NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ACLA-2C0PA
confEVID 1ACLA-2C0PA
pdbIDA 1ACL
pdbIDB 2C0P
pdbChainA A
pdbChainB A
identity 0.587199985980988
indelSize 2
alignment <alignment>
<seq1>-----SELLVNTKSGKVMGTRVPVLSSHISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNPNREMSEDCLYLNIWVPSPRPK-STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFDSIFRFSFVPVIDGEFFPTSLESMLNSGNFKKTQILLGVNKDEGSFFLLYGAPGFSKDSESKISREDFMSGVKLSVPHANDLGLDAVTLQYTDWMDDNNGIKNRDGLDDIVGDHNVICPLMHFVNKYTKFGNGTYLYFFNHRASNLVWPEWMGVIHGYEIEFVFGLPLVKELNYTAEEEALSRRIMHYWATFAKTGNPNES------KWPLFTTKEQKFIDLNTEPMKVHQRLRVQMCVFWNQFLPKLLNAT</seq1>
<seq2>EGREDPQLLVRVRGGQLRGIRLKAPGGPVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWNPNRELSEDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGC---NDTELIACLRTRPAQDLVDHEWHVLPQESIFRFSFVPVVDGDFLSDTPEALINTGDFQDLQVLVGVVKDEGSYFLVYGVPGFSKDNESLISRAQFLAGVRIGVPQASDLAAEAVVLHYTDWLHPEDPTHLRDAMSAVVGDHNVVCPVAQLAGRLAAQGARVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPSLNYTTEERIFAQRLMKYWTNFARTGDPNDPRDSKSPQWPPYTTAAQQYVSLNLKPLEVRRGLRAQTCAFWNRFLPKLLSA-</seq2>
<ss_1>----- EEEEE EEEEEEEEEE EEEEEEEEEEE GGG EEE HHHGGG EEEEEEE - EEEEEEE GGG HHHHH EEEEE HHHHH HHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHH GGG EEEEE HHHHHHHHHHHHHH HHHHHHHH HHHHGGG HHHHHH EEEEE HHHHH HHHHHHHHHHH HHHHHHHHHHH GGG HHHHHHHHHHHHHIIIIHHHHHHHHHHH EEEEEE EE HHHH GGG GGG HHHHHHHHHHHHHHHHH ------ EEEEEEE EEEEE HHHHHIIIIHHHH </ss_1>
<ss_2> EEEEE EEEEEEEEEE EEEEEEEEEEE GGG HHHGGG EEEEEEE EEEEEEE GGG HHHHH EEE HHHHH HHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHH HHHGGG EEEEE HHHHHHHHHHHHHH --- HHHHHHGGG HHHHHHGGGG HHHHHHH EEEEEEEEE HHHHHHH HHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHIIIIHHHHHHHHHHHH EEEEEEE HHHH GGG HHHHHHHHHHHHHHHHHH EEEEE EEEEE HHHHHIIIIIHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ACL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ACLA</entryIDChain>
<sequence>SPRPK-STTVM</sequence>
<secondary-structure> - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 768 CA SER A 103 -1.631 88.685 39.587 1.00 41.14 C </line>
<line>ATOM 774 CA PRO A 104 -1.127 88.783 36.679 1.00 47.96 C </line>
<line>ATOM 781 CA ARG A 105 -2.297 85.222 36.370 1.00 30.20 C </line>
<line>ATOM 792 CA PRO A 106 0.577 83.500 34.603 1.00 27.72 C </line>
<line>ATOM 799 CA LYS A 107 0.040 81.634 31.299 1.00 27.87 C </line>
<line>ATOM 808 CA SER A 108 1.487 78.418 32.477 1.00 26.10 C </line>
<line>ATOM 814 CA THR A 109 3.990 78.357 35.321 1.00 20.75 C </line>
<line>ATOM 821 CA THR A 110 5.470 75.896 37.829 1.00 14.31 C </line>
<line>ATOM 828 CA VAL A 111 3.106 74.429 40.356 1.00 6.76 C </line>
<line>ATOM 835 CA MET A 112 3.941 73.160 43.868 1.00 13.99 C </line>
</atom-coordinate>
<distance-map>
<line> MET VAL THR THR SER LYS PRO ARG PRO SER </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 17.04 15.04 14.73 12.51 12.87 11.01 7.52 4.77 2.95 </line>
<line>PRO CA 17.93 15.41 14.52 11.69 11.49 9.02 5.93 3.76 </line>
<line>ARG CA 15.51 12.71 12.22 9.37 8.70 6.64 3.79 </line>
<line>PRO CA 14.29 11.04 9.60 6.21 5.58 3.83 </line>
<line>LYS CA 15.65 11.97 10.25 6.52 3.72 </line>
<line>SER CA 12.78 8.98 7.13 3.79 </line>
<line>THR CA 10.00 6.45 3.81 </line>
<line>THR CA 6.80 3.76 </line>
<line>VAL CA 3.83 </line>
<line>MET CA </line>
</distance-map>
<n14>
<line>SER CA 312</line>
<line>PRO CA 263</line>
<line>ARG CA 323</line>
<line>PRO CA 277</line>
<line>LYS CA 220</line>
<line>SER CA 272</line>
<line>THR CA 338</line>
