NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1A00A-2ZLWD
confEVID 1A00A-2ZLWD
pdbIDA 1A00
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.401399999856949
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFD------LSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG ------ HHHHHHHHHHHHHHHHHHH GGGHHHH HHHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1A00</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1A00A</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 93 CA TRP A 14 101.806 48.941 -17.540 1.00 24.13 C </line>
<line>ATOM 107 CA GLY A 15 104.329 49.426 -20.272 1.00 32.32 C </line>
<line>ATOM 111 CA LYS A 16 101.645 49.212 -23.026 1.00 38.40 C </line>
<line>ATOM 120 CA VAL A 17 99.483 51.612 -21.016 1.00 39.96 C </line>
<line>ATOM 127 CA GLY A 18 102.322 54.023 -21.279 1.00 35.04 C </line>
<line>ATOM 131 CA ALA A 19 101.383 57.501 -22.221 1.00 34.21 C </line>
<line>ATOM 136 CA HIS A 20 97.687 56.672 -21.842 1.00 27.27 C </line>
<line>ATOM 146 CA ALA A 21 97.984 56.116 -18.093 1.00 25.35 C </line>
<line>ATOM 151 CA GLY A 22 96.206 59.329 -17.013 1.00 21.87 C </line>
<line>ATOM 155 CA GLU A 23 93.304 58.738 -19.453 1.00 22.91 C </line>
<line>ATOM 164 CA TYR A 24 92.735 55.218 -18.085 1.00 19.66 C </line>
<line>ATOM 176 CA GLY A 25 93.027 56.701 -14.614 1.00 13.74 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.08 11.04 13.11 11.81 8.15 9.76 9.77 6.33 4.96 5.50 3.75 </line>
<line>GLY CA 14.58 13.14 14.45 13.22 9.47 9.95 8.81 5.12 5.37 3.85 </line>
<line>LYS CA 14.18 11.83 13.16 12.97 9.24 8.53 8.33 5.16 3.80 </line>
<line>VAL CA 10.42 8.19 9.56 9.29 5.57 5.43 6.30 3.73 </line>
<line>GLY CA 11.75 10.18 10.34 9.15 5.77 5.37 3.72 </line>
<line>ALA CA 11.33 9.85 8.63 7.57 5.52 3.81 </line>
<line>HIS CA 8.60 6.38 5.40 5.71 3.80 </line>
<line>ALA CA 6.08 5.33 5.53 3.83 </line>
<line>GLY CA 4.77 5.49 3.84 </line>
<line>GLU CA 5.26 3.82 </line>
<line>TYR CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 384</line>
<line>GLY CA 258</line>
<line>LYS CA 244</line>
<line>VAL CA 315</line>
<line>GLY CA 234</line>
<line>ALA CA 193</line>
<line>HIS CA 249</line>
<line>ALA CA 319</line>
<line>GLY CA 294</line>
<line>GLU CA 313</line>
<line>TYR CA 365</line>
<line>GLY CA 399</line>
</n14>
</entryChain>
<parallel>
<x>-136.74000549316406</x>
<y>-42.39099884033203</y>
<z>47.391998291015625</z>
</parallel>
<rotation>
<x>-0.37599998712539673</x>
<y>0.925000011920929</y>
<z>-0.052000001072883606</z>
<x>-0.36399999260902405</x>
<y>-0.09600000083446503</y>
<z>0.9259999990463257</z>
<x>0.8519999980926514</x>
<y>0.36800000071525574</y>
<z>0.37299999594688416</z>
</rotation>
<rmsd>1.6096739768981934</rmsd>
<dmax>3.4425699710845947</dmax>
</indel>