>ATOM 2489 CA HIS C 50 -11.126 6.953 61.468 1.00 90.47 C </line>
<line>ATOM 2494 CA GLY C 51 -10.129 3.350 60.694 1.00 75.91 C </line>
<line>ATOM 2498 CA SER C 52 -9.498 3.604 56.943 1.00 65.17 C </line>
<line>ATOM 2504 CA ALA C 53 -8.263 0.501 55.143 1.00 71.69 C </line>
<line>ATOM 2509 CA GLN C 54 -6.072 2.665 52.907 1.00 64.46 C </line>
<line>ATOM 2518 CA VAL C 55 -4.345 4.355 55.853 1.00 48.15 C </line>
<line>ATOM 2525 CA LYS C 56 -3.707 1.102 57.736 1.00 45.87 C </line>
</atom-coordinate>
<distance-map>
<line> LYS VAL GLN ALA SER GLY HIS SER LEU ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 10.98 7.86 6.92 8.27 6.34 9.44 9.06 5.68 3.81 </line>
<line>LEU CA 10.11 6.89 7.90 9.05 6.08 8.06 6.74 3.82 </line>
<line>SER CA 10.93 8.75 9.60 9.18 5.49 6.03 3.85 </line>
<line>HIS CA 10.16 9.18 10.83 9.48 5.86 3.82 </line>
<line>GLY CA 7.42 7.61 8.81 6.51 3.81 </line>
<line>SER CA 6.36 5.32 5.38 3.79 </line>
<line>ALA CA 5.28 5.54 3.81 </line>
<line>GLN CA 5.60 3.81 </line>
<line>VAL CA 3.81 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ASP CA 177</line>
<line>LEU CA 230</line>
<line>SER CA 181</line>
<line>HIS CA 160</line>
<line>GLY CA 165</line>
<line>SER CA 193</line>
<line>ALA CA 172</line>
<line>GLN CA 202</line>
<line>VAL CA 264</line>
<line>LYS CA 243</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>DLSNPGAVMGNPKVK</sequence>
<secondary-structure> HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3630 CA ASP D 47 -29.141 -5.668 46.165 1.00 29.86 C </line>
<line>ATOM 3638 CA LEU D 48 -27.704 -5.763 42.624 1.00 16.24 C </line>
<line>ATOM 3646 CA SER D 49 -27.448 -9.565 42.377 1.00 24.16 C </line>
<line>ATOM 3652 CA ASN D 50 -29.616 -10.625 39.438 1.00 41.54 C </line>
<line>ATOM 3660 CA PRO D 51 -31.076 -8.686 36.440 1.00 34.87 C </line>
<line>ATOM 3667 CA GLY D 52 -34.703 -8.259 37.615 1.00 29.21 C </line>
<line>ATOM 3671 CA ALA D 53 -33.702 -7.001 41.054 1.00 25.43 C </line>
<line>ATOM 3676 CA VAL D 54 -31.347 -4.365 39.528 1.00 25.94 C </line>
<line>ATOM 3683 CA MET D 55 -33.964 -2.754 37.187 1.00 29.82 C </line>
<line>ATOM 3691 CA GLY D 56 -36.655 -2.681 39.881 1.00 24.63 C </line>
<line>ATOM 3695 CA ASN D 57 -34.073 -1.079 42.204 1.00 26.57 C </line>
<line>ATOM 3703 CA PRO D 58 -35.338 2.411 43.238 1.00 16.40 C </line>
<line>ATOM 3710 CA LYS D 59 -31.796 3.656 43.733 1.00 33.64 C </line>
<line>ATOM 3719 CA VAL D 60 -30.880 2.563 40.215 1.00 28.03 C </line>
<line>ATOM 3726 CA LYS D 61 -33.766 4.492 38.681 1.00 21.91 C </line>
</atom-coordinate>
<distance-map>
<line> LYS VAL LYS PRO ASN GLY MET VAL ALA GLY PRO ASN SER LEU ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 13.44 10.30 10.00 10.59 7.81 10.24 10.60 7.11 6.98 10.52 10.36 8.37 5.69 3.82 </line>
<line>LEU CA 12.55 9.23 10.33 11.20 7.92 9.86 8.82 4.98 6.32 8.96 7.63 6.12 3.82 </line>
<line>SER CA 15.85 12.79 13.98 14.37 10.77 11.76 10.76 7.10 6.89 8.78 7.01 3.80 </line>
<line>ASN CA 15.69 13.27 15.07 14.73 10.89 10.62 9.27 6.50 5.70 5.90 3.86 </line>
<line>PRO CA 13.64 11.87 14.35 13.69 10.00 8.89 6.64 5.32 5.57 3.84 </line>
<line>GLY CA 12.83 11.77 13.71 12.08 8.54 6.33 5.57 5.49 3.80 </line>
<line>ALA CA 11.74 10.01 11.15 9.80 6.04 5.36 5.75 3.85 </line>
<line>VAL CA 9.22 6.98 9.07 8.70 5.04 5.58 3.86 </line>
<line>MET CA 7.40 6.85 9.41 8.07 5.29 3.81 </line>
<line>GLY CA 7.83 7.81 8.87 6.24 3.82 </line>
