NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AIJM-2UWSL
confEVID 1AIJM-2UWSL
pdbIDA 1AIJ
pdbIDB 2UWS
pdbChainA M
pdbChainB L
identity 0.282900005578995
indelSize 3
alignment <alignment>
<seq1>AEYQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADR----GTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDN----WYVWGQNH------------</seq1>
<seq2>-----ALLSFE--------------RKYRVPGG--TLVGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWNP-------QLISVYPPALEYGLGG-APLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLS------------AANPEKGKEMRTPDEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGING</seq2>
<ss_1> GGG HHHHHHHHHHHHHHHHHHHHHHHH HHHHHH HHHH HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHIIIIHHHHH GGG HHHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHH ---- HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHH ----HHHHHH ------------</ss_1>
<ss_2>----- -------------- -- EEE HHHHHHHHHHHHHHHHHHHHHHH H-------HHH GGG - HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHH HHHHHHHHIIIIHHHHH GGG HHHHHHHHHHGGG GGG HHHHHHHHHHHHHHHHHHHHHHHHHH------------HH HHHHH HHHHHHHHHHHHHHHHHHHHHH GGGGGHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>M</pdbChain>
<entryIDChain>1AIJM</entryIDChain>
<sequence>TVVDN----WYVWG</sequence>
<secondary-structure> ----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 4524 CA THR M 289 45.252 112.669 58.253 1.00 23.05 C </line>
<line>ATOM 4531 CA VAL M 290 43.011 114.493 55.752 1.00 28.44 C </line>
<line>ATOM 4538 CA VAL M 291 41.647 111.800 53.442 1.00 22.60 C </line>
<line>ATOM 4545 CA ASP M 292 40.617 108.374 54.787 1.00 32.15 C </line>
<line>ATOM 4553 CA ASN M 293 39.433 107.005 51.440 1.00 25.47 C </line>
<line>ATOM 4561 CA TRP M 294 40.764 108.334 48.139 1.00 27.36 C </line>
<line>ATOM 4575 CA TYR M 295 37.936 106.791 46.079 1.00 23.63 C </line>
<line>ATOM 4587 CA VAL M 296 35.473 108.758 48.207 1.00 23.67 C </line>
<line>ATOM 4594 CA TRP M 297 37.591 111.923 47.926 1.00 21.87 C </line>
<line>ATOM 4608 CA GLY M 298 37.741 111.385 44.151 1.00 26.36 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TRP VAL TYR TRP ASN ASP VAL VAL THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 16.03 12.88 14.55 15.37 11.88 10.60 7.21 6.07 3.82 </line>
<line>VAL CA 13.12 9.86 12.11 13.37 10.05 9.35 6.64 3.80 </line>
<line>VAL CA 10.09 6.85 8.65 9.65 6.40 5.65 3.82 </line>
<line>ASP CA 11.42 8.30 8.36 9.25 6.65 3.81 </line>
<line>ASN CA 8.67 6.32 5.40 5.57 3.80 </line>
<line>TRP CA 5.86 4.80 5.31 3.82 </line>
<line>TYR CA 4.99 5.47 3.80 </line>
<line>VAL CA 5.34 3.82 </line>
<line>TRP CA 3.82 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>THR CA 266</line>
<line>VAL CA 248</line>
<line>VAL CA 287</line>
<line>ASP CA 273</line>
<line>ASN CA 282</line>
<line>TRP CA 291</line>
<line>TYR CA 235</line>