<line>THR CA 421</line>
<line>VAL CA 529</line>
<line>MET CA 598</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2C0P</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2C0PA</entryIDChain>
<sequence>YPRPASPTPVL</sequence>
<secondary-structure> EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 830 CA TYR A 105 16.328 12.176 42.566 1.00 45.67 C </line>
<line>ATOM 842 CA PRO A 106 16.324 10.427 44.882 1.00 53.80 C </line>
<line>ATOM 849 CA ARG A 107 18.251 7.699 42.992 1.00 53.81 C </line>
<line>ATOM 860 CA PRO A 108 16.172 4.791 41.688 1.00 58.87 C </line>
<line>ATOM 867 CA ALA A 109 15.553 1.856 44.074 1.00 67.26 C </line>
<line>ATOM 872 CA SER A 110 15.734 -0.860 41.354 1.00 65.33 C </line>
<line>ATOM 878 CA PRO A 111 18.298 -1.001 38.457 1.00 62.70 C </line>
<line>ATOM 885 CA THR A 112 17.408 1.520 35.744 1.00 52.82 C </line>
<line>ATOM 892 CA PRO A 113 18.210 1.299 32.002 1.00 48.28 C </line>
<line>ATOM 899 CA VAL A 114 21.210 3.438 31.081 1.00 37.02 C </line>
<line>ATOM 906 CA LEU A 115 21.493 5.757 28.070 1.00 37.90 C </line>
</atom-coordinate>
<distance-map>
<line> LEU VAL PRO THR PRO SER ALA PRO ARG PRO TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 16.67 15.23 15.28 12.70 13.94 13.11 10.46 7.44 4.89 2.90 </line>
<line>PRO CA 18.20 16.22 15.90 12.81 13.26 11.84 8.64 6.48 3.84 </line>
<line>ARG CA 15.39 12.99 12.72 9.56 9.81 9.07 6.53 3.81 </line>
<line>PRO CA 14.65 11.82 10.50 6.90 6.96 5.68 3.83 </line>
<line>ALA CA 17.51 14.26 12.37 8.54 6.87 3.85 </line>
<line>SER CA 15.92 12.41 9.91 6.32 3.87 </line>
<line>PRO CA 12.80 9.09 6.85 3.81 </line>
<line>THR CA 9.67 6.31 3.83 </line>
<line>PRO CA 6.79 3.80 </line>
<line>VAL CA 3.81 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>TYR CA 335</line>
<line>PRO CA 287</line>
<line>ARG CA 336</line>
<line>PRO CA 270</line>
<line>ALA CA 171</line>
<line>SER CA 177</line>
<line>PRO CA 250</line>
<line>THR CA 343</line>
<line>PRO CA 413</line>
<line>VAL CA 517</line>
<line>LEU CA 585</line>
</n14>
</entryChain>
<parallel>
<x>-16.253999710083008</x>
<y>77.71600341796875</y>
<z>-4.78000020980835</z>
</parallel>
<rotation>
<x>-0.7419999837875366</x>
<y>-0.5540000200271606</y>
<z>0.3779999911785126</z>
<x>-0.11900000274181366</x>
<y>0.6629999876022339</y>
<z>0.7390000224113464</z>
<x>-0.6600000262260437</x>
<y>0.503000020980835</y>
<z>-0.5580000281333923</z>
</rotation>
<rmsd>1.0168100595474243</rmsd>
<dmax>1.8252580165863037</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2C0P</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2C0PA</entryIDChain>
<sequence>RLVGC---NDTEL</sequence>
<secondary-structure>HH --- HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1930 CA ARG A 253 55.727 18.896 8.314 1.00 51.83 C </line>
<line>ATOM 1941 CA LEU A 254 53.415 21.919 8.735 1.00 44.05 C </line>
<line>ATOM 1949 CA VAL A 255 54.476 22.259 12.369 1.00 47.20 C </line>
<line>ATOM 1956 CA GLY A 256 58.178 21.564 11.749 1.00 57.35 C </line>
<line>ATOM 1960 CA CYS A 257 58.543 17.823 12.390 1.00 58.45 C </line>
<line>ATOM 1966 CA ASN A 265 60.902 6.673 11.789 1.00 72.29 C </line>
<line>ATOM 1974 CA ASP A 266 57.590 7.242 13.606 1.00 60.98 C </line>
<line>ATOM 1982 CA THR A 267 59.076 7.612 17.107 1.00 59.22 C </line>
<line>ATOM 1989 CA GLU A 268 61.008 10.783 16.282 1.00 66.75 C </line>
<line>ATOM 1998 CA LEU A 269 58.052 12.354 14.480 1.00 48.12 C </line>
</atom-coordinate>
<distance-map>
<line> LEU GLU THR ASP ASN CYS GLY VAL LEU ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 9.29 12.54 14.69 12.93 13.72 5.07 4.99 5.41 3.83 </line>
