NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AKIA-2MEIA
confEVID 1AKIA-2MEIA
pdbIDA 1AKI
pdbIDB 2MEI
pdbChainA A
pdbChainB A
identity 0.592299997806549
indelSize 1
alignment <alignment>
<seq1>KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNT-DGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL</seq1>
<seq2>KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQYNSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV</seq2>
<ss_1> HHHHHHHHHH GGG HHHHHHHHHH EEEEE - EEEEE EE GGGG HHHHHHHHHHH GGGG HHHHH GGG </ss_1>
<ss_2> HHHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EE GGGGG HHHHHHHHHGGG GGGG HHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AKI</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AKIA</entryIDChain>
<sequence>TNRNT-DGSTD</sequence>
<secondary-structure>EEEE - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 333 CA THR A 43 24.441 27.490 -11.476 1.00 17.73 C </line>
<line>ATOM 340 CA ASN A 44 20.640 27.497 -11.108 1.00 19.51 C </line>
<line>ATOM 348 CA ARG A 45 18.303 30.363 -12.015 1.00 18.37 C </line>
<line>ATOM 359 CA ASN A 46 15.304 31.071 -9.782 1.00 20.10 C </line>
<line>ATOM 367 CA THR A 47 11.871 32.654 -10.246 1.00 19.12 C </line>
<line>ATOM 374 CA ASP A 48 12.885 35.716 -8.168 1.00 17.33 C </line>
<line>ATOM 382 CA GLY A 49 15.744 36.702 -10.546 1.00 17.27 C </line>
<line>ATOM 386 CA SER A 50 18.435 35.225 -8.279 1.00 14.28 C </line>
<line>ATOM 392 CA THR A 51 20.970 32.557 -9.202 1.00 13.82 C </line>
<line>ATOM 399 CA ASP A 52 22.528 29.900 -6.959 1.00 13.43 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR SER GLY ASP THR ASN ARG ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 5.47 6.55 10.30 12.70 14.57 13.64 9.96 6.80 3.82 </line>
<line>ASN CA 5.15 5.42 8.52 10.44 11.68 10.21 6.56 3.81 </line>
<line>ARG CA 6.61 4.45 6.13 6.99 8.53 7.05 3.81 </line>
<line>ASN CA 7.84 5.89 5.41 5.70 5.48 3.81 </line>
<line>THR CA 11.49 9.16 7.32 5.61 3.84 </line>
<line>ASP CA 11.33 8.74 5.57 3.85 </line>
<line>GLY CA 10.25 6.80 3.82 </line>
<line>SER CA 6.84 3.79 </line>
<line>THR CA 3.81 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>THR CA 290</line>
<line>ASN CA 269</line>
<line>ARG CA 213</line>
<line>ASN CA 202</line>
<line>THR CA 140</line>
<line>ASP CA 169</line>
<line>GLY CA 198</line>
<line>SER CA 265</line>
<line>THR CA 318</line>
<line>ASP CA 410</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2MEI</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2MEIA</entryIDChain>
<sequence>TNYNAGDRSTD</sequence>
<secondary-structure>EEEE EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 343 CA THR A 43 3.070 8.498 26.490 1.00 21.04 C </line>
<line>ATOM 350 CA ASN A 44 4.393 4.965 26.265 1.00 19.62 C </line>
<line>ATOM 358 CA TYR A 45 3.202 2.085 28.403 1.00 15.03 C </line>
<line>ATOM 370 CA ASN A 46 5.871 -0.510 29.260 1.00 14.57 C </line>
<line>ATOM 378 CA ALA A 47 3.911 -3.751 29.550 1.00 14.40 C </line>
<line>ATOM 383 CA GLY A 48 6.891 -5.686 30.868 1.00 15.41 C </line>
<line>ATOM 387 CA ASP A 49 7.033 -3.779 34.175 1.00 14.22 C </line>
<line>ATOM 395 CA ARG A 50 3.766 -1.833 34.429 1.00 16.92 C </line>
<line>ATOM 406 CA SER A 51 5.312 1.621 34.194 1.00 13.16 C </line>
<line>ATOM 412 CA THR A 52 4.571 4.414 31.706 1.00 10.59 C </line>
<line>ATOM 419 CA ASP A 53 6.836 7.120 30.228 1.00 11.19 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR SER ARG ASP GLY ALA ASN TYR ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 5.48 6.79 10.57 13.05 15.02 15.33 12.65 9.83 6.69 3.78 </line>
<line>ASN CA 5.13 5.47 8.65 10.64 12.08 11.87 9.33 6.41 3.78 </line>
<line>TYR CA 6.47 4.27 6.18 7.21 9.08 8.95 5.99 3.82 </line>
<line>ASN CA 7.75 5.65 5.40 5.74 6.02 5.52 3.80 </line>
<line>ALA CA 11.28 8.47 7.24 5.24 5.58 3.79 </line>
<line>GLY CA 12.82 10.40 8.18 6.11 3.82 </line>
<line>ASP CA 11.59 8.90 5.67 3.81 </line>
<line>ARG CA 10.36 6.86 3.79 </line>
<line>SER CA 6.95 3.81 </line>
<line>THR CA 3.83 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>THR CA 292</line>
<line>ASN CA 259</line>
<line>TYR CA 226</line>
<line>ASN CA 197</line>
<line>ALA CA 142</line>
<line>GLY CA 120</line>
<line>ASP CA 160</line>
<line>ARG CA 195</line>
<line>SER CA 260</line>
<line>THR CA 315</line>
<line>ASP CA 408</line>
</n14>
</entryChain>
<parallel>
<x>12.633000373840332</x>
<y>31.17799949645996</y>
<z>-40.54800033569336</z>
</parallel>
<rotation>
<x>-0.1340000033378601</x>
<y>-0.20399999618530273</y>
<z>0.9700000286102295</z>
<x>0.9789999723434448</x>
<y>-0.18000000715255737</y>
<z>0.09799999743700027</z>
<x>0.15399999916553497</x>
<y>0.9620000123977661</y>
<z>0.2240000069141388</z>
</rotation>
<rmsd>0.6928380131721497</rmsd>
<dmax>1.475335955619812</dmax>
</indel>