NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ADIB-1DJ3B
confEVID 1ADIB-1DJ3B
pdbIDA 1ADI
pdbIDB 1DJ3
pdbChainA B
pdbChainB B
identity 0.441300004720688
indelSize 2
alignment <alignment>
<seq1>-------GNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVIN-GEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA</seq1>
<seq2>ADRVSSLSNVSGVLGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILHEGTLCVVGNGAVIHVPGFFGEIDGLQSNGVSCDGRILVSDRAHLLFDLHQTVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFEDAAARF-EGFKYSKGMLKEEVERYKKFAERLEPFIADTVHVLNESIRQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTELLGEEGDVLRKAGMEFGTTTGRPRRCGWLDIVALKYCCDINGFSSLNLTKLDVLSGLPEIKLGVSYNQMDGEKLQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSELPQAARRYVERIEELAGVPVHYIGVGPGRDALIYK------</seq2>
<ss_1>------- EEEEEE HHHHHHH EEEE EEEE - EEEEE GGG EEEE HHHHHHHHHH EE HHHHHHHHHHHH GGG HHHHHHHH GGGG HHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHH EEEE GGG GGHHHH EEEEEE EEE HHHHHHHH EEEEEEHHHHHHHHHH EEEEE GGG EEEEEEEEEEE EEE HHHH EEEEEEE HHHHHHHHHHHHH EEEE EEE </ss_1>
<ss_2> EEEEEE HHHHHHHHGGG EEEE EEE EEEEE GGG EEEE EE HHHHHHHHHHHH EE EE HHHHHHHHHHHHH HHHHHHHHH GGGGG HHHHHHHHHHHHHHHHHH - HHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHH EEEE GGG HHHHH HHHH EEEEE EEE HHHHHHHHH EEEEE HHHHHHHHHH EEEEE GGGG EEE HHHGGG EEE HHHHHHHHHHHHH EEE EEE ------</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ADI</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1ADIB</entryIDChain>
<sequence>TLVIN-GEKTV</sequence>
<secondary-structure>EEE - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 4575 CA THR B 42 -1.506 22.462 -18.393 1.00 27.84 C </line>
<line>ATOM 4584 CA LEU B 43 -4.698 22.990 -16.345 1.00 31.30 C </line>
<line>ATOM 4593 CA VAL B 44 -8.212 21.507 -16.032 1.00 35.97 C </line>
<line>ATOM 4601 CA ILE B 45 -11.341 23.534 -16.889 1.00 41.37 C </line>
<line>ATOM 4610 CA ASN B 46 -14.289 21.506 -15.541 1.00 45.86 C </line>
<line>ATOM 4621 CA GLY B 47 -12.620 18.157 -16.297 1.00 49.03 C </line>
<line>ATOM 4626 CA GLU B 48 -10.888 19.073 -19.571 1.00 51.53 C </line>
<line>ATOM 4636 CA LYS B 49 -7.109 19.468 -20.099 1.00 48.08 C </line>
<line>ATOM 4649 CA THR B 50 -6.289 22.845 -21.704 1.00 41.64 C </line>
<line>ATOM 4658 CA VAL B 51 -2.850 24.432 -22.121 1.00 33.54 C </line>
</atom-coordinate>
<distance-map>
<line> VAL THR LYS GLU GLY ASN ILE VAL LEU THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.43 5.83 6.58 10.04 12.10 13.13 10.01 7.17 3.83 </line>
<line>LEU CA 6.23 5.59 5.68 8.00 9.28 9.74 6.69 3.83 </line>
<line>VAL CA 8.62 6.14 4.68 5.06 5.54 6.10 3.83 </line>
<line>ILE CA 10.01 7.01 6.69 5.22 5.56 3.82 </line>
<line>ASN CA 13.52 10.19 8.75 5.81 3.82 </line>
<line>GLY CA 12.99 9.55 6.82 3.82 </line>
<line>GLU CA 9.99 6.32 3.84 </line>
<line>LYS CA 6.85 3.83 </line>
<line>THR CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>THR CA 387</line>
<line>LEU CA 374</line>
<line>VAL CA 286</line>
<line>ILE CA 286</line>
<line>ASN CA 178</line>
<line>GLY CA 134</line>
<line>GLU CA 166</line>
<line>LYS CA 209</line>
<line>THR CA 302</line>
<line>VAL CA 373</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1DJ3</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1DJ3B</entryIDChain>
