NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ANFA-3F5FA
confEVID 1ANFA-3F5FA
pdbIDA 1ANF
pdbIDB 3F5F
pdbChainA A
pdbChainB A
identity 0.649600028991699
indelSize 2
alignment <alignment>
<seq1>KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYE-NGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RITK-------------------------------------------------------------------------------------------------------------</seq1>
<seq2>KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIK-DVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAADEEDDVVIIYNRVPKTASTSFTNIAYDLCAKNRYHVLHINTTKNNPVMSLQDQVRFVKNVTSWKEMKPGFYHGHVSYLDFAKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAAGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWALEQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGKKSHLRKTTEKKLPTAATIAKLQQSEIWKMENEFYEFALEQFQFVRAHAVREKDGELYILAQNFFYEKIYPK</seq2>
<ss_1> EEEE HHHHHHHHHHHH EEE HHHHHHHH EEEEEEEGGHHHHHH HHHGGG GGG EEEEEE EEEEE HHHHHHHHH HHHH EEE- EEE EEE HHHHHHHHHHHHHHH HHHHHHHH EEEEE HHHHHH EEEEE EEEEEEEEE HHHHHHHIIIII HHHHHHHH EEEEHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HH -------------------------------------------------------------------------------------------------------------</ss_1>
<ss_2> EEEE HHHHHHHHHHHHH EEE HHHHHHHH EEEEEEE HHHHHH HHHGGG HHHH EEEEEE EEEEEHHHH HHHHHHHHH HHHH EEE- HHHHHHHHHHHHHHH HHHHHHHHH EEEEE HHHHHH EEEEE EE EEEEEEEEE HHHHHHHIIIII HHHHHHHH EEE HHHHHHGGG HHHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHGGG EEEE HHHHHHHHHHHH EEE GGG HHHHHHHHHHHHH GGG EEEEE EEEEEE HHHHHHHHHHHH HHHHHH HHHHH GGGG HHHHHHHHHHHH EEEEGGGHHHHHHHHHHH HHHHHH HHHHHHGGG HHHHHHHHHHHHHHHHHHHHHH EEEEE EEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ANF</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ANFA</entryIDChain>
<sequence>AFKYE-NGKYD</sequence>
<secondary-structure> EEE- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1314 CA ALA A 168 21.333 16.559 49.663 1.00 17.55 C </line>
<line>ATOM 1319 CA PHE A 169 21.056 16.599 53.545 1.00 18.18 C </line>
<line>ATOM 1330 CA LYS A 170 23.008 14.346 55.852 1.00 19.52 C </line>
<line>ATOM 1339 CA TYR A 171 20.700 11.975 57.710 1.00 34.77 C </line>
<line>ATOM 1351 CA GLU A 172 22.138 11.971 61.270 1.00 44.84 C </line>
<line>ATOM 1360 CA ASN A 173 20.508 10.338 64.364 1.00 56.20 C </line>
<line>ATOM 1368 CA GLY A 174 16.875 10.139 63.369 1.00 51.08 C </line>
<line>ATOM 1372 CA LYS A 175 16.866 13.341 61.398 1.00 39.57 C </line>
<line>ATOM 1381 CA TYR A 176 18.196 15.411 58.561 1.00 27.31 C </line>
<line>ATOM 1393 CA ASP A 177 20.814 18.013 59.325 1.00 21.72 C </line>
</atom-coordinate>
<distance-map>
<line> ASP TYR LYS GLY ASN GLU TYR LYS PHE ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 9.78 9.50 12.96 15.78 15.98 12.51 9.28 6.78 3.89 </line>
<line>PHE CA 5.96 5.90 9.48 12.48 12.51 9.07 6.23 3.77 </line>
<line>LYS CA 5.51 5.62 8.34 10.57 9.73 5.98 3.79 </line>
<line>TYR CA 6.25 4.34 5.49 7.07 6.86 3.84 </line>
<line>GLU CA 6.48 5.89 5.45 5.95 3.86 </line>
<line>ASN CA 9.19 8.05 5.57 3.77 </line>
<line>GLY CA 9.69 7.26 3.76 </line>
<line>LYS CA 6.46 3.76 </line>
<line>TYR CA 3.77 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>ALA CA 473</line>
<line>PHE CA 374</line>
<line>LYS CA 283</line>
<line>TYR CA 233</line>
<line>GLU CA 150</line>
<line>ASN CA 100</line>
