NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AIBA-2AY1B
confEVID 1AIBA-2AY1B
pdbIDA 1AIB
pdbIDB 2AY1
pdbChainA A
pdbChainB B
identity 0.431100010871887
indelSize 3
alignment <alignment>
<seq1>MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSHNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI---IKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL-</seq1>
<seq2>MLGNLKPQAPDKILALMGEF------GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSE---TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDL---SGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVGV</seq2>
<ss_1> HHHHHHGGG HHHHHHHHHHHHH HHHHHHHHHH HHHH EEEEEEE HHHHHHHHHHHHH EEEE HHHHHH EEEEEEEEE EEEHHHHHHH EEEE HHHHHHHHHHHHH EEEEEE GGGHHHHHHHHH EEEEEEE GGG EEEEEE HHHHHHHHHHHHHHHH HHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGG--- HHHHHHHHH EE EEEEEGG HHHHHHHHHH -</ss_1>
<ss_2> HHHHHHHH ------ HHHHHHHHHHHHH HHHHHHHHHHHHGGG GG---EEEEEEE HHHHHHHHHHHHHHHH EEE HHHHHHH EEE EE EEHHHHHHHGGG EEEE HHHHHHHHHHHHH EEEEEE HHHHHHHHHH EEEEEEE GGG EEEEEEE HHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH --- GGG HHHH HHHHHHHH EEEE EEEEEGG HHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AIB</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AIBA</entryIDChain>
<sequence>DFSFI---IKQNG</sequence>
<secondary-structure> GGG--- </secondary-structure>
<atom-coordinate>
<line>ATOM 2614 CA ASP A 349 23.941 5.157 24.079 1.00 38.19 C </line>
<line>ATOM 2622 CA PHE A 350 21.924 8.128 22.949 1.00 34.61 C </line>
<line>ATOM 2633 CA SER A 351 18.984 6.109 21.657 1.00 20.64 C </line>
<line>ATOM 2639 CA PHE A 352 16.624 7.833 24.070 1.00 14.11 C </line>
<line>ATOM 2650 CA ILE A 353 16.829 10.923 21.768 1.00 11.56 C </line>
<line>ATOM 2658 CA ILE A 354 14.371 9.037 19.506 1.00 17.48 C </line>
<line>ATOM 2666 CA LYS A 355 11.767 8.344 22.162 1.00 34.86 C </line>
<line>ATOM 2675 CA GLN A 356 11.257 12.060 22.780 1.00 25.64 C </line>
<line>ATOM 2684 CA ASN A 357 9.126 14.700 20.995 1.00 16.29 C </line>
<line>ATOM 2692 CA GLY A 358 9.048 17.997 19.218 1.00 20.26 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ASN GLN LYS ILE ILE PHE SER PHE ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 20.26 17.89 14.50 12.73 11.29 9.44 7.79 5.60 3.76 </line>
<line>PHE CA 16.65 14.52 11.37 10.19 8.35 5.93 5.43 3.79 </line>
<line>SER CA 15.68 13.09 9.82 7.57 5.87 5.28 3.79 </line>
<line>PHE CA 13.57 10.62 6.95 5.24 5.23 3.86 </line>
<line>ILE CA 10.82 8.61 5.78 5.69 3.84 </line>
<line>ILE CA 10.43 7.86 5.44 3.78 </line>
<line>LYS CA 10.45 6.98 3.80 </line>
<line>GLN CA 7.27 3.83 </line>
<line>ASN CA 3.75 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>ASP CA 260</line>
<line>PHE CA 355</line>
<line>SER CA 294</line>
<line>PHE CA 338</line>
<line>ILE CA 427</line>
<line>ILE CA 350</line>
<line>LYS CA 343</line>
<line>GLN CA 453</line>
<line>ASN CA 493</line>
