NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AIJS-2UX4L
confEVID 1AIJS-2UX4L
pdbIDA 1AIJ
pdbIDB 2UX4
pdbChainA S
pdbChainB L
identity 0.271200001239777
indelSize 3
alignment <alignment>
<seq1>YQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYGLSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADRG-----TAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDN-----WYVWGQNH-----------</seq1>
<seq2>---ALLSFE---------RKYRVPGGTL-------VGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQGTWN-------PQLISVYPPALEYGLGG-APLAKGGLWQIITICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALHGALVLS------------AANPEKGKEMRTPDHEDTFFRDLVGYSIGTLGIHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWWANIPGGING</seq2>
<ss_1> GGG HHHHHHHHHHHHHHHHHHHHHHHH HHHHHH HHHH HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHIIIIHHHHH GGG HHHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHH -----HHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH -----HHHHH -----------</ss_1>
<ss_2>--- --------- ------- EEE HHHHHHHHHHHHHHHHHHHHHHH ------- EEE GGG - HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHIIIIHHHHH GGG EE HHHHHHHHHHGGG GGG HHHHHHHHHHHHHHHHHHHHHHHHHH------------HH HHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHH GGGGGHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>S</pdbChain>
<entryIDChain>1AIJS</entryIDChain>
<sequence>IADRG-----TAAER</sequence>
<secondary-structure>HH -----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 10625 CA ILE S 238 38.403 20.999 19.695 1.00 32.06 C </line>
<line>ATOM 10633 CA ALA S 239 41.334 19.811 17.597 1.00 35.00 C </line>
<line>ATOM 10638 CA ASP S 240 42.095 16.710 19.726 1.00 35.59 C </line>
<line>ATOM 10646 CA ARG S 241 39.471 15.777 22.295 1.00 33.38 C </line>
<line>ATOM 10657 CA GLY S 242 40.779 14.990 25.771 1.00 22.88 C </line>
<line>ATOM 10661 CA THR S 243 39.206 13.482 28.882 1.00 28.49 C </line>
<line>ATOM 10668 CA ALA S 244 38.371 17.097 29.957 1.00 28.79 C </line>
<line>ATOM 10673 CA ALA S 245 36.021 17.472 26.987 1.00 28.75 C </line>
<line>ATOM 10678 CA GLU S 246 34.662 13.934 27.543 1.00 27.20 C </line>
<line>ATOM 10687 CA ARG S 247 33.873 14.422 31.220 1.00 24.98 C </line>
</atom-coordinate>
<distance-map>
<line> ARG GLU ALA ALA THR GLY ARG ASP ALA ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 14.02 11.20 8.44 10.98 11.90 8.87 5.93 5.66 3.80 </line>
<line>ALA CA 16.44 13.34 11.04 13.00 13.11 9.51 6.47 3.84 </line>
<line>ASP CA 14.32 11.14 9.50 10.89 10.13 6.42 3.79 </line>
<line>ARG CA 10.62 7.35 6.07 7.85 6.98 3.80 </line>
<line>GLY CA 8.82 6.46 5.50 5.27 3.80 </line>
<line>THR CA 5.90 4.76 5.45 3.86 </line>
<line>ALA CA 5.38 5.44 3.81 </line>
<line>ALA CA 5.64 3.83 </line>
<line>GLU CA 3.79 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>ILE CA 218</line>
<line>ALA CA 154</line>
<line>ASP CA 157</line>
<line>ARG CA 222</line>
<line>GLY CA 219</line>
<line>THR CA 240</line>
<line>ALA CA 306</line>
<line>ALA CA 336</line>
<line>GLU CA 296</line>
