NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AIJS-2BOZL
confEVID 1AIJS-2BOZL
pdbIDA 1AIJ
pdbIDB 2BOZ
pdbChainA S
pdbChainB L
identity 0.270399987697601
indelSize 3
alignment <alignment>
<seq1>YQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADRG-----TAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDN------WYVWGQNH----------</seq1>
<seq2>---ALLSFE--------------RKYRVPGGTLV--GGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWN-------PQLISVYPPALEYGLGG-APLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLS------------AANPEKGKEMRTPDHEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGING</seq2>
<ss_1> GGG HHHHHHHHHHHHHHHHHHHHHHHH HHHHHH HHHH HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHIIIIHHHHH GGG HHHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHH -----HHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH ------HHHHH ----------</ss_1>
<ss_2>--- --------------GGG -- EEE EEEHHHHHHHHHHHHHHHHHHHHHHHH ------- EEE GGG - HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHIIIIHHHHH GGG EE HHHHHHHHHHGGG GGG HHHHHHHHHHHHHHHHHHHHHHHHHH------------HH HHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHH GGGGGHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>S</pdbChain>
<entryIDChain>1AIJS</entryIDChain>
<sequence>IADRG-----TAAER</sequence>
<secondary-structure>HH -----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 10625 CA ILE S 238 38.403 20.999 19.695 1.00 32.06 C </line>
<line>ATOM 10633 CA ALA S 239 41.334 19.811 17.597 1.00 35.00 C </line>
<line>ATOM 10638 CA ASP S 240 42.095 16.710 19.726 1.00 35.59 C </line>
<line>ATOM 10646 CA ARG S 241 39.471 15.777 22.295 1.00 33.38 C </line>
<line>ATOM 10657 CA GLY S 242 40.779 14.990 25.771 1.00 22.88 C </line>
<line>ATOM 10661 CA THR S 243 39.206 13.482 28.882 1.00 28.49 C </line>
<line>ATOM 10668 CA ALA S 244 38.371 17.097 29.957 1.00 28.79 C </line>
<line>ATOM 10673 CA ALA S 245 36.021 17.472 26.987 1.00 28.75 C </line>
<line>ATOM 10678 CA GLU S 246 34.662 13.934 27.543 1.00 27.20 C </line>
<line>ATOM 10687 CA ARG S 247 33.873 14.422 31.220 1.00 24.98 C </line>
</atom-coordinate>
<distance-map>
<line> ARG GLU ALA ALA THR GLY ARG ASP ALA ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 14.02 11.20 8.44 10.98 11.90 8.87 5.93 5.66 3.80 </line>
<line>ALA CA 16.44 13.34 11.04 13.00 13.11 9.51 6.47 3.84 </line>
<line>ASP CA 14.32 11.14 9.50 10.89 10.13 6.42 3.79 </line>
<line>ARG CA 10.62 7.35 6.07 7.85 6.98 3.80 </line>
<line>GLY CA 8.82 6.46 5.50 5.27 3.80 </line>
<line>THR CA 5.90 4.76 5.45 3.86 </line>
<line>ALA CA 5.38 5.44 3.81 </line>
<line>ALA CA 5.64 3.83 </line>
<line>GLU CA 3.79 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>ILE CA 218</line>
<line>ALA CA 154</line>
<line>ASP CA 157</line>
<line>ARG CA 222</line>
<line>GLY CA 219</line>
<line>THR CA 240</line>
<line>ALA CA 306</line>
<line>ALA CA 336</line>