<line>GLY CA 154</line>
<line>LYS CA 225</line>
<line>TYR CA 282</line>
<line>ASP CA 240</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3F5F</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>3F5FA</entryIDChain>
<sequence>AFKYENGKYDI</sequence>
<secondary-structure> EE</secondary-structure>
<atom-coordinate>
<line>ATOM 1324 CA ALA A 168 94.453 67.256 15.453 1.00 56.40 C </line>
<line>ATOM 1329 CA PHE A 169 96.733 64.235 15.581 1.00 65.48 C </line>
<line>ATOM 1340 CA LYS A 170 100.047 66.066 15.250 1.00 77.32 C </line>
<line>ATOM 1345 CA TYR A 171 102.362 64.255 12.808 1.00 86.26 C </line>
<line>ATOM 1350 CA GLU A 172 105.007 62.415 14.861 1.00 91.24 C </line>
<line>ATOM 1355 CA ASN A 173 107.587 59.685 14.204 1.00 92.62 C </line>
<line>ATOM 1363 CA GLY A 174 109.487 57.043 16.166 1.00 89.15 C </line>
<line>ATOM 1367 CA LYS A 175 109.482 53.315 16.947 1.00 85.13 C </line>
<line>ATOM 1372 CA TYR A 176 105.981 54.024 18.236 1.00 80.80 C </line>
<line>ATOM 1384 CA ASP A 177 102.860 55.858 17.067 1.00 78.59 C </line>
<line>ATOM 1392 CA ILE A 178 100.926 58.495 19.020 1.00 73.30 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ASP TYR LYS GLY ASN GLU TYR LYS PHE ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 11.46 14.25 17.77 20.55 18.19 15.21 11.63 8.86 5.72 3.79 </line>
<line>PHE CA 7.90 10.48 14.03 16.84 14.65 11.85 8.50 6.27 3.80 </line>
<line>LYS CA 8.50 10.74 13.75 15.95 13.09 9.93 6.17 3.82 </line>
<line>TYR CA 8.59 9.43 12.13 13.69 10.68 7.08 3.82 </line>
<line>GLU CA 7.02 7.24 9.10 10.35 7.12 3.81 </line>
<line>ASN CA 8.31 6.72 7.13 7.19 3.80 </line>
<line>GLY CA 9.14 6.79 5.07 3.81 </line>
<line>LYS CA 10.21 7.09 3.80 </line>
<line>TYR CA 6.79 3.80 </line>
<line>ASP CA 3.81 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ALA CA 453</line>
<line>PHE CA 383</line>
<line>LYS CA 315</line>
<line>TYR CA 285</line>
<line>GLU CA 214</line>
<line>ASN CA 152</line>
<line>GLY CA 124</line>
<line>LYS CA 109</line>
<line>TYR CA 144</line>
<line>ASP CA 201</line>
<line>ILE CA 236</line>
</n14>
</entryChain>
<parallel>
<x>-82.63300323486328</x>
<y>-47.917999267578125</y>
<z>42.73400115966797</z>
</parallel>
<rotation>
<x>0.39800000190734863</x>
<y>-0.3709999918937683</y>
<z>0.8389999866485596</z>
<x>0.9110000133514404</x>
<y>0.2669999897480011</y>
<z>-0.3140000104904175</z>
<x>-0.1080000028014183</x>
<y>0.8889999985694885</y>
<z>0.4440000057220459</z>
</rotation>
<rmsd>2.6056160926818848</rmsd>
<dmax>3.7251410484313965</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>3F5F</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>3F5FA</entryIDChain>
<sequence>KYDIK-DVGVD</sequence>
<secondary-structure> EEE- </secondary-structure>
<atom-coordinate>
<line>ATOM 1367 CA LYS A 175 109.482 53.315 16.947 1.00 85.13 C </line>
<line>ATOM 1372 CA TYR A 176 105.981 54.024 18.236 1.00 80.80 C </line>
<line>ATOM 1384 CA ASP A 177 102.860 55.858 17.067 1.00 78.59 C </line>
<line>ATOM 1392 CA ILE A 178 100.926 58.495 19.020 1.00 73.30 C </line>
<line>ATOM 1400 CA LYS A 179 97.295 59.551 19.264 1.00 64.54 C </line>
<line>ATOM 1409 CA ASP A 180 96.400 62.948 20.705 1.00 57.42 C </line>
<line>ATOM 1417 CA VAL A 181 93.615 65.335 19.631 1.00 48.36 C </line>
<line>ATOM 1424 CA GLY A 182 93.608 68.964 20.708 1.00 46.41 C </line>
<line>ATOM 1428 CA VAL A 183 90.509 71.051 20.064 1.00 45.08 C </line>
