NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ANTI-1E04L
confEVID 1ANTI-1E04L
pdbIDA 1ANT
pdbIDB 1E04
pdbChainA I
pdbChainB L
identity 0.953100025653839
indelSize 3
alignment <alignment>
<seq1>---------RDIPMNPMCIYRSPEKKATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEAASTA-----VVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCVK</seq1>
<seq2>VDICTAKPRDIPMNPM-CIYRSPEEA-TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPC--</seq2>
<ss_1>--------- HHHHHHHHHHHHHHHHHHHHHH EEE HHHHHHHHHHGGGG HHHHHHHHHEEGGG HHHHHHHHHHHHH EEEEEEEEEEE HHHHHHHHH HHHHHHHHHHHHHHH EEEEEEEEEEE EEEEEEEEEEEEEEGGGEEEEEE EEEEEEE HHHHHH HHHHHHH EEEEEEEEE EEEEEEEEEHHHHHH EEEEEEEEEE ----- EEEEEEE EEEEE </ss_1>
<ss_2> - -HHHHHHHHHHHHHHHHHHHHHHHHH EEE HHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHHH EEEEEEEEEEEEE HHHHHHHHH HHHHHHHHHHHHHHH EEEEEEEEEEEEE EEEEEEE EEEEEEEEEEEEEEEEEEE EEEEEEEE EEEEEEEE HHHHHH HHHHHHHHH EEEEEEEEEEEEEEEEEEEEHHHHHH GGG EEEEEEEEEE EEEEEEEEEEEEE EEEEEEE EEEEEEEE --</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ANT</pdbID>
<pdbChain>I</pdbChain>
<entryIDChain>1ANTI</entryIDChain>
<sequence>AASTA-----VVIAG</sequence>
<secondary-structure> ----- </secondary-structure>
<atom-coordinate>
<line>ATOM 5989 CA ALA I 383 -10.320 15.616 4.599 1.00119.70 C </line>
<line>ATOM 5994 CA ALA I 384 -7.643 12.888 4.706 1.00101.29 C </line>
<line>ATOM 5999 CA SER I 385 -4.401 12.631 6.760 1.00108.76 C </line>
<line>ATOM 6005 CA THR I 386 -5.764 10.961 9.895 1.00 44.53 C </line>
<line>ATOM 6012 CA ALA I 387 -3.310 8.018 10.133 1.00 21.27 C </line>
<line>ATOM 6017 CA VAL I 388 -4.344 5.064 12.238 1.00 24.75 C </line>
<line>ATOM 6024 CA VAL I 389 -2.568 3.157 15.080 1.00 19.31 C </line>
<line>ATOM 6031 CA ILE I 390 -3.642 0.007 16.888 1.00 23.73 C </line>
<line>ATOM 6039 CA ALA I 391 -2.037 -1.551 19.923 1.00 22.09 C </line>
<line>ATOM 6044 CA GLY I 392 -2.436 -5.125 21.075 1.00 22.58 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ALA ILE VAL VAL ALA THR SER ALA ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 27.64 24.46 20.96 18.03 14.33 11.73 8.39 6.97 3.82 </line>
<line>ALA CA 24.89 21.71 18.17 15.10 11.35 8.48 5.85 3.85 </line>
<line>SER CA 22.89 19.49 16.20 12.74 9.34 5.82 3.80 </line>
<line>THR CA 19.87 16.46 13.17 9.90 6.50 3.84 </line>
<line>ALA CA 17.12 13.75 10.48 6.98 3.77 </line>
<line>VAL CA 13.62 10.40 6.91 3.86 </line>
<line>VAL CA 10.22 6.78 3.79 </line>
<line>ILE CA 6.73 3.77 </line>
<line>ALA CA 3.78 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>ALA CA 191</line>
<line>ALA CA 196</line>
<line>SER CA 147</line>
<line>THR CA 176</line>
<line>ALA CA 180</line>
<line>VAL CA 203</line>
<line>VAL CA 154</line>
<line>ILE CA 148</line>
<line>ALA CA 80</line>
<line>GLY CA 75</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1E04</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>1E04L</entryIDChain>
<sequence>EGSEAAASTAVVIAG</sequence>
<secondary-structure>EEEEEEEEEEEEE </secondary-structure>
<atom-coordinate>
<line>ATOM 6024 CA GLU L 378 4.912 -0.667 -34.346 1.00 40.37 C </line>
<line>ATOM 6033 CA GLY L 379 1.160 -1.276 -34.092 1.00 33.39 C </line>
<line>ATOM 6037 CA SER L 380 -1.709 -3.602 -34.971 1.00 35.37 C </line>
<line>ATOM 6043 CA GLU L 381 -3.170 -4.865 -38.274 1.00 36.65 C </line>