<line>VAL CA 200</line>
<line>TRP CA 226</line>
<line>GLY CA 208</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2UWS</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2UWSL</entryIDChain>
<sequence>TIWFDQWVDWWQWW</sequence>
<secondary-structure> GGGGGHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3788 CA THR L 253 7.070 88.938 51.074 1.00 47.51 C </line>
<line>ATOM 3795 CA ILE L 254 9.400 87.075 53.363 1.00 46.45 C </line>
<line>ATOM 3803 CA TRP L 255 11.863 89.989 53.407 1.00 41.75 C </line>
<line>ATOM 3817 CA PHE L 256 10.736 93.616 53.004 1.00 41.62 C </line>
<line>ATOM 3828 CA ASP L 257 13.260 95.772 54.807 1.00 41.58 C </line>
<line>ATOM 3836 CA GLN L 258 16.634 96.954 53.521 1.00 39.45 C </line>
<line>ATOM 3845 CA TRP L 259 18.531 93.948 52.068 1.00 38.37 C </line>
<line>ATOM 3859 CA VAL L 260 21.881 95.245 53.492 1.00 38.80 C </line>
<line>ATOM 3866 CA ASP L 261 20.520 94.831 57.001 1.00 42.56 C </line>
<line>ATOM 3874 CA TRP L 262 19.802 91.061 56.484 1.00 44.34 C </line>
<line>ATOM 3888 CA TRP L 263 23.600 90.512 56.740 1.00 49.65 C </line>
<line>ATOM 3902 CA GLN L 264 23.605 91.569 60.340 1.00 55.70 C </line>
<line>ATOM 3911 CA TRP L 265 22.665 88.019 61.459 1.00 58.05 C </line>
<line>ATOM 3925 CA TRP L 266 26.288 86.953 60.827 1.00 57.78 C </line>
</atom-coordinate>
<distance-map>
<line> TRP TRP GLN TRP TRP ASP VAL TRP GLN ASP PHE TRP ILE THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 21.64 18.76 19.14 17.54 14.00 15.84 16.28 12.55 12.72 9.95 6.25 5.43 3.76 </line>
<line>ILE CA 18.46 15.57 16.45 15.00 11.57 14.04 14.92 11.50 12.25 9.62 6.69 3.82 </line>
<line>TRP CA 16.50 13.62 13.73 12.21 8.58 10.55 11.31 7.87 8.44 6.11 3.82 </line>
<line>PHE CA 18.64 15.66 14.95 13.75 10.04 10.64 11.27 7.86 6.80 3.78 </line>
<line>ASP CA 16.84 13.89 12.46 11.76 8.23 7.64 8.74 6.21 3.80 </line>
<line>GLN CA 15.70 13.39 11.14 10.02 7.32 5.63 5.52 3.84 </line>
<line>TRP CA 13.63 11.85 9.99 7.70 5.43 5.39 3.86 </line>
<line>VAL CA 11.92 10.78 7.96 5.99 5.55 3.79 </line>
<line>ASP CA 10.49 8.42 5.60 5.31 3.87 </line>
<line>TRP CA 8.82 6.50 5.44 3.85 </line>
<line>TRP CA 6.05 5.42 3.75 </line>
<line>GLN CA 5.36 3.84 </line>
<line>TRP CA 3.83 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>THR CA 273</line>
<line>ILE CA 238</line>
<line>TRP CA 299</line>
<line>PHE CA 279</line>
<line>ASP CA 259</line>
<line>GLN CA 277</line>
<line>TRP CA 314</line>
<line>VAL CA 282</line>
<line>ASP CA 256</line>
<line>TRP CA 284</line>
<line>TRP CA 267</line>
<line>GLN CA 239</line>
<line>TRP CA 210</line>
<line>TRP CA 202</line>
</n14>
</entryChain>
<parallel>
<x>25.600000381469727</x>
<y>18.711999893188477</y>
<z>-2.890000104904175</z>
</parallel>
<rotation>
<x>-0.11599999666213989</x>
<y>-0.32600000500679016</y>
<z>-0.9380000233650208</z>
<x>-0.21400000154972076</x>
<y>-0.9139999747276306</y>
