NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AHQA-2I2QA
confEVID 1AHQA-2I2QA
pdbIDA 1AHQ
pdbIDB 2I2Q
pdbChainA A
pdbChainB A
identity 0.516700029373169
indelSize 1
alignment <alignment>
<seq1>---GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAKK</seq1>
<seq2>SFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEKKS-TDKDFDTFLGDLPEKDCRYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFS-------------</seq2>
<ss_1>--- HHHHHHHHHHH EEEEEEEE EEE EEE HHHHHH EEEEEEE EEEEE HHHHHHHH HHHHHHH EEEEE HHHH HHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHH EEEEEEEE EEE EEE- HHHHGGG EEEEEEEEE EEEEEEEEE HHHHHHHHHHHHHGGG EEE -------------</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2I2Q</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2I2QA</entryIDChain>
<sequence>VEKKS-TDKDF</sequence>
<secondary-structure> EEE- H</secondary-structure>
<atom-coordinate>
<line>ATOM 311 CA VAL A 41 16.634 -40.754 -58.086 1.00 22.72 C </line>
<line>ATOM 318 CA GLU A 42 19.418 -39.894 -60.513 1.00 23.95 C </line>
<line>ATOM 327 CA LYS A 43 22.124 -42.033 -58.947 1.00 25.29 C </line>
<line>ATOM 336 CA LYS A 44 22.802 -44.364 -56.041 1.00 25.01 C </line>
<line>ATOM 345 CA SER A 45 26.116 -45.907 -55.073 1.00 24.73 C </line>
<line>ATOM 351 CA THR A 46 27.857 -48.174 -52.581 1.00 27.67 C </line>
<line>ATOM 358 CA ASP A 47 31.259 -46.593 -53.288 1.00 30.15 C </line>
<line>ATOM 366 CA LYS A 48 32.827 -45.314 -50.058 1.00 32.73 C </line>
<line>ATOM 375 CA ASP A 49 35.246 -42.969 -51.838 1.00 30.71 C </line>
<line>ATOM 383 CA PHE A 50 34.143 -39.345 -51.357 1.00 27.97 C </line>
</atom-coordinate>
<distance-map>
<line> PHE ASP LYS ASP THR SER LYS LYS GLU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 18.81 19.76 18.64 16.46 14.54 11.20 7.43 5.70 3.79 </line>
<line>GLU CA 17.35 18.31 17.85 15.40 14.24 10.52 7.17 3.79 </line>
<line>LYS CA 14.47 14.95 14.29 11.67 10.54 6.78 3.79 </line>
<line>LYS CA 13.26 13.21 11.71 9.17 7.21 3.78 </line>
<line>SER CA 11.01 10.12 8.40 5.49 3.79 </line>
<line>THR CA 10.91 9.07 6.26 3.82 </line>
<line>ASP CA 8.04 5.58 3.81 </line>
<line>LYS CA 6.25 3.81 </line>
<line>ASP CA 3.82 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>VAL CA 362</line>
<line>GLU CA 327</line>
<line>LYS CA 338</line>
<line>LYS CA 353</line>
<line>SER CA 301</line>
<line>THR CA 262</line>
<line>ASP CA 233</line>
<line>LYS CA 249</line>
<line>ASP CA 194</line>
<line>PHE CA 244</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AHQ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AHQA</entryIDChain>
<sequence>VEHVGGPNATY</sequence>
<secondary-structure> EEE H</secondary-structure>
<atom-coordinate>
<line>ATOM 355 CA VAL A 38 7.186 18.836 -3.651 1.00 5.52 C </line>
<line>ATOM 363 CA GLU A 39 8.108 15.154 -3.935 1.00 7.82 C </line>
<line>ATOM 373 CA HIS A 40 10.673 14.131 -1.309 1.00 4.42 C </line>
<line>ATOM 386 CA VAL A 41 11.430 15.876 1.930 1.00 5.96 C </line>
<line>ATOM 394 CA GLY A 42 14.830 14.705 3.069 1.00 8.95 C </line>
<line>ATOM 399 CA GLY A 43 15.298 15.042 6.817 1.00 10.47 C </line>
<line>ATOM 404 CA PRO A 44 18.524 16.400 8.324 1.00 7.20 C </line>
<line>ATOM 411 CA ASN A 45 20.259 12.993 8.584 1.00 18.53 C </line>
<line>ATOM 422 CA ALA A 46 19.482 11.777 5.067 1.00 2.12 C </line>
<line>ATOM 428 CA THR A 47 22.606 11.217 3.008 1.00 4.39 C </line>
<line>ATOM 437 CA TYR A 48 23.438 12.389 -0.518 1.00 2.78 C </line>
</atom-coordinate>
<distance-map>
<line> TYR THR ALA ASN PRO GLY GLY VAL HIS GLU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 17.76 18.44 16.64 18.83 16.67 13.78 10.98 7.61 6.31 3.81 </line>
<line>GLU CA 15.95 16.55 14.89 17.58 16.13 12.93 9.72 6.78 3.81 </line>
<line>HIS CA 12.91 13.02 11.13 13.82 12.63 9.39 6.06 3.76 </line>
<line>VAL CA 12.74 12.16 9.56 11.43 9.56 6.29 3.77 </line>
<line>GLY CA 9.61 8.52 5.85 7.93 6.64 3.79 </line>
<line>GLY CA 11.27 9.09 5.59 5.65 3.81 </line>
<line>PRO CA 10.88 8.47 5.74 3.83 </line>
<line>ASN CA 9.66 6.31 3.80 </line>
<line>ALA CA 6.87 3.78 </line>
<line>THR CA 3.81 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>VAL CA 446</line>
<line>GLU CA 416</line>
<line>HIS CA 433</line>
<line>VAL CA 424</line>
<line>GLY CA 415</line>
<line>GLY CA 322</line>
<line>PRO CA 307</line>
<line>ASN CA 244</line>
<line>ALA CA 300</line>
<line>THR CA 328</line>
<line>TYR CA 421</line>
</n14>
</entryChain>
<parallel>
<x>11.067999839782715</x>
<y>-59.112998962402344</y>
<z>-57.83300018310547</z>
</parallel>
<rotation>
<x>0.5180000066757202</x>
<y>0.17800000309944153</y>
<z>0.8370000123977661</z>
<x>-0.7570000290870667</x>
<y>-0.36000001430511475</y>
<z>0.5450000166893005</z>
<x>0.39800000190734863</x>
<y>-0.9160000085830688</y>
<z>-0.052000001072883606</z>
</rotation>
<rmsd>1.7782609462738037</rmsd>
<dmax>3.13755202293396</dmax>
</indel>