<line>ATOM 6052 CA ALA L 382 -6.620 -6.447 -38.659 1.00 27.75 C </line>
<line>ATOM 6057 CA ALA L 383 -8.714 -7.644 -41.616 1.00 31.48 C </line>
<line>ATOM 6062 CA ALA L 384 -12.067 -9.401 -42.035 1.00 26.50 C </line>
<line>ATOM 6067 CA SER L 385 -14.689 -10.465 -44.568 1.00 30.94 C </line>
<line>ATOM 6073 CA THR L 386 -18.279 -11.736 -44.536 1.00 33.45 C </line>
<line>ATOM 6080 CA ALA L 387 -19.761 -13.720 -47.414 1.00 33.53 C </line>
<line>ATOM 6085 CA VAL L 388 -23.496 -14.465 -47.614 1.00 34.27 C </line>
<line>ATOM 6092 CA VAL L 389 -24.198 -17.173 -50.214 1.00 35.74 C </line>
<line>ATOM 6099 CA ILE L 390 -27.662 -17.299 -51.813 1.00 40.62 C </line>
<line>ATOM 6107 CA ALA L 391 -28.582 -20.866 -52.822 1.00 43.90 C </line>
<line>ATOM 6112 CA GLY L 392 -25.220 -22.711 -52.730 1.00 51.18 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ALA ILE VAL VAL ALA THR SER ALA ALA ALA GLU SER GLY GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 41.62 43.26 40.53 37.04 34.26 30.82 27.64 24.18 20.58 16.95 13.60 9.92 7.27 3.81 </line>
<line>GLY CA 38.77 40.24 37.44 34.00 31.06 27.75 24.42 21.10 17.44 13.95 10.40 7.01 3.80 </line>
<line>SER CA 35.12 36.59 33.84 30.37 27.43 24.15 20.79 17.54 13.81 10.47 6.77 3.83 </line>
<line>GLU CA 31.84 33.37 30.62 27.13 24.34 20.91 17.74 14.27 10.67 7.04 3.81 </line>
<line>ALA CA 28.43 29.85 27.08 23.61 20.72 17.38 14.09 10.78 7.06 3.82 </line>
<line>ALA CA 24.96 26.37 23.58 20.11 17.35 13.88 10.81 7.24 3.81 </line>
<line>ALA CA 21.55 22.82 20.03 16.57 13.69 10.33 7.09 3.80 </line>
<line>SER CA 18.10 19.22 16.36 12.93 10.14 6.66 3.81 </line>
<line>THR CA 15.35 16.07 13.11 9.84 6.64 3.80 </line>
<line>ALA CA 11.79 12.57 9.73 6.28 3.81 </line>
<line>VAL CA 9.86 9.69 6.56 3.82 </line>
<line>VAL CA 6.17 6.30 3.82 </line>
<line>ILE CA 6.01 3.82 </line>
<line>ALA CA 3.84 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>GLU CA 327</line>
<line>GLY CA 414</line>
<line>SER CA 468</line>
<line>GLU CA 447</line>
<line>ALA CA 519</line>
<line>ALA CA 514</line>
<line>ALA CA 555</line>
<line>SER CA 561</line>
<line>THR CA 577</line>
<line>ALA CA 587</line>
<line>VAL CA 580</line>
<line>VAL CA 549</line>
<line>ILE CA 530</line>
<line>ALA CA 414</line>
<line>GLY CA 405</line>
</n14>
</entryChain>
<parallel>
<x>4.848999977111816</x>
<y>16.767000198364258</y>
<z>51.28499984741211</z>
</parallel>
<rotation>
<x>-0.41600000858306885</x>
<y>0.9089999794960022</y>
<z>0.0020000000949949026</z>
<x>-0.5839999914169312</x>
<y>-0.26600000262260437</y>
<z>-0.765999972820282</z>
<x>0.6959999799728394</x>
<y>0.3199999928474426</y>
<z>-0.6420000195503235</z>
</rotation>
<rmsd>8.983672142028809</rmsd>
<dmax>11.906015396118164</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1E04</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>1E04L</entryIDChain>
<sequence>PMNPM-CIYRS</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 3266 CA PRO L 16 -35.810 7.965 -52.835 1.00120.09 C </line>
<line>ATOM 3273 CA MET L 17 -34.566 4.569 -51.642 1.00109.62 C </line>
<line>ATOM 3281 CA ASN L 18 -37.532 2.269 -51.935 1.00103.59 C </line>
<line>ATOM 3289 CA PRO L 19 -36.879 -1.360 -50.998 1.00 95.24 C </line>
<line>ATOM 3296 CA MET L 20 -39.705 -3.807 -51.783 1.00 79.82 C </line>
<line>ATOM 3304 CA CYS L 21 -41.067 -4.522 -48.300 1.00 69.43 C </line>