<line>GLU CA 296</line>
<line>ARG CA 281</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2BOZ</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2BOZL</entryIDChain>
<sequence>AANPEKGKEMRTPDH</sequence>
<secondary-structure>HH H</secondary-structure>
<atom-coordinate>
<line>ATOM 3370 CA ALA L 197 43.291 70.204 75.526 1.00 31.06 C </line>
<line>ATOM 3375 CA ALA L 198 44.624 68.576 78.759 1.00 31.40 C </line>
<line>ATOM 3380 CA ASN L 199 46.109 71.908 79.837 1.00 32.20 C </line>
<line>ATOM 3388 CA PRO L 200 43.455 74.559 79.020 1.00 33.16 C </line>
<line>ATOM 3395 CA GLU L 201 43.553 78.204 80.142 1.00 35.79 C </line>
<line>ATOM 3404 CA LYS L 202 44.129 78.663 83.864 1.00 40.47 C </line>
<line>ATOM 3413 CA GLY L 203 41.180 77.431 85.906 1.00 35.92 C </line>
<line>ATOM 3417 CA LYS L 204 39.223 76.002 82.972 1.00 34.48 C </line>
<line>ATOM 3426 CA GLU L 205 38.047 72.431 82.738 1.00 34.90 C </line>
<line>ATOM 3435 CA MET L 206 39.969 69.948 80.592 1.00 34.83 C </line>
<line>ATOM 3443 CA ARG L 207 38.875 70.066 76.933 1.00 35.61 C </line>
<line>ATOM 3454 CA THR L 208 37.477 67.030 75.113 1.00 34.75 C </line>
<line>ATOM 3461 CA PRO L 209 38.507 65.360 71.856 1.00 34.49 C </line>
<line>ATOM 3468 CA ASP L 210 35.511 67.290 70.401 1.00 33.55 C </line>
<line>ATOM 3476 CA HIS L 211 37.446 70.574 71.134 1.00 34.02 C </line>
</atom-coordinate>
<distance-map>
<line> HIS ASP PRO THR ARG MET GLU LYS GLY LYS GLU PRO ASN ALA ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 7.32 9.76 7.73 6.64 4.64 6.06 9.19 10.28 12.82 11.91 9.24 5.59 5.42 3.86 </line>
<line>ALA CA 10.66 12.43 9.77 8.17 6.21 5.19 8.60 10.10 11.89 11.32 9.79 6.10 3.80 </line>
<line>ASN CA 12.35 14.92 12.82 10.98 8.01 6.49 8.58 8.60 9.57 8.11 6.80 3.84 </line>
<line>PRO CA 10.69 13.79 12.67 10.38 6.75 5.99 6.90 5.97 7.80 6.38 3.82 </line>
<line>GLU CA 13.29 16.69 16.10 13.68 9.92 9.01 8.39 5.62 6.28 3.79 </line>
<line>LYS CA 16.50 19.62 18.78 16.00 12.23 10.20 8.78 5.65 3.79 </line>
<line>GLY CA 16.71 19.37 18.72 15.44 11.84 9.26 6.70 3.81 </line>
<line>LYS CA 13.14 15.74 15.41 12.05 8.48 6.55 3.77 </line>
<line>GLU CA 11.77 13.60 12.99 9.36 6.32 3.80 </line>
<line>MET CA 9.81 11.44 9.98 6.69 3.82 </line>
<line>ARG CA 5.99 7.85 6.93 3.81 </line>
<line>THR CA 5.33 5.11 3.80 </line>
<line>PRO CA 5.37 3.85 </line>
<line>ASP CA 3.88 </line>
<line>HIS CA </line>
</distance-map>
<n14>
<line>ALA CA 235</line>
<line>ALA CA 186</line>
<line>ASN CA 166</line>
<line>PRO CA 170</line>
<line>GLU CA 126</line>
<line>LYS CA 94</line>
<line>GLY CA 89</line>
<line>LYS CA 110</line>
<line>GLU CA 131</line>
<line>MET CA 161</line>
<line>ARG CA 196</line>
<line>THR CA 198</line>
<line>PRO CA 242</line>
<line>ASP CA 204</line>
<line>HIS CA 244</line>
</n14>
</entryChain>
<parallel>
<x>-2.5260000228881836</x>
<y>-53.69599914550781</y>
<z>-53.284000396728516</z>
</parallel>
