NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ACLA-2C0PB
confEVID 1ACLA-2C0PB
pdbIDA 1ACL
pdbIDB 2C0P
pdbChainA A
pdbChainB B
identity 0.587999999523163
indelSize 2
alignment <alignment>
<seq1>--SELLVNTKSGKVMGTRVPVLSSHISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNPNREMSEDCLYLNIWVPSPRPK-STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFDSIFRFSFVPVIDGEFFPTSLESMLNSGNFKKTQILLGVNKDEGSFFLLYGAPGFSKDSESKISREDFMSGVKLSVPHANDLGLDAVTLQYTDWMDDNNGIKNRDGLDDIVGDHNVICPLMHFVNKYTKFGNGTYLYFFNHRASNLVWPEWMGVIHGYEIEFVFGLPLVKELNYTAEEEALSRRIMHYWATFAKTGNPNE------SKWPLFTTKEQKFIDLNTEPMKVHQRLRVQMCVFWNQFLPKLLNAT-</seq1>
<seq2>EDPQLLVRVRGGQLRGIRLKAPGGPVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWNPNRELSEDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGC---NDTELIACLRTRPAQDLVDHEWHVLPQESIFRFSFVPVVDGDFLSDTPEALINTGDFQDLQVLVGVVKDEGSYFLVYGVPGFSKDNESLISRAQFLAGVRIGVPQASDLAAEAVVLHYTDWLHPEDPTHLRDAMSAVVGDHNVVCPVAQLAGRLAAQGARVYAYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPSLNYTTEERIFAQRLMKYWTNFARTGDPNDPRDSKSPQWPPYTTAAQQYVSLNLKPLEVRRGLRAQTCAFWNRFLPKLLSATA</seq2>
<ss_1>-- EEEEE EEEEEEEEEE EEEEEEEEEEE GGG EEE HHHGGG EEEEEEE - EEEEEEE GGG HHHHH EEEEE HHHHH HHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHH GGG EEEEE HHHHHHHHHHHHHH HHHHHHHH HHHHGGG HHHHHH EEEEE HHHHH HHHHHHHHHHH HHHHHHHHHHH GGG HHHHHHHHHHHHHIIIIHHHHHHHHHHH EEEEEE EE HHHH GGG GGG HHHHHHHHHHHHHHHHH ------ EEEEEEE EEEEE HHHHHIIIIHHHH -</ss_1>
<ss_2> EEEEE EEEEEEEEEE EEEEEEEEEEE GGG HHHH EEEEEEE EEEEEEE GGG HHHHH EEE HHHHH HHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHH HHHGGG EEEEE HHHHHHHHHHHHH --- HHHHHHGGG HHHH GGG HHHHHHH EEEEEEEEE GGGG HHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHIIIIHHHHHHHHHHHHH EEEEEEE HHHH GGG HHHHHHHHHHHHHHHHHH EEEEE EEEEE HHHHHIIIIHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ACL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ACLA</entryIDChain>
<sequence>SPRPK-STTVM</sequence>
<secondary-structure> - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 768 CA SER A 103 -1.631 88.685 39.587 1.00 41.14 C </line>
<line>ATOM 774 CA PRO A 104 -1.127 88.783 36.679 1.00 47.96 C </line>
<line>ATOM 781 CA ARG A 105 -2.297 85.222 36.370 1.00 30.20 C </line>
<line>ATOM 792 CA PRO A 106 0.577 83.500 34.603 1.00 27.72 C </line>
<line>ATOM 799 CA LYS A 107 0.040 81.634 31.299 1.00 27.87 C </line>
<line>ATOM 808 CA SER A 108 1.487 78.418 32.477 1.00 26.10 C </line>
<line>ATOM 814 CA THR A 109 3.990 78.357 35.321 1.00 20.75 C </line>
<line>ATOM 821 CA THR A 110 5.470 75.896 37.829 1.00 14.31 C </line>
<line>ATOM 828 CA VAL A 111 3.106 74.429 40.356 1.00 6.76 C </line>
<line>ATOM 835 CA MET A 112 3.941 73.160 43.868 1.00 13.99 C </line>
</atom-coordinate>
<distance-map>
<line> MET VAL THR THR SER LYS PRO ARG PRO SER </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 17.04 15.04 14.73 12.51 12.87 11.01 7.52 4.77 2.95 </line>
<line>PRO CA 17.93 15.41 14.52 11.69 11.49 9.02 5.93 3.76 </line>
<line>ARG CA 15.51 12.71 12.22 9.37 8.70 6.64 3.79 </line>
<line>PRO CA 14.29 11.04 9.60 6.21 5.58 3.83 </line>
<line>LYS CA 15.65 11.97 10.25 6.52 3.72 </line>
<line>SER CA 12.78 8.98 7.13 3.79 </line>
<line>THR CA 10.00 6.45 3.81 </line>
<line>THR CA 6.80 3.76 </line>
<line>VAL CA 3.83 </line>
<line>MET CA </line>
</distance-map>
<n14>
<line>SER CA 312</line>
<line>PRO CA 263</line>
<line>ARG CA 323</line>
<line>PRO CA 277</line>
<line>LYS CA 220</line>
<line>SER CA 272</line>
<line>THR CA 338</line>
<line>THR CA 421</line>