<line>ARG CA 281</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2UX4</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2UX4L</entryIDChain>
<sequence>AANPEKGKEMRTPDH</sequence>
<secondary-structure>HH H</secondary-structure>
<atom-coordinate>
<line>ATOM 3386 CA ALA L 197 39.521 73.528 17.080 1.00 37.78 C </line>
<line>ATOM 3391 CA ALA L 198 37.408 73.832 13.886 1.00 39.77 C </line>
<line>ATOM 3396 CA ASN L 199 39.458 76.795 12.689 1.00 40.84 C </line>
<line>ATOM 3404 CA PRO L 200 43.068 76.048 13.649 1.00 42.47 C </line>
<line>ATOM 3411 CA GLU L 201 46.266 77.818 12.571 1.00 46.52 C </line>
<line>ATOM 3420 CA LYS L 202 46.587 78.487 8.789 1.00 49.44 C </line>
<line>ATOM 3429 CA GLY L 203 47.143 75.284 6.810 1.00 48.18 C </line>
<line>ATOM 3433 CA LYS L 204 46.668 72.882 9.748 1.00 47.05 C </line>
<line>ATOM 3442 CA GLU L 205 44.119 70.085 10.013 1.00 45.95 C </line>
<line>ATOM 3451 CA MET L 206 40.942 70.454 12.092 1.00 44.31 C </line>
<line>ATOM 3459 CA ARG L 207 41.748 69.692 15.732 1.00 43.17 C </line>
<line>ATOM 3470 CA THR L 208 39.810 67.023 17.662 1.00 42.13 C </line>
<line>ATOM 3477 CA PRO L 209 37.800 67.065 20.915 1.00 40.70 C </line>
<line>ATOM 3484 CA ASP L 210 40.996 65.490 22.379 1.00 40.10 C </line>
<line>ATOM 3492 CA HIS L 211 42.760 68.769 21.525 1.00 39.65 C </line>
</atom-coordinate>
<distance-map>
<line> HIS ASP PRO THR ARG MET GLU LYS GLY LYS GLU PRO ASN ALA ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 7.27 9.74 7.71 6.54 4.64 6.03 9.11 10.26 12.91 11.97 9.18 5.54 5.47 3.84 </line>
<line>ALA CA 10.61 12.43 9.76 8.15 6.28 5.21 8.61 10.19 12.12 11.48 9.80 6.08 3.80 </line>
<line>ASN CA 12.39 14.97 12.85 10.97 8.06 6.54 8.60 8.71 9.79 8.30 6.89 3.81 </line>
<line>PRO CA 10.73 13.86 12.70 10.40 6.82 6.18 7.06 6.18 8.00 6.48 3.81 </line>
<line>GLU CA 13.20 16.61 16.03 13.57 9.82 9.10 8.42 5.70 6.35 3.85 </line>
<line>LYS CA 16.47 19.62 18.83 16.00 12.21 10.36 8.84 5.69 3.81 </line>
<line>GLY CA 16.68 19.39 18.81 15.48 11.83 9.47 6.81 3.82 </line>
<line>LYS CA 13.07 15.70 15.40 12.00 8.38 6.65 3.79 </line>
<line>GLU CA 11.67 13.56 12.96 9.30 6.20 3.81 </line>
<line>MET CA 9.75 11.42 9.96 6.64 3.81 </line>
<line>ARG CA 5.95 7.90 7.03 3.82 </line>
<line>THR CA 5.16 5.10 3.82 </line>
<line>PRO CA 5.28 3.85 </line>
<line>ASP CA 3.82 </line>
<line>HIS CA </line>
</distance-map>
<n14>
<line>ALA CA 235</line>
<line>ALA CA 187</line>
<line>ASN CA 166</line>
<line>PRO CA 169</line>
<line>GLU CA 130</line>
<line>LYS CA 93</line>
<line>GLY CA 89</line>
<line>LYS CA 109</line>
<line>GLU CA 132</line>
<line>MET CA 160</line>
<line>ARG CA 192</line>
<line>THR CA 200</line>
<line>PRO CA 241</line>
<line>ASP CA 205</line>
<line>HIS CA 244</line>
</n14>
</entryChain>
<parallel>
<x>-1.1749999523162842</x>
<y>-55.68299865722656</y>
<z>8.340999603271484</z>
</parallel>
<rotation>
<x>0.13600000739097595</x>
<y>-0.949999988079071</y>
<z>0.28299999237060547</z>
<x>0.019999999552965164</x>
<y>-0.28299999237060547</y>
<z>-0.9589999914169312</z>
<x>-0.9900000095367432</x>
<y>-0.13600000739097595</y>