<rotation>
<x>-0.03200000151991844</x>
<y>0.2630000114440918</y>
<z>-0.9639999866485596</z>
<x>0.12700000405311584</x>
<y>-0.9559999704360962</y>
<z>-0.26499998569488525</z>
<x>0.9909999966621399</x>
<y>0.13099999725818634</y>
<z>0.003000000026077032</z>
</rotation>
<rmsd>4.211819171905518</rmsd>
<dmax>7.337244987487793</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2BOZ</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2BOZL</entryIDChain>
<sequence>GGTLV--GGNLF</sequence>
<secondary-structure> -- </secondary-structure>
<atom-coordinate>
<line>ATOM 1937 CA GLY L 13 53.228 33.059 79.170 1.00 31.93 C </line>
<line>ATOM 1941 CA GLY L 14 53.790 34.594 75.731 1.00 34.90 C </line>
<line>ATOM 1945 CA THR L 15 57.356 33.392 75.098 1.00 37.92 C </line>
<line>ATOM 1952 CA LEU L 16 58.156 32.223 71.567 1.00 40.63 C </line>
<line>ATOM 1960 CA VAL L 17 61.034 29.947 72.517 1.00 41.30 C </line>
<line>ATOM 1967 CA GLY L 18 61.983 28.020 75.666 1.00 40.32 C </line>
<line>ATOM 1971 CA GLY L 19 58.650 27.965 77.456 1.00 38.57 C </line>
<line>ATOM 1975 CA ASN L 20 59.086 29.155 81.015 1.00 38.24 C </line>
<line>ATOM 1983 CA LEU L 21 62.928 28.928 81.005 1.00 38.00 C </line>
<line>ATOM 1991 CA PHE L 22 63.636 32.641 80.487 1.00 36.29 C </line>
</atom-coordinate>
<distance-map>
<line> PHE LEU ASN GLY GLY VAL LEU THR GLY GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 10.50 10.70 7.28 7.63 10.69 10.72 9.10 5.81 3.81 </line>
<line>GLY CA 11.11 11.98 9.25 8.40 10.50 9.19 6.48 3.82 </line>
<line>THR CA 8.31 9.27 7.48 6.06 7.11 5.66 3.80 </line>
<line>LEU CA 10.48 11.08 9.98 7.28 7.01 3.79 </line>
<line>VAL CA 8.81 8.76 8.75 5.83 3.81 </line>
<line>GLY CA 6.88 5.50 6.19 3.78 </line>
<line>GLY CA 7.48 5.64 3.78 </line>
<line>ASN CA 5.76 3.85 </line>
<line>LEU CA 3.82 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>GLY CA 248</line>
<line>GLY CA 280</line>
<line>THR CA 298</line>
<line>LEU CA 253</line>
<line>VAL CA 234</line>
<line>GLY CA 189</line>
<line>GLY CA 189</line>
<line>ASN CA 201</line>
<line>LEU CA 183</line>
<line>PHE CA 265</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>S</pdbChain>
<entryIDChain>1AIJS</entryIDChain>
<sequence>VGPFSTLLGWFG</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 8965 CA VAL S 32 53.538 46.908 26.805 1.00 45.10 C </line>
<line>ATOM 8972 CA GLY S 33 51.838 48.531 29.742 1.00 46.12 C </line>
<line>ATOM 8976 CA PRO S 34 52.066 47.480 33.436 1.00 45.81 C </line>
<line>ATOM 8983 CA PHE S 35 51.716 43.965 34.833 1.00 39.51 C </line>
<line>ATOM 8994 CA SER S 36 49.279 44.038 37.789 1.00 38.57 C </line>
<line>ATOM 9000 CA THR S 37 49.535 41.308 40.427 1.00 35.74 C </line>
<line>ATOM 9007 CA LEU S 38 45.932 42.232 41.316 1.00 33.45 C </line>
<line>ATOM 9015 CA LEU S 39 44.438 41.158 37.958 1.00 27.36 C </line>
<line>ATOM 9023 CA GLY S 40 46.964 38.300 37.967 1.00 25.73 C </line>