<line>VAL CA 529</line>
<line>MET CA 598</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2C0P</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2C0PB</entryIDChain>
<sequence>YPRPASPTPVL</sequence>
<secondary-structure> EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 4984 CA TYR B 105 -14.687 12.390 -55.555 1.00 72.70 C </line>
<line>ATOM 4996 CA PRO B 106 -15.256 14.596 -57.463 1.00 72.71 C </line>
<line>ATOM 5003 CA ARG B 107 -11.688 15.823 -58.055 1.00 74.71 C </line>
<line>ATOM 5014 CA PRO B 108 -11.019 18.772 -55.695 1.00 75.63 C </line>
<line>ATOM 5021 CA ALA B 109 -12.070 22.185 -57.079 1.00 77.57 C </line>
<line>ATOM 5026 CA SER B 110 -9.052 24.157 -55.811 1.00 73.37 C </line>
<line>ATOM 5032 CA PRO B 111 -5.465 22.892 -55.047 1.00 64.62 C </line>
<line>ATOM 5039 CA THR B 112 -5.706 20.604 -51.951 1.00 57.15 C </line>
<line>ATOM 5046 CA PRO B 113 -2.997 19.929 -49.346 1.00 54.27 C </line>
<line>ATOM 5053 CA VAL B 114 -1.179 16.648 -50.020 1.00 41.66 C </line>
<line>ATOM 5060 CA LEU B 115 -0.247 14.027 -47.436 1.00 42.60 C </line>
</atom-coordinate>
<distance-map>
<line> LEU VAL PRO THR PRO SER ALA PRO ARG PRO TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 16.65 15.21 15.23 12.69 13.99 13.05 10.25 7.36 5.20 2.97 </line>
<line>PRO CA 18.06 16.06 15.64 12.56 13.06 11.52 8.24 6.21 3.82 </line>
<line>ARG CA 15.71 13.25 12.97 9.79 9.89 9.02 6.45 3.84 </line>
<line>PRO CA 14.38 11.56 10.30 6.75 6.95 5.73 3.83 </line>
<line>ALA CA 17.30 14.11 12.13 8.32 6.95 3.82 </line>
<line>SER CA 15.82 12.32 9.82 6.22 3.88 </line>
<line>PRO CA 12.80 9.09 6.88 3.86 </line>
<line>THR CA 9.67 6.31 3.82 </line>
<line>PRO CA 6.79 3.81 </line>
<line>VAL CA 3.80 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>TYR CA 334</line>
<line>PRO CA 284</line>
<line>ARG CA 331</line>
<line>PRO CA 284</line>
<line>ALA CA 174</line>
<line>SER CA 179</line>
<line>PRO CA 252</line>
<line>THR CA 342</line>
<line>PRO CA 417</line>
<line>VAL CA 521</line>
<line>LEU CA 593</line>
</n14>
</entryChain>
<parallel>
<x>10.675000190734863</x>
<y>64.16300201416016</y>
<z>90.54499816894531</z>
</parallel>
<rotation>
<x>-0.10000000149011612</x>
<y>-0.9509999752044678</y>
<z>0.2919999957084656</z>
<x>0.2840000092983246</x>
<y>-0.30799999833106995</y>
<z>-0.9079999923706055</z>
<x>0.953000009059906</x>
<y>-0.00800000037997961</y>
<z>0.3009999990463257</z>
</rotation>
<rmsd>1.0163040161132812</rmsd>
<dmax>1.9422179460525513</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2C0P</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2C0PB</entryIDChain>
<sequence>RLVGC---NDTEL</sequence>
<secondary-structure>H --- HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 6084 CA ARG B 253 30.299 -14.243 -48.356 1.00 69.61 C </line>
<line>ATOM 6095 CA LEU B 254 27.184 -15.964 -46.969 1.00 64.12 C </line>
<line>ATOM 6103 CA VAL B 255 25.757 -16.420 -50.494 1.00 67.52 C </line>
<line>ATOM 6110 CA GLY B 256 28.851 -17.476 -52.459 1.00 69.14 C </line>
<line>ATOM 6114 CA CYS B 257 30.379 -14.142 -53.507 1.00 71.98 C </line>
<line>ATOM 6120 CA ASN B 265 36.696 -5.827 -55.792 1.00 77.75 C </line>
<line>ATOM 6128 CA ASP B 266 33.328 -3.994 -55.418 1.00 67.88 C </line>
<line>ATOM 6136 CA THR B 267 32.287 -4.320 -59.064 1.00 65.52 C </line>
<line>ATOM 6143 CA GLU B 268 32.768 -8.098 -59.061 1.00 76.26 C </line>
<line>ATOM 6152 CA LEU B 269 31.109 -8.560 -55.690 1.00 64.79 C </line>
</atom-coordinate>
<distance-map>