<line>ATOM 1435 CA ASP A 184 89.692 72.005 23.677 1.00 48.96 C </line>
</atom-coordinate>
<distance-map>
<line> ASP VAL GLY VAL ASP LYS ILE ASP TYR LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 28.04 26.16 22.61 20.09 16.68 13.88 10.21 7.09 3.80 </line>
<line>TYR CA 24.86 23.08 19.56 16.82 13.32 10.35 6.79 3.80 </line>
<line>ASP CA 21.86 19.81 16.45 13.49 10.26 7.03 3.81 </line>
<line>ILE CA 18.18 16.35 12.88 10.03 6.57 3.79 </line>
<line>LYS CA 15.24 13.38 10.21 6.87 3.80 </line>
<line>ASP CA 11.66 10.04 6.63 3.82 </line>
<line>VAL CA 8.73 6.52 3.79 </line>
<line>GLY CA 5.78 3.79 </line>
<line>VAL CA 3.83 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>LYS CA 109</line>
<line>TYR CA 144</line>
<line>ASP CA 201</line>
<line>ILE CA 236</line>
<line>LYS CA 293</line>
<line>ASP CA 308</line>
<line>VAL CA 402</line>
<line>GLY CA 420</line>
<line>VAL CA 475</line>
<line>ASP CA 428</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ANF</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ANFA</entryIDChain>
<sequence>GKYDIKDVGVD</sequence>
<secondary-structure> EEE EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 1368 CA GLY A 174 16.875 10.139 63.369 1.00 51.08 C </line>
<line>ATOM 1372 CA LYS A 175 16.866 13.341 61.398 1.00 39.57 C </line>
<line>ATOM 1381 CA TYR A 176 18.196 15.411 58.561 1.00 27.31 C </line>
<line>ATOM 1393 CA ASP A 177 20.814 18.013 59.325 1.00 21.72 C </line>
<line>ATOM 1401 CA ILE A 178 19.766 21.042 57.269 1.00 21.01 C </line>
<line>ATOM 1409 CA LYS A 179 23.180 22.617 57.631 1.00 20.35 C </line>
<line>ATOM 1418 CA ASP A 180 25.063 19.533 56.391 1.00 18.28 C </line>
<line>ATOM 1426 CA VAL A 181 24.697 19.586 52.544 1.00 19.42 C </line>
<line>ATOM 1433 CA GLY A 182 26.819 17.629 49.970 1.00 17.47 C </line>
<line>ATOM 1437 CA VAL A 183 26.238 19.575 46.845 1.00 19.05 C </line>
<line>ATOM 1444 CA ASP A 184 29.700 21.035 46.686 1.00 21.61 C </line>
</atom-coordinate>
<distance-map>
<line> ASP VAL GLY VAL ASP LYS ILE ASP TYR LYS GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 23.70 21.21 18.29 16.36 14.28 15.11 12.82 9.69 7.26 3.76 </line>
<line>LYS CA 20.98 18.40 15.75 13.37 11.43 11.84 9.21 6.46 3.76 </line>
<line>TYR CA 17.46 14.81 12.37 9.79 8.30 8.81 5.99 3.77 </line>
<line>ASP CA 15.74 13.70 11.12 7.97 5.38 5.45 3.81 </line>
<line>ILE CA 14.51 12.36 10.71 6.98 5.58 3.78 </line>
<line>LYS CA 12.84 11.62 9.84 6.11 3.82 </line>
<line>ASP CA 10.86 9.62 6.92 3.86 </line>
<line>VAL CA 7.84 5.90 3.87 </line>
<line>GLY CA 5.54 3.73 </line>
<line>VAL CA 3.76 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>GLY CA 154</line>
<line>LYS CA 225</line>
<line>TYR CA 282</line>
<line>ASP CA 240</line>
<line>ILE CA 283</line>
<line>LYS CA 248</line>
<line>ASP CA 267</line>
<line>VAL CA 365</line>
<line>GLY CA 391</line>
<line>VAL CA 447</line>
<line>ASP CA 360</line>
</n14>
</entryChain>
<parallel>
<x>78.88400268554688</x>
<y>42.9739990234375</y>
<z>-38.40599822998047</z>
</parallel>
<rotation>
<x>-0.03999999910593033</x>
<y>0.6399999856948853</y>
<z>0.7670000195503235</z>
<x>-0.9100000262260437</x>
<y>-0.3400000035762787</y>
<z>0.23600000143051147</z>
<x>0.41200000047683716</x>
<y>-0.6890000104904175</y>
<z>0.5960000157356262</z>
</rotation>
<rmsd>2.1384780406951904</rmsd>
<dmax>2.9963951110839844</dmax>
</indel>