<z>0.019999999552965164</z>
</rotation>
<rmsd>4.194549083709717</rmsd>
<dmax>7.247560977935791</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>S</pdbChain>
<entryIDChain>1AIJS</entryIDChain>
<sequence>TVVDN-----WYVWG</sequence>
<secondary-structure> -----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 11018 CA THR S 289 5.254 52.143 14.594 1.00 38.70 C </line>
<line>ATOM 11025 CA VAL S 290 3.077 49.026 14.406 1.00 34.03 C </line>
<line>ATOM 11032 CA VAL S 291 1.808 48.413 17.953 1.00 30.23 C </line>
<line>ATOM 11039 CA ASP S 292 0.814 51.252 20.251 1.00 33.89 C </line>
<line>ATOM 11047 CA ASN S 293 -0.327 48.975 23.059 1.00 30.55 C </line>
<line>ATOM 11055 CA TRP S 294 0.906 45.489 23.666 1.00 30.58 C </line>
<line>ATOM 11069 CA TYR S 295 -1.891 44.506 26.143 1.00 27.11 C </line>
<line>ATOM 11081 CA VAL S 296 -4.435 45.313 23.412 1.00 26.45 C </line>
<line>ATOM 11088 CA TRP S 297 -2.416 43.505 20.722 1.00 34.18 C </line>
<line>ATOM 11102 CA GLY S 298 -2.213 40.553 23.111 1.00 29.50 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TRP VAL TYR TRP ASN ASP VAL VAL THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 16.21 13.08 14.77 15.58 12.06 10.62 7.25 6.09 3.81 </line>
<line>VAL CA 13.25 10.03 12.30 13.52 10.15 9.30 6.65 3.82 </line>
<line>VAL CA 10.23 7.04 8.85 9.80 6.48 5.56 3.79 </line>
<line>ASP CA 11.48 8.41 8.53 9.36 6.70 3.79 </line>
<line>ASN CA 8.63 6.30 5.51 5.65 3.75 </line>
<line>TRP CA 5.87 4.86 5.35 3.86 </line>
<line>TYR CA 4.99 5.54 3.82 </line>
<line>VAL CA 5.26 3.82 </line>
<line>TRP CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>THR CA 264</line>
<line>VAL CA 243</line>
<line>VAL CA 289</line>
<line>ASP CA 274</line>
<line>ASN CA 281</line>
<line>TRP CA 294</line>
<line>TYR CA 233</line>
<line>VAL CA 196</line>
<line>TRP CA 221</line>
<line>GLY CA 205</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2UX4</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2UX4L</entryIDChain>
<sequence>TIWFDQWVDWWQWWV</sequence>
<secondary-structure> GGGGGHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3814 CA THR L 253 6.857 88.994 51.380 1.00 40.32 C </line>
<line>ATOM 3821 CA ILE L 254 9.188 87.264 53.852 1.00 41.21 C </line>
<line>ATOM 3829 CA TRP L 255 11.771 90.070 53.743 1.00 39.08 C </line>
<line>ATOM 3843 CA PHE L 256 10.666 93.680 53.209 1.00 37.96 C </line>
<line>ATOM 3854 CA ASP L 257 13.276 95.799 54.991 1.00 37.08 C </line>
<line>ATOM 3862 CA GLN L 258 16.647 97.079 53.784 1.00 37.06 C </line>
<line>ATOM 3871 CA TRP L 259 18.532 94.037 52.464 1.00 36.97 C </line>
<line>ATOM 3885 CA VAL L 260 21.854 95.318 53.845 1.00 38.13 C </line>
<line>ATOM 3892 CA ASP L 261 20.547 94.780 57.430 1.00 40.00 C </line>
<line>ATOM 3900 CA TRP L 262 19.801 91.093 56.740 1.00 40.66 C </line>
<line>ATOM 3914 CA TRP L 263 23.561 90.512 57.034 1.00 44.31 C </line>
<line>ATOM 3928 CA GLN L 264 23.555 91.600 60.683 1.00 47.99 C </line>
<line>ATOM 3937 CA TRP L 265 22.613 88.093 61.857 1.00 48.94 C </line>