<line>ATOM 9027 CA TRP S 41 45.177 36.485 40.837 1.00 21.23 C </line>
<line>ATOM 9041 CA PHE S 42 42.072 35.975 38.686 1.00 23.80 C </line>
<line>ATOM 9052 CA GLY S 43 43.342 36.259 35.121 1.00 24.87 C </line>
</atom-coordinate>
<distance-map>
<line> GLY PHE TRP GLY LEU LEU THR SER PHE PRO GLY VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 16.93 19.80 19.38 15.55 15.50 17.04 15.26 12.13 8.74 6.82 3.76 </line>
<line>GLY CA 15.87 18.25 17.68 14.00 13.29 14.44 13.10 9.57 6.84 3.85 </line>
<line>PRO CA 14.31 16.12 14.94 11.44 10.89 11.28 9.66 6.21 3.80 </line>
<line>PHE CA 11.38 13.10 11.61 8.03 8.40 8.86 6.57 3.83 </line>
<line>SER CA 10.14 10.85 9.12 6.19 5.64 5.19 3.80 </line>
<line>THR CA 9.59 9.34 6.51 4.66 5.67 3.82 </line>
<line>LEU CA 8.99 7.81 5.82 5.27 3.83 </line>
<line>LEU CA 5.77 5.74 5.54 3.81 </line>
<line>GLY CA 5.04 5.46 3.84 </line>
<line>TRP CA 6.01 3.81 </line>
<line>PHE CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>VAL CA 183</line>
<line>GLY CA 165</line>
<line>PRO CA 165</line>
<line>PHE CA 191</line>
<line>SER CA 174</line>
<line>THR CA 177</line>
<line>LEU CA 162</line>
<line>LEU CA 176</line>
<line>GLY CA 201</line>
<line>TRP CA 189</line>
<line>PHE CA 197</line>
<line>GLY CA 219</line>
</n14>
</entryChain>
<parallel>
<x>8.532999992370605</x>
<y>-12.314000129699707</y>
<z>41.106998443603516</z>
</parallel>
<rotation>
<x>-0.746999979019165</x>
<y>-0.2460000067949295</y>
<z>-0.6179999709129333</z>
<x>0.14499999582767487</x>
<y>0.847000002861023</y>
<z>-0.5120000243186951</z>
<x>0.6489999890327454</x>
<y>-0.47200000286102295</y>
<z>-0.597000002861023</z>
</rotation>
<rmsd>4.271858215332031</rmsd>
<dmax>7.825867176055908</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2BOZ</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2BOZL</entryIDChain>
<sequence>YGLGG-APLAK</sequence>
<secondary-structure>G - </secondary-structure>
<atom-coordinate>
<line>ATOM 2399 CA TYR L 73 87.961 42.177 49.110 1.00 40.31 C </line>
<line>ATOM 2411 CA GLY L 74 84.722 42.289 47.134 1.00 36.65 C </line>
<line>ATOM 2415 CA LEU L 75 82.239 40.171 49.044 1.00 35.45 C </line>
<line>ATOM 2423 CA GLY L 76 84.746 37.660 50.506 1.00 35.30 C </line>
<line>ATOM 2427 CA GLY L 77 85.835 37.578 54.182 1.00 37.82 C </line>
<line>ATOM 2431 CA ALA L 78 88.732 39.908 55.159 1.00 37.67 C </line>
<line>ATOM 2436 CA PRO L 79 91.426 39.596 57.890 1.00 35.85 C </line>
<line>ATOM 2443 CA LEU L 80 90.086 40.670 61.274 1.00 36.28 C </line>
<line>ATOM 2451 CA ALA L 81 92.074 43.862 61.362 1.00 37.94 C </line>
<line>ATOM 2456 CA LYS L 82 91.287 44.732 57.726 1.00 38.95 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ALA LEU PRO ALA GLY GLY LEU GLY TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 9.58 13.03 12.44 9.79 6.51 7.17 5.72 6.06 3.80 </line>
<line>GLY CA 12.70 16.09 15.21 12.96 9.28 8.55 5.73 3.78 </line>