<z>0.3440000116825104</z>
<x>-0.9700000286102295</x>
<y>0.2409999966621399</y>
<z>0.035999998450279236</z>
</rotation>
<rmsd>2.647623062133789</rmsd>
<dmax>4.307182788848877</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2UWS</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2UWSL</entryIDChain>
<sequence>RVPGG--TLVGG</sequence>
<secondary-structure> -- </secondary-structure>
<atom-coordinate>
<line>ATOM 1912 CA ARG L 10 8.262 66.638 7.268 1.00 36.03 C </line>
<line>ATOM 1923 CA VAL L 11 6.190 63.505 8.013 1.00 38.63 C </line>
<line>ATOM 1930 CA PRO L 12 2.744 63.538 9.718 1.00 42.81 C </line>
<line>ATOM 1937 CA GLY L 13 2.520 63.081 13.475 1.00 46.94 C </line>
<line>ATOM 1941 CA GLY L 14 3.459 64.296 16.905 1.00 48.96 C </line>
<line>ATOM 1945 CA THR L 15 0.636 66.718 17.489 1.00 49.83 C </line>
<line>ATOM 1952 CA LEU L 16 -0.764 67.069 21.048 1.00 50.88 C </line>
<line>ATOM 1960 CA VAL L 17 -4.285 68.161 20.160 1.00 52.97 C </line>
<line>ATOM 1967 CA GLY L 18 -6.162 68.103 16.851 1.00 55.49 C </line>
<line>ATOM 1971 CA GLY L 19 -4.697 65.041 15.176 1.00 56.58 C </line>
</atom-coordinate>
<distance-map>
<line> GLY GLY VAL LEU THR GLY GLY PRO VAL ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 15.27 17.38 18.05 16.48 12.75 11.02 9.17 6.79 3.83 </line>
<line>VAL CA 13.12 15.87 16.70 15.20 11.44 9.34 6.59 3.84 </line>
<line>PRO CA 9.35 12.29 13.41 12.38 8.66 7.26 3.79 </line>
<line>GLY CA 7.67 10.58 10.81 9.17 5.73 3.76 </line>
<line>GLY CA 8.37 10.35 9.25 6.53 3.77 </line>
<line>THR CA 6.05 6.97 5.78 3.84 </line>
<line>LEU CA 7.35 6.92 3.79 </line>
<line>VAL CA 5.89 3.80 </line>
<line>GLY CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>ARG CA 260</line>
<line>VAL CA 223</line>
<line>PRO CA 235</line>
<line>GLY CA 252</line>
<line>GLY CA 277</line>
<line>THR CA 300</line>
<line>LEU CA 257</line>
<line>VAL CA 232</line>
<line>GLY CA 194</line>
<line>GLY CA 186</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>M</pdbChain>
<entryIDChain>1AIJM</entryIDChain>
<sequence>RSGVGPFSTLLG</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 2450 CA ARG M 29 90.731 111.974 53.591 1.00 24.55 C </line>
<line>ATOM 2461 CA SER M 30 91.657 108.248 53.391 1.00 33.00 C </line>
<line>ATOM 2467 CA GLY M 31 94.131 106.645 50.996 1.00 41.96 C </line>
<line>ATOM 2471 CA VAL M 32 93.273 105.239 47.565 1.00 40.24 C </line>
<line>ATOM 2478 CA GLY M 33 91.556 101.861 47.502 1.00 29.31 C </line>
<line>ATOM 2482 CA PRO M 34 92.190 99.221 44.790 1.00 30.38 C </line>
<line>ATOM 2489 CA PHE M 35 91.507 99.775 41.107 1.00 27.69 C </line>
<line>ATOM 2500 CA SER M 36 88.927 97.370 39.619 1.00 32.72 C </line>
<line>ATOM 2506 CA THR M 37 89.323 96.280 36.001 1.00 27.54 C </line>
<line>ATOM 2513 CA LEU M 38 85.700 95.090 36.170 1.00 31.40 C </line>
<line>ATOM 2521 CA LEU M 39 84.289 98.543 36.968 1.00 21.58 C </line>