<line>GLY CA 530</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2AY1</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2AY1B</entryIDChain>
<sequence>GSDRFGFVAEHRG</sequence>
<secondary-structure> GGG HHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 5449 CA GLY B 346 117.268 73.366 23.622 1.00 60.42 C </line>
<line>ATOM 5453 CA SER B 347 116.320 70.064 25.217 1.00 59.60 C </line>
<line>ATOM 5459 CA ASP B 348 118.856 67.466 24.093 1.00 57.62 C </line>
<line>ATOM 5467 CA ARG B 349 116.536 64.939 25.796 1.00 53.83 C </line>
<line>ATOM 5478 CA PHE B 350 115.033 64.061 22.405 1.00 49.55 C </line>
<line>ATOM 5489 CA GLY B 351 118.313 62.916 20.870 1.00 44.99 C </line>
<line>ATOM 5493 CA PHE B 352 117.332 59.246 21.193 1.00 40.75 C </line>
<line>ATOM 5504 CA VAL B 353 115.142 59.821 18.123 1.00 38.65 C </line>
<line>ATOM 5511 CA ALA B 354 118.138 59.876 15.773 1.00 36.69 C </line>
<line>ATOM 5516 CA GLU B 355 119.706 57.016 17.737 1.00 35.62 C </line>
<line>ATOM 5525 CA HIS B 356 116.766 54.635 17.327 1.00 33.34 C </line>
<line>ATOM 5535 CA ARG B 357 116.944 52.421 14.255 1.00 33.64 C </line>
<line>ATOM 5546 CA GLY B 358 113.994 51.256 12.184 1.00 33.50 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ARG HIS GLU ALA VAL PHE GLY PHE ARG ASP SER GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 25.11 22.95 19.77 17.55 15.63 14.77 14.33 10.86 9.65 8.73 6.13 3.79 </line>
<line>SER CA 23.00 20.78 17.34 15.42 14.01 12.52 11.59 8.60 6.75 5.16 3.80 </line>
<line>ASP CA 20.69 18.08 14.66 12.26 11.28 10.39 8.85 5.60 5.39 3.83 </line>
<line>ARG CA 19.47 17.03 13.34 11.74 11.34 9.33 7.36 5.61 3.81 </line>
<line>PHE CA 16.42 14.34 10.85 9.66 8.43 6.03 5.47 3.80 </line>
<line>GLY CA 15.17 12.48 9.14 6.82 5.94 5.21 3.81 </line>
<line>PHE CA 12.50 9.74 6.04 4.75 5.52 3.81 </line>
<line>VAL CA 10.49 8.54 5.49 5.37 3.81 </line>
<line>ALA CA 10.22 7.70 5.64 3.81 </line>
<line>GLU CA 9.83 6.39 3.81 </line>
<line>HIS CA 6.75 3.79 </line>
<line>ARG CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>GLY CA 150</line>
<line>SER CA 203</line>
<line>ASP CA 218</line>
<line>ARG CA 260</line>
<line>PHE CA 359</line>
<line>GLY CA 314</line>
<line>PHE CA 364</line>
<line>VAL CA 442</line>
<line>ALA CA 355</line>
<line>GLU CA 347</line>
<line>HIS CA 449</line>
<line>ARG CA 456</line>
<line>GLY CA 513</line>
</n14>
</entryChain>
<parallel>
<x>-100.36599731445312</x>
<y>-55.479000091552734</y>
<z>0.875</z>
</parallel>
<rotation>
<x>-0.3799999952316284</x>
<y>-0.925000011920929</y>
<z>-0.026000000536441803</z>
<x>0.8889999985694885</x>
<y>-0.3569999933242798</y>
<z>-0.28600001335144043</z>
<x>0.2549999952316284</x>
<y>-0.13199999928474426</y>
<z>0.9580000042915344</z>
</rotation>
<rmsd>3.0809009075164795</rmsd>
<dmax>3.898782968521118</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2AY1</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2AY1B</entryIDChain>
<sequence>GLKSE---TTATL</sequence>