<line>LEU CA 13.34 16.19 14.54 12.77 8.92 6.79 3.84 </line>
<line>GLY CA 12.04 14.49 12.39 10.14 6.53 3.83 </line>
<line>GLY CA 9.67 11.40 8.83 7.01 3.84 </line>
<line>ALA CA 6.03 8.08 6.31 3.85 </line>
<line>PRO CA 5.14 5.54 3.79 </line>
<line>LEU CA 5.53 3.76 </line>
<line>ALA CA 3.82 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>TYR CA 206</line>
<line>GLY CA 212</line>
<line>LEU CA 236</line>
<line>GLY CA 215</line>
<line>GLY CA 222</line>
<line>ALA CA 218</line>
<line>PRO CA 210</line>
<line>LEU CA 263</line>
<line>ALA CA 254</line>
<line>LYS CA 277</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>S</pdbChain>
<entryIDChain>1AIJS</entryIDChain>
<sequence>YGLSFAAPLKE</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 9523 CA TYR S 101 11.254 69.803 15.128 1.00 34.69 C </line>
<line>ATOM 9535 CA GLY S 102 10.501 66.355 13.636 1.00 31.68 C </line>
<line>ATOM 9539 CA LEU S 103 13.706 64.968 12.165 1.00 33.25 C </line>
<line>ATOM 9547 CA SER S 104 15.214 68.316 11.155 1.00 40.47 C </line>
<line>ATOM 9553 CA PHE S 105 18.630 69.391 12.324 1.00 39.96 C </line>
<line>ATOM 9564 CA ALA S 106 17.456 72.983 12.814 1.00 40.96 C </line>
<line>ATOM 9569 CA ALA S 107 17.029 72.666 16.586 1.00 40.98 C </line>
<line>ATOM 9574 CA PRO S 108 18.796 75.432 18.662 1.00 37.75 C </line>
<line>ATOM 9581 CA LEU S 109 21.775 74.097 20.637 1.00 34.99 C </line>
<line>ATOM 9589 CA LYS S 110 20.009 74.404 23.993 1.00 31.41 C </line>
<line>ATOM 9598 CA GLU S 111 16.856 72.755 22.566 1.00 36.70 C </line>
</atom-coordinate>
<distance-map>
<line> GLU LYS LEU PRO ALA ALA PHE SER LEU GLY TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 9.77 13.28 12.63 10.05 6.61 7.34 7.90 5.80 6.18 3.83 </line>
<line>GLY CA 12.69 16.20 15.36 13.28 9.55 9.64 8.78 5.68 3.79 </line>
<line>LEU CA 13.37 16.39 14.84 13.33 9.48 8.87 6.62 3.81 </line>
<line>SER CA 12.35 15.00 12.90 10.95 7.19 5.44 3.77 </line>
<line>PHE CA 10.93 12.77 10.06 8.76 5.61 3.81 </line>
<line>ALA CA 9.77 11.55 9.01 6.48 3.81 </line>
<line>ALA CA 5.98 8.17 6.40 3.88 </line>
<line>PRO CA 5.12 5.56 3.82 </line>
<line>LEU CA 5.45 3.80 </line>
<line>LYS CA 3.83 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>TYR CA 214</line>
<line>GLY CA 227</line>
<line>LEU CA 254</line>
<line>SER CA 234</line>
<line>PHE CA 241</line>
<line>ALA CA 187</line>
<line>ALA CA 228</line>
<line>PRO CA 209</line>
<line>LEU CA 262</line>
<line>LYS CA 265</line>
<line>GLU CA 281</line>
</n14>
</entryChain>
<parallel>
<x>71.1050033569336</x>
<y>-30.121999740600586</y>
<z>38.000999450683594</z>
</parallel>
<rotation>
<x>-0.2939999997615814</x>
<y>-0.4320000112056732</y>
<z>0.8519999980926514</z>
<x>0.9300000071525574</x>
<y>-0.33399999141693115</y>
<z>0.15199999511241913</z>
<x>0.21899999678134918</x>
<y>0.8379999995231628</y>
<z>0.5</z>
</rotation>
<rmsd>0.565608024597168</rmsd>
<dmax>1.272359013557434</dmax>
</indel>