<line>ATOM 2529 CA GLY M 40 86.772 100.011 34.501 1.00 15.96 C </line>
</atom-coordinate>
<distance-map>
<line> GLY LEU LEU THR SER PHE PRO GLY VAL GLY SER ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 22.87 22.32 24.78 23.62 20.29 17.47 15.56 11.83 9.39 6.83 3.84 </line>
<line>SER CA 21.18 20.45 22.48 21.24 17.76 14.92 12.48 8.69 6.75 3.80 </line>
<line>GLY CA 19.24 18.96 20.60 18.85 15.57 12.32 9.87 6.46 3.81 </line>
<line>VAL CA 15.50 15.42 17.04 15.15 12.00 8.64 6.71 3.79 </line>
<line>GLY CA 13.98 13.22 14.44 12.98 9.45 6.73 3.84 </line>
<line>PRO CA 11.66 11.14 11.55 9.70 6.39 3.79 </line>
<line>PHE CA 8.13 8.41 8.95 6.56 3.83 </line>
<line>SER CA 6.15 5.47 5.24 3.80 </line>
<line>THR CA 4.76 5.60 3.82 </line>
<line>LEU CA 5.31 3.81 </line>
<line>LEU CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>ARG CA 228</line>
<line>SER CA 199</line>
<line>GLY CA 171</line>
<line>VAL CA 183</line>
<line>GLY CA 166</line>
<line>PRO CA 164</line>
<line>PHE CA 191</line>
<line>SER CA 174</line>
<line>THR CA 177</line>
<line>LEU CA 161</line>
<line>LEU CA 178</line>
<line>GLY CA 200</line>
</n14>
</entryChain>
<parallel>
<x>-88.31700134277344</x>
<y>-37.4630012512207</y>
<z>-31.344999313354492</z>
</parallel>
<rotation>
<x>-0.3109999895095825</x>
<y>-0.925000011920929</y>
<z>-0.2199999988079071</z>
<x>-0.13600000739097595</x>
<y>0.2720000147819519</y>
<z>-0.953000009059906</z>
<x>0.9409999847412109</x>
<y>-0.2669999897480011</y>
<z>-0.20999999344348907</z>
</rotation>
<rmsd>3.8029561042785645</rmsd>
<dmax>5.07391881942749</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2UWS</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2UWSL</entryIDChain>
<sequence>YGLGG-APLAK</sequence>
<secondary-structure>G - </secondary-structure>
<atom-coordinate>
<line>ATOM 2399 CA TYR L 73 -7.499 97.822 43.093 1.00 58.73 C </line>
<line>ATOM 2411 CA GLY L 74 -5.966 94.915 44.987 1.00 57.96 C </line>
<line>ATOM 2415 CA LEU L 75 -6.479 91.707 42.973 1.00 56.94 C </line>
<line>ATOM 2423 CA GLY L 76 -9.804 92.527 41.342 1.00 57.49 C </line>
<line>ATOM 2427 CA GLY L 77 -10.336 93.915 37.854 1.00 59.31 C </line>
<line>ATOM 2431 CA ALA L 78 -9.809 97.500 36.877 1.00 61.62 C </line>
<line>ATOM 2436 CA PRO L 79 -11.490 99.662 34.234 1.00 64.66 C </line>
<line>ATOM 2443 CA LEU L 80 -9.898 98.867 30.859 1.00 66.01 C </line>
<line>ATOM 2451 CA ALA L 81 -8.157 102.246 30.631 1.00 66.04 C </line>
<line>ATOM 2456 CA LYS L 82 -6.895 101.949 34.212 1.00 67.54 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ALA LEU PRO ALA GLY GLY LEU GLY TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 9.81 13.24 12.51 9.89 6.64 7.12 6.03 6.20 3.79 </line>
<line>GLY CA 12.90 16.27 15.19 12.99 9.34 8.42 5.81 3.82 </line>
<line>LEU CA 13.48 16.32 14.48 12.84 9.04 6.78 3.79 </line>