<secondary-structure>G GG---EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 3592 CA GLY B 91 126.381 30.682 7.294 1.00 28.66 C </line>
<line>ATOM 3596 CA LEU B 95 123.595 28.633 5.696 1.00 29.04 C </line>
<line>ATOM 3604 CA LYS B 96 124.124 24.935 6.431 1.00 29.64 C </line>
<line>ATOM 3613 CA SER B 97 121.463 23.278 4.289 1.00 30.00 C </line>
<line>ATOM 3619 CA GLU B 98 122.188 19.833 5.749 1.00 31.10 C </line>
<line>ATOM 3628 CA THR B 99 120.962 21.086 9.142 1.00 28.93 C </line>
<line>ATOM 3635 CA THR B 100 118.404 23.680 8.032 1.00 25.50 C </line>
<line>ATOM 3642 CA ALA B 101 114.672 23.134 7.544 1.00 22.05 C </line>
<line>ATOM 3647 CA THR B 102 112.598 25.786 5.784 1.00 19.08 C </line>
<line>ATOM 3654 CA LEU B 103 108.837 26.333 5.659 1.00 14.59 C </line>
</atom-coordinate>
<distance-map>
<line> LEU THR ALA THR THR GLU SER LYS LEU GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 18.15 14.70 13.93 10.64 11.17 11.73 9.38 6.23 3.81 </line>
<line>LEU CA 14.94 11.36 10.64 7.55 8.70 8.91 5.93 3.81 </line>
<line>LYS CA 15.37 11.58 9.69 6.07 5.67 5.50 3.80 </line>
<line>SER CA 13.06 9.33 7.53 4.85 5.35 3.81 </line>
<line>GLU CA 14.85 11.29 8.40 5.86 3.82 </line>
<line>THR CA 13.66 10.16 6.81 3.81 </line>
<line>THR CA 10.21 6.57 3.80 </line>
<line>ALA CA 6.92 3.80 </line>
<line>THR CA 3.80 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>GLY CA 271</line>
<line>LEU CA 303</line>
<line>LYS CA 279</line>
<line>SER CA 281</line>
<line>GLU CA 215</line>
<line>THR CA 273</line>
<line>THR CA 371</line>
<line>ALA CA 413</line>
<line>THR CA 475</line>
<line>LEU CA 494</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AIB</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AIBA</entryIDChain>
<sequence>GSALINDKRARTA</sequence>
<secondary-structure> HHHH EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 659 CA GLY A 91 -17.930 16.883 17.986 1.00 35.20 C </line>
<line>ATOM 663 CA SER A 92 -16.841 17.630 21.594 1.00 34.17 C </line>
<line>ATOM 669 CA ALA A 93 -19.559 17.847 24.126 1.00 21.83 C </line>
<line>ATOM 674 CA LEU A 94 -17.604 20.758 25.633 1.00 32.64 C </line>
<line>ATOM 682 CA ILE A 95 -18.283 22.625 22.449 1.00 25.01 C </line>
<line>ATOM 690 CA ASN A 96 -21.846 21.461 21.918 1.00 19.62 C </line>
<line>ATOM 698 CA ASP A 97 -22.931 22.202 25.491 1.00 15.22 C </line>
<line>ATOM 706 CA LYS A 98 -21.171 25.576 25.224 1.00 25.80 C </line>
<line>ATOM 715 CA ARG A 99 -18.896 24.915 28.297 1.00 17.29 C </line>
<line>ATOM 726 CA ALA A 100 -15.727 26.401 26.877 1.00 9.53 C </line>
<line>ATOM 731 CA ARG A 101 -14.778 30.040 26.114 1.00 6.95 C </line>
<line>ATOM 742 CA THR A 102 -11.708 31.200 24.225 1.00 13.40 C </line>
<line>ATOM 749 CA ALA A 103 -10.008 34.584 24.359 1.00 2.00 C </line>
</atom-coordinate>
<distance-map>
<line> ALA THR ARG ALA ARG LYS ASP ASN ILE LEU ALA SER GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 20.41 16.81 15.78 13.21 13.11 11.77 10.47 7.19 7.28 8.58 6.43 3.84 </line>