<sequence>TIYNSEGKKFA</sequence>
<secondary-structure>EE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 3636 CA THR B 59 112.658 53.605 49.331 1.00 27.09 C </line>
<line>ATOM 3643 CA ILE B 60 109.431 51.610 48.882 1.00 27.80 C </line>
<line>ATOM 3651 CA TYR B 61 107.996 48.278 50.143 1.00 30.64 C </line>
<line>ATOM 3663 CA ASN B 62 105.728 45.803 48.350 1.00 41.47 C </line>
<line>ATOM 3671 CA SER B 63 102.879 43.649 49.702 1.00 46.95 C </line>
<line>ATOM 3677 CA GLU B 64 105.172 41.084 51.372 1.00 48.80 C </line>
<line>ATOM 3686 CA GLY B 65 107.163 43.886 52.986 1.00 34.35 C </line>
<line>ATOM 3690 CA LYS B 66 110.209 43.587 50.719 1.00 39.09 C </line>
<line>ATOM 3699 CA LYS B 67 112.522 46.614 50.717 1.00 31.76 C </line>
<line>ATOM 3708 CA PHE B 68 113.306 48.342 47.406 1.00 36.60 C </line>
<line>ATOM 3719 CA ALA B 69 115.683 51.260 46.877 1.00 39.07 C </line>
</atom-coordinate>
<distance-map>
<line> ALA PHE LYS LYS GLY GLU SER ASN TYR ILE THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.55 5.64 7.13 10.41 11.75 14.73 13.96 10.48 7.13 3.82 </line>
<line>ILE CA 6.57 5.28 6.15 8.27 9.04 11.62 10.34 6.91 3.84 </line>
<line>TYR CA 8.87 5.97 4.86 5.22 5.30 7.83 6.91 3.81 </line>
<line>ASN CA 11.45 8.05 7.24 5.53 5.22 5.63 3.82 </line>
<line>SER CA 15.16 11.66 10.14 7.40 5.40 3.82 </line>
<line>GLU CA 15.30 11.60 9.22 5.66 3.80 </line>
<line>GLY CA 12.82 9.42 6.43 3.81 </line>
<line>LYS CA 10.18 6.57 3.81 </line>
<line>LYS CA 6.81 3.82 </line>
<line>PHE CA 3.80 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>THR CA 405</line>
<line>ILE CA 396</line>
<line>TYR CA 302</line>
<line>ASN CA 279</line>
<line>SER CA 215</line>
<line>GLU CA 146</line>
<line>GLY CA 184</line>
<line>LYS CA 208</line>
<line>LYS CA 252</line>
<line>PHE CA 343</line>
<line>ALA CA 364</line>
</n14>
</entryChain>
<parallel>
<x>-117.40599822998047</x>
<y>-26.04199981689453</y>
<z>-67.5</z>
</parallel>
<rotation>
<x>0.5460000038146973</x>
<y>-0.335999995470047</y>
<z>-0.7680000066757202</z>
<x>0.8339999914169312</x>
<y>0.30799999833106995</y>
<z>0.4580000042915344</z>
<x>0.0820000022649765</x>
<y>-0.8899999856948853</y>
<z>0.4480000138282776</z>
</rotation>
<rmsd>0.6317909955978394</rmsd>
<dmax>1.226585030555725</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1DJ3</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1DJ3B</entryIDChain>
<sequence>AAARF-EGFKY</sequence>
<secondary-structure>HHHH - </secondary-structure>
<atom-coordinate>
<line>ATOM 4599 CA ALA B 186 138.261 68.553 31.649 1.00 65.96 C </line>
<line>ATOM 4604 CA ALA B 187 141.981 67.945 31.085 1.00 69.59 C </line>
<line>ATOM 4609 CA ALA B 188 142.625 71.614 30.298 1.00 63.97 C </line>
<line>ATOM 4614 CA ARG B 189 140.959 72.531 33.587 1.00 63.28 C </line>
<line>ATOM 4625 CA PHE B 190 142.367 70.070 36.133 1.00 85.81 C </line>
<line>ATOM 4636 CA GLU B 191 145.988 68.911 36.039 1.00 92.18 C </line>
<line>ATOM 4645 CA GLY B 192 144.691 65.834 37.845 1.00 95.06 C </line>
<line>ATOM 4649 CA PHE B 193 143.395 64.651 34.468 1.00 94.86 C </line>
<line>ATOM 4660 CA LYS B 194 145.549 63.630 31.495 1.00100.00 C </line>
<line>ATOM 4669 CA TYR B 195 143.143 61.911 29.086 1.00 95.67 C </line>