<line>ATOM 3951 CA TRP L 266 26.196 86.965 61.094 1.00 48.55 C </line>
<line>ATOM 3965 CA VAL L 267 27.890 89.891 62.861 1.00 52.01 C </line>
</atom-coordinate>
<distance-map>
<line> VAL TRP TRP GLN TRP TRP ASP VAL TRP GLN ASP PHE TRP ILE THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 23.98 21.74 18.94 19.29 17.70 14.17 16.05 16.46 12.76 12.92 10.03 6.31 5.56 3.81 </line>
<line>ILE CA 20.92 18.49 15.65 16.49 15.08 11.65 14.08 15.01 11.62 12.33 9.53 6.62 3.82 </line>
<line>TRP CA 18.52 16.49 13.69 13.76 12.25 8.63 10.62 11.37 7.94 8.54 6.05 3.81 </line>
<line>PHE CA 20.10 18.67 15.77 15.04 13.82 10.13 10.80 11.33 7.91 6.90 3.80 </line>
<line>ASP CA 17.62 16.80 13.92 12.48 11.74 8.23 7.74 8.67 6.09 3.80 </line>
<line>GLN CA 16.14 15.71 13.47 11.20 10.07 7.38 5.81 5.50 3.81 </line>
<line>TRP CA 14.59 13.54 11.84 9.94 7.66 5.34 5.41 3.82 </line>
<line>VAL CA 12.13 11.88 10.82 7.97 6.02 5.52 3.85 </line>
<line>ASP CA 10.36 10.32 8.28 5.45 5.24 3.82 </line>
<line>TRP CA 10.21 8.77 6.56 5.47 3.82 </line>
<line>TRP CA 7.29 6.00 5.48 3.81 </line>
<line>GLN CA 5.14 5.35 3.82 </line>
<line>TRP CA 5.66 3.83 </line>
<line>TRP CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>THR CA 263</line>
<line>ILE CA 232</line>
<line>TRP CA 298</line>
<line>PHE CA 278</line>
<line>ASP CA 262</line>
<line>GLN CA 275</line>
<line>TRP CA 313</line>
<line>VAL CA 282</line>
<line>ASP CA 253</line>
<line>TRP CA 282</line>
<line>TRP CA 263</line>
<line>GLN CA 235</line>
<line>TRP CA 209</line>
<line>TRP CA 201</line>
<line>VAL CA 208</line>
</n14>
</entryChain>
<parallel>
<x>-14.53499984741211</x>
<y>-42.61199951171875</y>
<z>-35.40800094604492</z>
</parallel>
<rotation>
<x>0.0010000000474974513</x>
<y>-0.656000018119812</y>
<z>0.7549999952316284</z>
<x>-0.013000000268220901</x>
<y>0.7549999952316284</y>
<z>0.656000018119812</z>
<x>-1.0</x>
<y>-0.009999999776482582</y>
<z>-0.00800000037997961</z>
</rotation>
<rmsd>3.2924869060516357</rmsd>
<dmax>4.648381233215332</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2UX4</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>2UX4L</entryIDChain>
<sequence>YGLGG-APLAK</sequence>
<secondary-structure>G - </secondary-structure>
<atom-coordinate>
<line>ATOM 2415 CA TYR L 73 -7.611 97.952 43.424 1.00 52.36 C </line>
<line>ATOM 2427 CA GLY L 74 -5.852 95.094 45.205 1.00 52.15 C </line>
<line>ATOM 2431 CA LEU L 75 -6.359 91.796 43.386 1.00 52.46 C </line>
<line>ATOM 2439 CA GLY L 76 -9.624 92.574 41.583 1.00 53.58 C </line>
<line>ATOM 2443 CA GLY L 77 -10.547 93.985 38.184 1.00 54.43 C </line>
<line>ATOM 2447 CA ALA L 78 -9.830 97.554 37.170 1.00 55.32 C </line>
<line>ATOM 2452 CA PRO L 79 -11.439 99.757 34.498 1.00 55.90 C </line>
<line>ATOM 2459 CA LEU L 80 -9.818 99.090 31.109 1.00 55.00 C </line>
<line>ATOM 2467 CA ALA L 81 -8.118 102.503 31.012 1.00 53.82 C </line>
<line>ATOM 2472 CA LYS L 82 -6.903 102.180 34.626 1.00 53.44 C </line>
</atom-coordinate>
<distance-map>
<line> LYS ALA LEU PRO ALA GLY GLY LEU GLY TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 9.79 13.23 12.56 9.88 6.65 7.20 6.03 6.28 3.80 </line>