<line> LEU GLU THR ASP ASN CYS GLY VAL LEU ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 9.31 12.59 14.73 12.81 12.92 5.15 5.42 5.47 3.82 </line>
<line>LEU CA 12.09 15.47 17.55 15.89 16.46 7.50 5.93 3.83 </line>
<line>VAL CA 10.84 13.85 16.20 15.36 16.12 5.97 3.81 </line>
<line>GLY CA 9.75 12.12 15.12 14.51 14.43 3.81 </line>
<line>CYS CA 6.04 8.55 11.45 10.74 10.69 </line>
<line>ASN CA 6.22 5.59 5.69 3.85 </line>
<line>ASP CA 5.08 5.52 3.81 </line>
<line>THR CA 5.55 3.81 </line>
<line>GLU CA 3.79 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ARG CA 268</line>
<line>LEU CA 255</line>
<line>VAL CA 269</line>
<line>GLY CA 211</line>
<line>CYS CA 247</line>
<line>ASN CA 173</line>
<line>ASP CA 244</line>
<line>THR CA 229</line>
<line>GLU CA 218</line>
<line>LEU CA 292</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ACL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ACLA</entryIDChain>
<sequence>RNLNCNLNSDEEL</sequence>
<secondary-structure>HH HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1879 CA ARG A 250 -13.508 47.445 71.561 1.00 25.94 C </line>
<line>ATOM 1890 CA ASN A 251 -12.836 50.884 72.933 1.00 30.55 C </line>
<line>ATOM 1898 CA LEU A 252 -16.261 51.871 71.469 1.00 26.17 C </line>
<line>ATOM 1906 CA ASN A 253 -17.846 48.685 72.509 1.00 41.17 C </line>
<line>ATOM 1914 CA CYS A 254 -18.689 47.678 69.086 1.00 37.96 C </line>
<line>ATOM 1920 CA ASN A 255 -19.972 44.461 67.790 1.00 44.83 C </line>
<line>ATOM 1928 CA LEU A 256 -16.925 42.585 66.788 1.00 44.94 C </line>
<line>ATOM 1936 CA ASN A 257 -18.460 39.537 65.213 1.00 46.24 C </line>
<line>ATOM 1941 CA SER A 258 -19.528 40.438 61.816 1.00 47.85 C </line>
<line>ATOM 1947 CA ASP A 259 -16.734 42.632 60.425 1.00 38.08 C </line>
<line>ATOM 1955 CA GLU A 260 -19.452 44.659 58.553 1.00 34.19 C </line>
<line>ATOM 1960 CA GLU A 261 -20.906 45.413 62.053 1.00 29.08 C </line>
<line>ATOM 1969 CA LEU A 262 -17.539 46.673 63.222 1.00 15.57 C </line>
</atom-coordinate>
<distance-map>
<line> LEU GLU GLU ASP SER ASN LEU ASN CYS ASN LEU ASN ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 9.29 12.22 14.57 12.55 13.43 11.29 7.62 8.06 5.75 4.61 5.21 3.76 </line>
<line>ASN CA 11.58 14.61 17.01 15.48 16.66 14.83 11.11 10.89 7.70 5.49 3.85 </line>
<line>LEU CA 9.83 12.33 15.13 14.41 15.32 14.00 10.42 9.07 5.40 3.71 </line>
<line>ASN CA 9.51 11.38 14.61 13.56 13.61 11.72 8.41 6.68 3.67 </line>
<line>CYS CA 6.06 7.71 10.98 10.21 10.29 9.02 5.86 3.70 </line>
<line>ASN CA 5.63 5.89 9.25 8.25 7.22 5.76 3.72 </line>
<line>LEU CA 5.46 6.80 8.86 6.37 6.01 3.76 </line>
<line>ASN CA 7.47 7.11 8.46 5.96 3.67 </line>
<line>SER CA 6.69 5.17 5.34 3.82 </line>
<line>ASP CA 4.98 5.27 3.87 </line>
<line>GLU CA 5.43 3.86 </line>
<line>GLU CA 3.78 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>ARG CA 281</line>
<line>ASN CA 278</line>
<line>LEU CA 296</line>
<line>ASN CA 237</line>
<line>CYS CA 251</line>
<line>ASN CA 206</line>
<line>LEU CA 223</line>
<line>ASN CA 163</line>
<line>SER CA 180</line>
<line>ASP CA 259</line>
<line>GLU CA 252</line>
<line>GLU CA 259</line>
<line>LEU CA 332</line>
</n14>
</entryChain>
<parallel>
<x>47.45399856567383</x>
<y>-58.334999084472656</y>
<z>-120.0510025024414</z>
</parallel>
<rotation>
<x>-0.18799999356269836</x>
<y>0.3799999952316284</y>
<z>0.906000018119812</z>
<x>-0.9710000157356262</x>
<y>-0.20900000631809235</y>
<z>-0.11400000005960464</z>
<x>0.1469999998807907</x>
<y>-0.9010000228881836</y>
<z>0.4090000092983246</z>
</rotation>
<rmsd>0.7761179804801941</rmsd>
<dmax>1.2058910131454468</dmax>
</indel>