</atom-coordinate>
<distance-map>
<line> TYR LYS PHE GLY GLU PHE ARG ALA ALA ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 8.63 8.80 7.04 9.33 8.89 6.27 5.18 5.50 3.81 </line>
<line>ALA CA 6.46 5.61 4.93 7.58 6.44 5.49 5.32 3.81 </line>
<line>ALA CA 9.79 8.59 8.15 9.73 7.18 6.04 3.80 </line>
<line>ARG CA 11.74 10.23 8.29 8.77 6.66 3.81 </line>
<line>PHE CA 10.81 8.55 5.76 5.13 3.80 </line>
<line>GLU CA 10.27 6.98 5.23 3.80 </line>
<line>GLY CA 9.72 6.78 3.81 </line>
<line>PHE CA 6.04 3.81 </line>
<line>LYS CA 3.81 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ALA CA 325</line>
<line>ALA CA 251</line>
<line>ALA CA 184</line>
<line>ARG CA 220</line>
<line>PHE CA 219</line>
<line>GLU CA 169</line>
<line>GLY CA 195</line>
<line>PHE CA 245</line>
<line>LYS CA 196</line>
<line>TYR CA 252</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ADI</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1ADIB</entryIDChain>
<sequence>HNFQLVNYYKA</sequence>
<secondary-structure>HHHHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 5776 CA HIS B 168 12.607 40.865 -43.845 1.00 23.39 C </line>
<line>ATOM 5788 CA ASN B 169 11.056 39.764 -47.168 1.00 20.27 C </line>
<line>ATOM 5799 CA PHE B 170 14.421 40.612 -48.689 1.00 20.44 C </line>
<line>ATOM 5811 CA GLN B 171 15.995 37.947 -46.446 1.00 20.35 C </line>
<line>ATOM 5823 CA LEU B 172 13.204 35.450 -46.813 1.00 14.49 C </line>
<line>ATOM 5832 CA VAL B 173 13.313 35.358 -50.590 1.00 15.09 C </line>
<line>ATOM 5840 CA ASN B 174 16.981 36.231 -51.262 1.00 21.21 C </line>
<line>ATOM 5851 CA TYR B 175 19.017 34.341 -48.616 1.00 23.28 C </line>
<line>ATOM 5865 CA TYR B 176 16.752 31.680 -47.233 1.00 19.50 C </line>
<line>ATOM 5879 CA LYS B 177 15.033 31.142 -50.616 1.00 21.95 C </line>
<line>ATOM 5892 CA ALA B 178 11.657 31.018 -48.836 1.00 20.10 C </line>
</atom-coordinate>
<distance-map>
<line> ALA LYS TYR TYR ASN VAL LEU GLN PHE ASN HIS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>HIS CA 11.08 12.09 10.63 10.32 9.78 8.74 6.20 5.17 5.18 3.83 </line>
<line>ASN CA 8.92 10.10 9.89 9.74 8.02 6.02 4.83 5.31 3.79 </line>
<line>PHE CA 9.99 9.68 9.35 7.78 5.69 5.70 5.63 3.82 </line>
<line>GLN CA 8.52 8.04 6.36 5.18 5.21 5.57 3.76 </line>
<line>LEU CA 5.11 6.03 5.19 6.19 5.89 3.78 </line>
<line>VAL CA 4.97 4.55 6.05 6.12 3.83 </line>
<line>ASN CA 7.84 5.49 6.08 3.84 </line>
<line>TYR CA 8.08 5.49 3.76 </line>
<line>TYR CA 5.38 3.83 </line>
<line>LYS CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>HIS CA 439</line>
<line>ASN CA 386</line>
<line>PHE CA 290</line>
<line>GLN CA 333</line>
<line>LEU CA 364</line>
<line>VAL CA 274</line>
<line>ASN CA 216</line>
<line>TYR CA 243</line>
<line>TYR CA 279</line>
<line>LYS CA 238</line>
<line>ALA CA 273</line>
</n14>
</entryChain>
<parallel>
<x>127.52899932861328</x>
<y>31.652000427246094</y>
<z>81.39700317382812</z>
</parallel>
<rotation>
<x>0.11999999731779099</x>
<y>0.39399999380111694</y>
<z>0.9110000133514404</z>
<x>-0.22599999606609344</x>
<y>0.9049999713897705</y>
<z>-0.3610000014305115</z>
<x>-0.9670000076293945</x>
<y>-0.16200000047683716</y>
<z>0.1979999989271164</z>
</rotation>
<rmsd>2.7708959579467773</rmsd>
<dmax>4.818333148956299</dmax>
</indel>