NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ABYA-2ZLWD
confEVID 1ABYA-2ZLWD
pdbIDA 1ABY
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.418900012969971
indelSize 1
alignment <alignment>
<seq1>MLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYRGVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>---------------------------------------------------------------------------------------------------------------------------------------------VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1> HHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG HHHHHHHHHHHHHHHHHHH HHHH HHHHHHH HHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH HHHH HHHHHIIIII HHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHH </ss_1>
<ss_2>--------------------------------------------------------------------------------------------------------------------------------------------- HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ABY</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ABYA</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>H HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1166 CA TRP A 156 28.939 2.251 16.758 1.00 36.67 C </line>
<line>ATOM 1180 CA GLY A 157 29.089 -1.483 17.169 1.00 41.36 C </line>
<line>ATOM 1184 CA LYS A 158 30.780 -1.658 13.794 1.00 46.74 C </line>
<line>ATOM 1193 CA VAL A 159 33.472 0.632 15.170 1.00 52.27 C </line>
<line>ATOM 1200 CA GLY A 160 34.628 -1.630 17.987 1.00 65.00 C </line>
<line>ATOM 1204 CA ALA A 161 38.300 -1.533 19.040 1.00 68.59 C </line>
<line>ATOM 1209 CA HIS A 162 38.796 1.190 16.451 1.00 56.93 C </line>
<line>ATOM 1219 CA ALA A 163 36.909 3.647 18.653 1.00 48.28 C </line>
<line>ATOM 1224 CA GLY A 164 39.953 5.096 20.404 1.00 45.76 C </line>
<line>ATOM 1228 CA GLU A 165 41.582 5.110 16.980 1.00 45.58 C </line>
<line>ATOM 1237 CA TYR A 166 38.705 7.129 15.472 1.00 33.51 C </line>
<line>ATOM 1249 CA GLY A 167 38.230 9.526 18.396 1.00 29.92 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 11.91 10.99 12.96 11.95 8.31 9.92 10.35 7.00 5.07 5.24 3.76 </line>
<line>GLY CA 14.36 13.02 14.13 13.11 9.47 10.09 9.40 5.60 5.26 3.78 </line>
<line>LYS CA 14.20 11.95 13.14 13.17 9.45 8.91 9.17 5.69 3.79 </line>
<line>VAL CA 10.59 8.35 9.44 9.45 5.75 5.50 6.56 3.79 </line>
<line>GLY CA 11.73 9.98 9.74 8.91 5.79 5.26 3.82 </line>
<line>ALA CA 11.08 9.38 7.69 6.97 5.38 3.79 </line>
<line>HIS CA 8.58 6.02 4.84 5.68 3.80 </line>
<line>ALA CA 6.03 5.05 5.17 3.80 </line>
<line>GLY CA 5.16 5.48 3.79 </line>
<line>GLU CA 5.72 3.82 </line>
<line>TYR CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 393</line>
<line>GLY CA 260</line>
<line>LYS CA 251</line>
<line>VAL CA 308</line>
<line>GLY CA 222</line>
<line>ALA CA 199</line>
<line>HIS CA 253</line>
<line>ALA CA 323</line>
<line>GLY CA 284</line>
<line>GLU CA 307</line>
<line>TYR CA 366</line>
<line>GLY CA 410</line>
</n14>
</entryChain>
<parallel>
<x>-71.52400207519531</x>
<y>9.538000106811523</y>
<z>10.565999984741211</z>
</parallel>
<rotation>
<x>-0.36500000953674316</x>
<y>-0.6790000200271606</y>
<z>0.6380000114440918</z>
<x>0.9300000071525574</x>
<y>-0.2980000078678131</y>
<z>0.2150000035762787</z>
<x>0.04399999976158142</x>
<y>0.6710000038146973</y>
<z>0.7400000095367432</z>
</rotation>
<rmsd>1.54578697681427</rmsd>
<dmax>3.146167039871216</dmax>
</indel>