<line>GLY CA 12.78 16.17 15.18 12.95 9.30 8.52 5.80 3.80 </line>
<line>LEU CA 13.60 16.46 14.69 12.97 9.16 7.03 3.81 </line>
<line>GLY CA 12.17 14.58 12.34 10.25 6.66 3.79 </line>
<line>GLY CA 9.65 11.40 8.75 6.91 3.78 </line>
<line>ALA CA 6.04 8.08 6.25 3.82 </line>
<line>PRO CA 5.14 5.54 3.82 </line>
<line>LEU CA 5.51 3.81 </line>
<line>ALA CA 3.83 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>TYR CA 204</line>
<line>GLY CA 215</line>
<line>LEU CA 236</line>
<line>GLY CA 218</line>
<line>GLY CA 215</line>
<line>ALA CA 221</line>
<line>PRO CA 210</line>
<line>LEU CA 260</line>
<line>ALA CA 251</line>
<line>LYS CA 279</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AIJ</pdbID>
<pdbChain>S</pdbChain>
<entryIDChain>1AIJS</entryIDChain>
<sequence>YGLSFAAPLKE</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 9523 CA TYR S 101 11.254 69.803 15.128 1.00 34.69 C </line>
<line>ATOM 9535 CA GLY S 102 10.501 66.355 13.636 1.00 31.68 C </line>
<line>ATOM 9539 CA LEU S 103 13.706 64.968 12.165 1.00 33.25 C </line>
<line>ATOM 9547 CA SER S 104 15.214 68.316 11.155 1.00 40.47 C </line>
<line>ATOM 9553 CA PHE S 105 18.630 69.391 12.324 1.00 39.96 C </line>
<line>ATOM 9564 CA ALA S 106 17.456 72.983 12.814 1.00 40.96 C </line>
<line>ATOM 9569 CA ALA S 107 17.029 72.666 16.586 1.00 40.98 C </line>
<line>ATOM 9574 CA PRO S 108 18.796 75.432 18.662 1.00 37.75 C </line>
<line>ATOM 9581 CA LEU S 109 21.775 74.097 20.637 1.00 34.99 C </line>
<line>ATOM 9589 CA LYS S 110 20.009 74.404 23.993 1.00 31.41 C </line>
<line>ATOM 9598 CA GLU S 111 16.856 72.755 22.566 1.00 36.70 C </line>
</atom-coordinate>
<distance-map>
<line> GLU LYS LEU PRO ALA ALA PHE SER LEU GLY TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 9.77 13.28 12.63 10.05 6.61 7.34 7.90 5.80 6.18 3.83 </line>
<line>GLY CA 12.69 16.20 15.36 13.28 9.55 9.64 8.78 5.68 3.79 </line>
<line>LEU CA 13.37 16.39 14.84 13.33 9.48 8.87 6.62 3.81 </line>
<line>SER CA 12.35 15.00 12.90 10.95 7.19 5.44 3.77 </line>
<line>PHE CA 10.93 12.77 10.06 8.76 5.61 3.81 </line>
<line>ALA CA 9.77 11.55 9.01 6.48 3.81 </line>
<line>ALA CA 5.98 8.17 6.40 3.88 </line>
<line>PRO CA 5.12 5.56 3.82 </line>
<line>LEU CA 5.45 3.80 </line>
<line>LYS CA 3.83 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>TYR CA 214</line>
<line>GLY CA 227</line>
<line>LEU CA 254</line>
<line>SER CA 234</line>
<line>PHE CA 241</line>
<line>ALA CA 187</line>
<line>ALA CA 228</line>
<line>PRO CA 209</line>
<line>LEU CA 262</line>
<line>LYS CA 265</line>
<line>GLU CA 281</line>
</n14>
</entryChain>
<parallel>
<x>-24.74799919128418</x>
<y>25.847000122070312</y>
<z>24.283000946044922</z>
</parallel>
<rotation>
<x>-0.21400000154972076</x>
<y>-0.45399999618530273</y>
<z>-0.8650000095367432</z>
<x>-0.7580000162124634</x>
<y>0.6349999904632568</y>
<z>-0.1459999978542328</z>
<x>0.6159999966621399</x>
<y>0.625</y>
<z>-0.47999998927116394</z>
</rotation>
<rmsd>0.6186879873275757</rmsd>
<dmax>1.437276005744934</dmax>
</indel>