<line>GLY CA 12.17 14.56 12.25 10.21 6.68 3.79 </line>
<line>GLY CA 9.47 11.24 8.58 6.89 3.75 </line>
<line>ALA CA 5.95 8.02 6.17 3.81 </line>
<line>PRO CA 5.13 5.55 3.82 </line>
<line>LEU CA 5.46 3.81 </line>
<line>ALA CA 3.81 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>TYR CA 205</line>
<line>GLY CA 210</line>
<line>LEU CA 239</line>
<line>GLY CA 215</line>
<line>GLY CA 221</line>
<line>ALA CA 223</line>
<line>PRO CA 207</line>
<line>LEU CA 261</line>
<line>ALA CA 248</line>
<line>LYS CA 280</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>M</pdbChain>
<entryIDChain>1AIJM</entryIDChain>
<sequence>YGLSFAAPLKE</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 3029 CA TYR M 101 51.047 102.441 72.905 1.00 33.93 C </line>
<line>ATOM 3041 CA GLY M 102 50.257 105.572 70.864 1.00 36.56 C </line>
<line>ATOM 3045 CA LEU M 103 53.452 107.520 70.538 1.00 28.82 C </line>
<line>ATOM 3053 CA SER M 104 54.992 106.502 73.868 1.00 43.91 C </line>
<line>ATOM 3059 CA PHE M 105 58.391 104.896 74.309 1.00 47.84 C </line>
<line>ATOM 3070 CA ALA M 106 57.051 102.553 77.012 1.00 48.63 C </line>
<line>ATOM 3075 CA ALA M 107 56.719 99.636 74.606 1.00 48.48 C </line>
<line>ATOM 3080 CA PRO M 108 58.464 96.366 75.660 1.00 42.53 C </line>
<line>ATOM 3087 CA LEU M 109 61.773 95.769 73.801 1.00 37.22 C </line>
<line>ATOM 3095 CA LYS M 110 60.508 92.703 71.977 1.00 36.90 C </line>
<line>ATOM 3104 CA GLU M 111 57.141 94.414 71.210 1.00 43.22 C </line>
</atom-coordinate>
<distance-map>
<line> GLU LYS LEU PRO ALA ALA PHE SER LEU GLY TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 10.22 13.61 12.66 9.98 6.55 7.28 7.87 5.74 6.10 3.82 </line>
<line>GLY CA 13.12 16.49 15.41 13.23 9.54 9.65 8.86 5.68 3.76 </line>
<line>LEU CA 13.63 16.47 14.76 13.26 9.45 8.92 6.75 3.81 </line>
<line>SER CA 12.56 14.98 12.70 10.86 7.12 5.45 3.79 </line>
<line>PHE CA 11.00 12.59 9.75 8.64 5.53 3.82 </line>
<line>ALA CA 10.00 11.59 8.87 6.49 3.80 </line>
<line>ALA CA 6.24 8.33 6.41 3.85 </line>
<line>PRO CA 5.04 5.58 3.84 </line>
<line>LEU CA 5.48 3.79 </line>
<line>LYS CA 3.85 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>TYR CA 215</line>
<line>GLY CA 222</line>
<line>LEU CA 251</line>
<line>SER CA 230</line>
<line>PHE CA 241</line>
<line>ALA CA 183</line>
<line>ALA CA 227</line>
<line>PRO CA 211</line>
<line>LEU CA 256</line>
<line>LYS CA 269</line>
<line>GLU CA 281</line>
</n14>
</entryChain>
<parallel>
<x>-64.5469970703125</x>
<y>-6.4730000495910645</y>
<z>-34.29199981689453</z>
</parallel>
<rotation>
<x>-0.18799999356269836</x>
<y>-0.4449999928474426</y>
<z>-0.875</z>
<x>-0.10000000149011612</x>
<y>-0.878000020980835</y>
<z>0.46799999475479126</z>
<x>-0.9769999980926514</x>
<y>0.17499999701976776</y>
<z>0.12099999934434891</z>
</rotation>
<rmsd>0.6142339706420898</rmsd>
<dmax>1.3885140419006348</dmax>
</indel>