<line>ATOM 3310 CA ILE L 22 -41.047 -2.363 -45.147 1.00 73.03 C </line>
<line>ATOM 3318 CA TYR L 23 -41.318 -3.377 -41.451 1.00 80.78 C </line>
<line>ATOM 3330 CA ARG L 24 -42.473 -1.277 -38.486 1.00 93.84 C </line>
<line>ATOM 3334 CA SER L 25 -40.463 -1.587 -35.256 1.00109.40 C </line>
</atom-coordinate>
<distance-map>
<line> SER ARG TYR ILE CYS MET PRO ASN MET PRO </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>PRO CA 20.54 18.32 16.99 13.90 14.29 12.44 9.56 6.02 3.81 </line>
<line>MET CA 18.47 16.42 14.58 11.50 11.67 9.83 6.40 3.76 </line>
<line>ASN CA 17.37 14.76 12.50 8.94 8.48 6.45 3.80 </line>
<line>PRO CA 16.15 13.71 10.72 7.25 5.90 3.82 </line>
<line>MET CA 16.69 13.82 10.47 6.92 3.81 </line>
<line>CYS CA 13.38 10.43 6.95 3.82 </line>
<line>ILE CA 9.94 6.90 3.84 </line>
<line>TYR CA 6.50 3.81 </line>
<line>ARG CA 3.82 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>PRO CA 239</line>
<line>MET CA 334</line>
<line>ASN CA 298</line>
<line>PRO CA 356</line>
<line>MET CA 292</line>
<line>CYS CA 296</line>
<line>ILE CA 301</line>
<line>TYR CA 307</line>
<line>ARG CA 248</line>
<line>SER CA 261</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ANT</pdbID>
<pdbChain>I</pdbChain>
<entryIDChain>1ANTI</entryIDChain>
<sequence>IPMNPMCIYRS</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 3161 CA ILE I 15 -53.393 19.918 8.233 1.00 88.81 C </line>
<line>ATOM 3169 CA PRO I 16 -52.377 19.894 4.529 1.00122.18 C </line>
<line>ATOM 3176 CA MET I 17 -55.823 20.628 3.041 1.00142.90 C </line>
<line>ATOM 3184 CA ASN I 18 -57.026 19.453 -0.375 1.00155.95 C </line>
<line>ATOM 3192 CA PRO I 19 -60.066 20.102 -2.670 1.00156.59 C </line>
<line>ATOM 3199 CA MET I 20 -61.838 17.666 -5.080 1.00148.59 C </line>
<line>ATOM 3207 CA CYS I 21 -58.733 16.024 -6.547 1.00 84.47 C </line>
<line>ATOM 3213 CA ILE I 22 -57.915 13.348 -3.934 1.00 55.97 C </line>
<line>ATOM 3221 CA TYR I 23 -57.564 9.917 -5.519 1.00 54.38 C </line>
<line>ATOM 3233 CA ARG I 24 -58.559 6.809 -3.596 1.00 73.52 C </line>
<line>ATOM 3244 CA SER I 25 -55.864 4.138 -3.189 1.00 62.42 C </line>
</atom-coordinate>
<distance-map>
<line> SER ARG TYR ILE CYS MET PRO ASN MET PRO ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 19.64 18.40 17.51 14.55 16.19 15.93 12.78 9.35 5.78 3.84 </line>
<line>PRO CA 17.89 16.60 15.08 12.05 13.34 13.67 10.54 6.77 3.82 </line>
<line>MET CA 17.63 15.57 13.82 10.30 11.03 10.53 7.13 3.81 </line>
<line>ASN CA 15.61 13.14 10.85 7.12 7.26 6.96 3.86 </line>
<line>PRO CA 16.52 13.41 10.87 7.20 5.78 3.86 </line>
<line>MET CA 14.91 11.44 8.86 5.95 3.81 </line>
<line>CYS CA 12.68 9.68 6.30 3.83 </line>
<line>ILE CA 9.46 6.58 3.80 </line>
<line>TYR CA 6.46 3.79 </line>
<line>ARG CA 3.82 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>ILE CA 225</line>
<line>PRO CA 310</line>
<line>MET CA 272</line>
<line>ASN CA 290</line>
<line>PRO CA 222</line>
<line>MET CA 193</line>
<line>CYS CA 284</line>
<line>ILE CA 319</line>
<line>TYR CA 326</line>
<line>ARG CA 284</line>
<line>SER CA 294</line>
</n14>
</entryChain>
<parallel>
<x>18.121999740600586</x>
<y>-17.48900032043457</y>
<z>-48.85599899291992</z>
</parallel>
<rotation>
<x>0.9039999842643738</x>
<y>0.22300000488758087</y>
<z>0.36399999260902405</z>
<x>0.4129999876022339</x>
<y>-0.23999999463558197</y>
<z>-0.878000020980835</z>