<line>SER CA 18.49 14.74 13.37 10.30 10.11 9.75 8.55 6.31 5.27 5.17 3.72 </line>
<line>ALA CA 19.27 15.49 13.25 9.77 8.23 7.97 5.67 4.81 5.22 3.82 </line>
<line>LEU CA 15.83 12.07 9.71 6.08 5.10 6.01 5.52 5.68 3.75 </line>
<line>ILE CA 14.67 10.95 8.98 6.36 6.31 4.97 5.57 3.79 </line>
<line>ASN CA 17.84 14.25 11.88 9.30 7.83 5.32 3.81 </line>
<line>ASP CA 17.93 14.44 11.33 8.45 5.61 3.81 </line>
<line>LYS CA 14.37 11.05 7.85 5.75 3.88 </line>
<line>ARG CA 13.71 10.38 6.93 3.78 </line>
<line>ALA CA 10.30 6.80 3.84 </line>
<line>ARG CA 6.82 3.79 </line>
<line>THR CA 3.79 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLY CA 185</line>
<line>SER CA 260</line>
<line>ALA CA 240</line>
<line>LEU CA 335</line>
<line>ILE CA 314</line>
<line>ASN CA 207</line>
<line>ASP CA 212</line>
<line>LYS CA 280</line>
<line>ARG CA 329</line>
<line>ALA CA 431</line>
<line>ARG CA 453</line>
<line>THR CA 515</line>
<line>ALA CA 501</line>
</n14>
</entryChain>
<parallel>
<x>138.92599487304688</x>
<y>2.2699999809265137</y>
<z>-17.36199951171875</z>
</parallel>
<rotation>
<x>-0.6579999923706055</x>
<y>0.5070000290870667</y>
<z>-0.5569999814033508</z>
<x>-0.7350000143051147</x>
<y>-0.2680000066757202</y>
<z>0.6230000257492065</z>
<x>-0.16599999368190765</x>
<y>-0.8190000057220459</y>
<z>-0.5490000247955322</z>
</rotation>
<rmsd>2.878514051437378</rmsd>
<dmax>6.052309989929199</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2AY1</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2AY1B</entryIDChain>
<sequence>ELRDL---SGSDR</sequence>
<secondary-structure>HHH --- GG</secondary-structure>
<atom-coordinate>
<line>ATOM 5399 CA GLU B 340 113.520 70.425 15.089 1.00 51.09 C </line>
<line>ATOM 5408 CA LEU B 341 112.835 69.265 18.658 1.00 54.21 C </line>
<line>ATOM 5416 CA ARG B 342 116.304 70.335 19.785 1.00 57.43 C </line>
<line>ATOM 5427 CA ASP B 343 115.994 73.801 18.234 1.00 59.49 C </line>
<line>ATOM 5435 CA LEU B 344 112.522 74.086 19.792 1.00 60.09 C </line>
<line>ATOM 5443 CA SER B 345 113.503 73.809 23.467 1.00 60.63 C </line>
<line>ATOM 5449 CA GLY B 346 117.268 73.366 23.622 1.00 60.42 C </line>
<line>ATOM 5453 CA SER B 347 116.320 70.064 25.217 1.00 59.60 C </line>
<line>ATOM 5459 CA ASP B 348 118.856 67.466 24.093 1.00 57.62 C </line>
<line>ATOM 5467 CA ARG B 349 116.536 64.939 25.796 1.00 53.83 C </line>
</atom-coordinate>
<distance-map>
<line> ARG ASP SER GLY SER LEU ASP ARG LEU GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 12.40 10.88 10.51 9.77 9.04 6.04 5.24 5.46 3.81 </line>
<line>LEU CA 9.13 8.31 7.47 7.82 6.65 4.96 5.54 3.80 </line>
<line>ARG CA 8.08 5.77 5.44 4.98 5.79 5.33 3.81 </line>
<line>ASP CA 11.66 9.09 7.93 5.55 5.80 3.82 </line>
<line>LEU CA 11.65 10.12 7.75 6.14 3.81 </line>
<line>SER CA 9.66 8.32 5.00 3.79 </line>
<line>GLY CA 8.73 6.13 3.79 </line>
<line>SER CA 5.16 3.80 </line>
<line>ASP CA 3.83 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>GLU CA 301</line>
<line>LEU CA 323</line>