<line>LEU CA 12.08 15.45 17.52 16.02 17.26 7.51 5.65 3.80 </line>
<line>VAL CA 10.74 13.77 16.07 15.39 16.87 6.02 3.82 </line>
<line>GLY CA 9.61 12.03 14.97 14.45 15.14 3.81 </line>
<line>CYS CA 5.88 8.41 11.26 10.69 11.41 </line>
<line>ASN CA 6.90 6.09 5.70 3.82 </line>
<line>ASP CA 5.21 5.60 3.82 </line>
<line>THR CA 5.52 3.80 </line>
<line>GLU CA 3.80 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ARG CA 273</line>
<line>LEU CA 257</line>
<line>VAL CA 273</line>
<line>GLY CA 216</line>
<line>CYS CA 248</line>
<line>ASN CA 175</line>
<line>ASP CA 252</line>
<line>THR CA 232</line>
<line>GLU CA 223</line>
<line>LEU CA 304</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ACL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ACLA</entryIDChain>
<sequence>RNLNCNLNSDEEL</sequence>
<secondary-structure>HH HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1879 CA ARG A 250 -13.508 47.445 71.561 1.00 25.94 C </line>
<line>ATOM 1890 CA ASN A 251 -12.836 50.884 72.933 1.00 30.55 C </line>
<line>ATOM 1898 CA LEU A 252 -16.261 51.871 71.469 1.00 26.17 C </line>
<line>ATOM 1906 CA ASN A 253 -17.846 48.685 72.509 1.00 41.17 C </line>
<line>ATOM 1914 CA CYS A 254 -18.689 47.678 69.086 1.00 37.96 C </line>
<line>ATOM 1920 CA ASN A 255 -19.972 44.461 67.790 1.00 44.83 C </line>
<line>ATOM 1928 CA LEU A 256 -16.925 42.585 66.788 1.00 44.94 C </line>
<line>ATOM 1936 CA ASN A 257 -18.460 39.537 65.213 1.00 46.24 C </line>
<line>ATOM 1941 CA SER A 258 -19.528 40.438 61.816 1.00 47.85 C </line>
<line>ATOM 1947 CA ASP A 259 -16.734 42.632 60.425 1.00 38.08 C </line>
<line>ATOM 1955 CA GLU A 260 -19.452 44.659 58.553 1.00 34.19 C </line>
<line>ATOM 1960 CA GLU A 261 -20.906 45.413 62.053 1.00 29.08 C </line>
<line>ATOM 1969 CA LEU A 262 -17.539 46.673 63.222 1.00 15.57 C </line>
</atom-coordinate>
<distance-map>
<line> LEU GLU GLU ASP SER ASN LEU ASN CYS ASN LEU ASN ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 9.29 12.22 14.57 12.55 13.43 11.29 7.62 8.06 5.75 4.61 5.21 3.76 </line>
<line>ASN CA 11.58 14.61 17.01 15.48 16.66 14.83 11.11 10.89 7.70 5.49 3.85 </line>
<line>LEU CA 9.83 12.33 15.13 14.41 15.32 14.00 10.42 9.07 5.40 3.71 </line>
<line>ASN CA 9.51 11.38 14.61 13.56 13.61 11.72 8.41 6.68 3.67 </line>
<line>CYS CA 6.06 7.71 10.98 10.21 10.29 9.02 5.86 3.70 </line>
<line>ASN CA 5.63 5.89 9.25 8.25 7.22 5.76 3.72 </line>
<line>LEU CA 5.46 6.80 8.86 6.37 6.01 3.76 </line>
<line>ASN CA 7.47 7.11 8.46 5.96 3.67 </line>
<line>SER CA 6.69 5.17 5.34 3.82 </line>
<line>ASP CA 4.98 5.27 3.87 </line>
<line>GLU CA 5.43 3.86 </line>
<line>GLU CA 3.78 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ARG CA 281</line>
<line>ASN CA 278</line>
<line>LEU CA 296</line>
<line>ASN CA 237</line>
<line>CYS CA 251</line>
<line>ASN CA 206</line>
<line>LEU CA 223</line>
<line>ASN CA 163</line>
<line>SER CA 180</line>
<line>ASP CA 259</line>
<line>GLU CA 252</line>
<line>GLU CA 259</line>
<line>LEU CA 332</line>
</n14>
</entryChain>
<parallel>
<x>74.09500122070312</x>
<y>-31.288000106811523</y>
<z>-55.2869987487793</z>
</parallel>
<rotation>
<x>-0.8199999928474426</x>
<y>-0.12700000405311584</y>
<z>-0.5580000281333923</z>
<x>-0.5170000195503235</x>
<y>0.5830000042915344</y>
<z>0.6269999742507935</z>
<x>0.24500000476837158</x>
<y>0.8019999861717224</y>
<z>-0.5440000295639038</z>
</rotation>
<rmsd>0.8287500143051147</rmsd>
<dmax>1.3611669540405273</dmax>
</indel>