<line>ASN CA 6.60 5.24 5.47 3.85 </line>
<line>PRO CA 5.25 5.39 3.79 </line>
<line>LYS CA 5.49 3.80 </line>
<line>VAL CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ASP CA 194</line>
<line>LEU CA 255</line>
<line>SER CA 192</line>
<line>ASN CA 165</line>
<line>PRO CA 213</line>
<line>GLY CA 173</line>
<line>ALA CA 191</line>
<line>VAL CA 286</line>
<line>MET CA 285</line>
<line>GLY CA 230</line>
<line>ASN CA 256</line>
<line>PRO CA 220</line>
<line>LYS CA 253</line>
<line>VAL CA 332</line>
<line>LYS CA 303</line>
</n14>
</entryChain>
<parallel>
<x>21.253000259399414</x>
<y>9.805000305175781</y>
<z>14.635000228881836</z>
</parallel>
<rotation>
<x>0.5090000033378601</x>
<y>0.8610000014305115</y>
<z>0.009999999776482582</z>
<x>0.7639999985694885</x>
<y>-0.44699999690055847</y>
<z>-0.4659999907016754</z>
<x>-0.3970000147819519</x>
<y>0.24500000476837158</y>
<z>-0.8849999904632568</z>
</rotation>
<rmsd>2.6908249855041504</rmsd>
<dmax>3.7597060203552246</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1A9W</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1A9WC</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2209 CA TRP C 14 14.054 -1.355 65.277 1.00 47.22 C </line>
<line>ATOM 2223 CA GLY C 15 14.484 -4.995 66.267 1.00 55.30 C </line>
<line>ATOM 2227 CA LYS C 16 12.309 -4.499 69.361 1.00 43.99 C </line>
<line>ATOM 2236 CA VAL C 17 9.629 -2.929 67.132 1.00 50.49 C </line>
<line>ATOM 2243 CA GLY C 18 9.552 -6.148 65.136 1.00 55.36 C </line>
<line>ATOM 2247 CA ALA C 19 6.129 -7.388 64.052 1.00 71.21 C </line>
<line>ATOM 2252 CA HIS C 20 4.214 -4.254 65.052 1.00 67.98 C </line>
<line>ATOM 2262 CA ALA C 21 6.129 -2.106 62.535 1.00 49.98 C </line>
<line>ATOM 2267 CA GLY C 22 3.019 -1.986 60.353 1.00 47.00 C </line>
<line>ATOM 2271 CA GLU C 23 0.647 -1.147 63.237 1.00 54.51 C </line>
<line>ATOM 2276 CA TYR C 24 2.970 1.683 64.338 1.00 40.19 C </line>
<line>ATOM 2288 CA GLY C 25 3.263 3.101 60.827 1.00 43.41 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.49 11.53 13.56 12.10 8.42 10.26 10.04 6.58 5.05 5.44 3.80 </line>
<line>GLY CA 14.87 13.45 14.68 13.25 9.60 10.37 8.97 5.19 5.35 3.81 </line>
<line>LYS CA 14.57 12.27 13.59 13.18 9.51 9.17 8.64 5.31 3.82 </line>
<line>VAL CA 10.80 8.57 9.95 9.52 5.84 5.95 6.45 3.79 </line>
<line>GLY CA 11.99 10.26 10.39 9.10 5.90 5.66 3.80 </line>
<line>ALA CA 11.34 9.61 8.35 7.25 5.50 3.81 </line>
<line>HIS CA 8.54 6.11 5.07 5.35 3.82 </line>
<line>ALA CA 6.18 5.25 5.61 3.80 </line>
<line>GLY CA 5.11 5.42 3.83 </line>
<line>GLU CA 5.54 3.82 </line>
<line>TYR CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 362</line>
<line>GLY CA 239</line>
<line>LYS CA 244</line>
<line>VAL CA 304</line>
<line>GLY CA 218</line>
<line>ALA CA 180</line>
<line>HIS CA 236</line>
<line>ALA CA 301</line>
<line>GLY CA 263</line>
<line>GLU CA 279</line>
<line>TYR CA 336</line>
<line>GLY CA 376</line>
</n14>
</entryChain>
<parallel>
<x>-45.83300018310547</x>
<y>14.178999900817871</y>
<z>-37.23099899291992</z>
</parallel>
<rotation>
<x>0.21899999678134918</x>
<y>0.7919999957084656</y>
<z>-0.5699999928474426</z>
<x>0.9150000214576721</x>
<y>-0.3700000047683716</y>
<z>-0.16300000250339508</z>
<x>-0.3400000035762787</x>
<y>-0.4860000014305115</y>
<z>-0.8050000071525574</z>
</rotation>
<rmsd>1.5918090343475342</rmsd>
<dmax>3.31140398979187</dmax>
</indel>