<line>ARG CA 248</line>
<line>ASP CA 194</line>
<line>LEU CA 221</line>
<line>SER CA 195</line>
<line>GLY CA 150</line>
<line>SER CA 203</line>
<line>ASP CA 218</line>
<line>ARG CA 260</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AIB</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AIBA</entryIDChain>
<sequence>TLQEKGANRDFSF</sequence>
<secondary-structure>HHHH GG</secondary-structure>
<atom-coordinate>
<line>ATOM 2544 CA THR A 340 25.941 9.991 13.308 1.00 31.14 C </line>
<line>ATOM 2551 CA LEU A 341 26.817 9.945 17.010 1.00 37.52 C </line>
<line>ATOM 2559 CA GLN A 342 27.143 6.124 17.125 1.00 30.22 C </line>
<line>ATOM 2568 CA GLU A 343 29.310 6.230 13.990 1.00 47.23 C </line>
<line>ATOM 2577 CA LYS A 344 31.601 9.098 15.116 1.00 48.39 C </line>
<line>ATOM 2586 CA GLY A 345 32.596 7.015 18.098 1.00 40.21 C </line>
<line>ATOM 2590 CA ALA A 346 29.949 7.877 20.745 1.00 43.00 C </line>
<line>ATOM 2595 CA ASN A 347 30.858 6.274 23.860 1.00 58.25 C </line>
<line>ATOM 2603 CA ARG A 348 27.258 6.483 25.191 1.00 42.46 C </line>
<line>ATOM 2614 CA ASP A 349 23.941 5.157 24.079 1.00 38.19 C </line>
<line>ATOM 2622 CA PHE A 350 21.924 8.128 22.949 1.00 34.61 C </line>
<line>ATOM 2633 CA SER A 351 18.984 6.109 21.657 1.00 20.64 C </line>
<line>ATOM 2639 CA PHE A 352 16.624 7.833 24.070 1.00 14.11 C </line>
</atom-coordinate>
<distance-map>
<line> PHE SER PHE ASP ARG ASN ALA GLY LYS GLU GLN LEU THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 14.40 11.54 10.61 11.97 12.46 12.22 8.71 8.72 6.01 5.10 5.56 3.80 </line>
<line>LEU CA 12.58 9.88 7.91 9.01 8.89 8.76 5.29 6.57 5.21 5.40 3.84 </line>
<line>GLN CA 12.72 9.33 8.07 7.72 8.07 7.69 4.90 5.61 5.72 3.81 </line>
<line>GLU CA 16.28 12.86 11.77 11.48 11.39 9.99 6.98 5.32 3.84 </line>
<line>LYS CA 17.50 14.52 12.49 12.43 11.28 9.22 5.99 3.77 </line>
<line>GLY CA 17.07 14.10 11.78 10.68 8.89 6.06 3.84 </line>
<line>ALA CA 13.73 11.14 8.33 7.39 5.38 3.62 </line>
<line>ASN CA 14.32 12.08 9.17 7.01 3.84 </line>
<line>ARG CA 10.78 9.00 6.02 3.74 </line>
<line>ASP CA 7.79 5.60 3.76 </line>
<line>PHE CA 5.43 3.79 </line>
<line>SER CA 3.79 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>THR CA 289</line>
<line>LEU CA 331</line>
<line>GLN CA 247</line>
<line>GLU CA 200</line>
<line>LYS CA 222</line>
<line>GLY CA 201</line>
<line>ALA CA 253</line>
<line>ASN CA 203</line>
<line>ARG CA 245</line>
<line>ASP CA 260</line>
<line>PHE CA 355</line>
<line>SER CA 294</line>
<line>PHE CA 338</line>
</n14>
</entryChain>
<parallel>
<x>88.04100036621094</x>
<y>64.2490005493164</y>
<z>1.8869999647140503</z>
</parallel>
<rotation>
<x>-0.5540000200271606</x>
<y>0.7990000247955322</y>
<z>-0.23199999332427979</z>
<x>-0.8240000009536743</x>
<y>-0.5669999718666077</y>
<z>0.014000000432133675</z>
<x>-0.11999999731779099</x>
<y>0.19900000095367432</y>
<z>0.9729999899864197</z>
</rotation>
<rmsd>2.743680000305176</rmsd>
<dmax>3.9932758808135986</dmax>
</indel>