NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AJ9A-2ZLWD
confEVID 1AJ9A-2ZLWD
pdbIDA 1AJ9
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.42179998755455
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSSQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHH GGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHHH GGGHHHH HHHHHIIIII HHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AJ9</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AJ9A</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HH GGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 93 CA TRP A 14 33.268 46.625 20.260 1.00 27.76 C </line>
<line>ATOM 107 CA GLY A 15 33.412 49.423 22.853 1.00 27.85 C </line>
<line>ATOM 111 CA LYS A 16 30.209 48.404 24.641 1.00 28.35 C </line>
<line>ATOM 120 CA VAL A 17 31.491 44.765 24.907 1.00 27.16 C </line>
<line>ATOM 127 CA GLY A 18 34.420 45.892 27.045 1.00 28.35 C </line>
<line>ATOM 131 CA ALA A 19 35.418 43.561 29.882 1.00 28.78 C </line>
<line>ATOM 136 CA HIS A 20 33.074 40.852 28.598 1.00 28.87 C </line>
<line>ATOM 146 CA ALA A 21 34.833 40.403 25.231 1.00 26.98 C </line>
<line>ATOM 151 CA GLY A 22 36.371 37.169 26.558 1.00 25.33 C </line>
<line>ATOM 155 CA GLU A 23 33.241 35.680 28.024 1.00 24.09 C </line>
<line>ATOM 164 CA TYR A 24 31.409 36.426 24.732 1.00 22.47 C </line>
<line>ATOM 176 CA GLY A 25 34.210 34.643 22.929 1.00 21.38 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.31 11.29 13.42 11.78 8.12 10.14 10.32 6.92 5.31 5.63 3.82 </line>
<line>GLY CA 14.80 13.28 14.68 13.14 9.44 10.32 9.37 5.57 5.44 3.81 </line>
<line>LYS CA 14.43 12.04 13.51 12.96 9.26 8.99 8.83 5.46 3.87 </line>
<line>VAL CA 10.67 8.34 9.76 9.18 5.50 5.61 6.45 3.80 </line>
<line>GLY CA 11.98 10.20 10.33 8.95 5.80 5.44 3.81 </line>
<line>ALA CA 11.37 9.67 8.38 7.27 5.65 3.81 </line>
<line>HIS CA 8.48 6.11 5.21 5.35 3.83 </line>
<line>ALA CA 6.23 5.27 5.71 3.82 </line>
<line>GLY CA 4.92 5.34 3.76 </line>
<line>GLU CA 5.29 3.84 </line>
<line>TYR CA 3.78 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 377</line>
<line>GLY CA 249</line>
<line>LYS CA 242</line>
<line>VAL CA 307</line>
<line>GLY CA 213</line>
<line>ALA CA 190</line>
<line>HIS CA 252</line>
<line>ALA CA 314</line>
<line>GLY CA 286</line>
<line>GLU CA 306</line>
<line>TYR CA 364</line>
<line>GLY CA 400</line>
</n14>
</entryChain>
<parallel>
<x>-70.51000213623047</x>
<y>-32.51100158691406</y>
<z>2.740999937057495</z>
</parallel>
<rotation>
<x>0.01899999938905239</x>
<y>0.6800000071525574</y>
<z>0.7329999804496765</z>
<x>-0.44699999690055847</x>
<y>0.6610000133514404</y>
<z>-0.6029999852180481</z>
<x>-0.8939999938011169</x>
<y>-0.3160000145435333</y>
<z>0.31700000166893005</z>
</rotation>
<rmsd>1.6394100189208984</rmsd>
<dmax>3.321898937225342</dmax>
</indel>