<x>-0.10899999737739563</x>
<y>0.9449999928474426</y>
<z>-0.3089999854564667</z>
</rotation>
<rmsd>1.093662977218628</rmsd>
<dmax>2.175386905670166</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1E04</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>1E04L</entryIDChain>
<sequence>SPEEA-TNRRV</sequence>
<secondary-structure> -HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3334 CA SER L 25 -40.463 -1.587 -35.256 1.00109.40 C </line>
<line>ATOM 3340 CA PRO L 26 -42.768 -0.985 -32.283 1.00114.31 C </line>
<line>ATOM 3347 CA GLU L 27 -42.224 1.328 -29.316 1.00105.93 C </line>
<line>ATOM 3356 CA GLU L 42 -29.599 16.480 -34.277 1.00100.42 C </line>
<line>ATOM 3361 CA ALA L 43 -31.846 13.739 -35.681 1.00 97.97 C </line>
<line>ATOM 3366 CA THR L 44 -29.320 11.781 -37.779 1.00 90.40 C </line>
<line>ATOM 3373 CA ASN L 45 -26.499 12.002 -35.208 1.00 72.10 C </line>
<line>ATOM 3381 CA ARG L 46 -28.808 10.356 -32.642 1.00 61.87 C </line>
<line>ATOM 3388 CA ARG L 47 -29.864 7.697 -35.173 1.00 61.76 C </line>
<line>ATOM 3399 CA VAL L 48 -26.250 6.964 -36.236 1.00 52.88 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ARG ARG ASN THR ALA GLU GLU PRO SER </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 16.62 14.09 16.89 19.48 17.59 17.59 21.10 6.85 3.81 </line>
<line>PRO CA 18.75 15.82 17.99 21.02 19.34 18.64 21.96 3.80 </line>
<line>GLU CA 18.30 15.09 16.51 19.90 18.64 17.39 20.34 </line>
<line>GLU CA 10.28 8.83 6.39 5.53 5.87 3.81 </line>
<line>ALA CA 8.80 6.38 5.47 5.64 3.82 </line>
<line>THR CA 5.92 4.88 5.36 3.82 </line>
<line>ASN CA 5.15 5.46 3.82 </line>
<line>ARG CA 5.56 3.82 </line>
<line>ARG CA 3.84 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>SER CA 261</line>
<line>PRO CA 163</line>
<line>GLU CA 131</line>
<line>GLU CA 133</line>
<line>ALA CA 191</line>
<line>THR CA 286</line>
<line>ASN CA 275</line>
<line>ARG CA 247</line>
<line>ARG CA 341</line>
<line>VAL CA 395</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ANT</pdbID>
<pdbChain>I</pdbChain>
<entryIDChain>1ANTI</entryIDChain>
<sequence>SPEKKATNRRV</sequence>
<secondary-structure> HH</secondary-structure>
<atom-coordinate>
<line>ATOM 3244 CA SER I 25 -55.864 4.138 -3.189 1.00 62.42 C </line>
<line>ATOM 3250 CA PRO I 26 -57.186 0.573 -3.539 1.00 67.67 C </line>
<line>ATOM 3257 CA GLU I 27 -57.742 -1.350 -0.311 1.00106.31 C </line>
<line>ATOM 3266 CA LYS I 28 -54.799 -3.732 -0.815 1.00154.71 C </line>
<line>ATOM 3275 CA LYS I 29 -52.007 -2.169 -2.925 1.00167.29 C </line>
<line>ATOM 3284 CA ALA I 43 -42.652 -4.192 12.223 1.00137.55 C </line>
<line>ATOM 3289 CA THR I 44 -45.104 -1.571 13.553 1.00161.01 C </line>
<line>ATOM 3296 CA ASN I 45 -48.093 0.314 12.039 1.00142.79 C </line>
<line>ATOM 3304 CA ARG I 46 -46.560 3.730 11.167 1.00 80.19 C </line>
<line>ATOM 3315 CA ARG I 47 -47.052 6.156 8.252 1.00 59.95 C </line>
<line>ATOM 3326 CA VAL I 48 -43.302 6.744 7.733 1.00 42.53 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ARG ARG ASN THR ALA LYS LYS GLU PRO SER </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 16.85 14.58 17.11 17.52 20.70 21.94 7.40 8.29 6.48 3.82 </line>
<line>PRO CA 18.92 16.52 18.42 18.04 21.04 21.96 5.89 5.63 3.80 </line>
<line>GLU CA 18.40 15.62 16.81 15.76 18.76 19.82 6.36 3.82 </line>
<line>LYS CA 17.75 15.49 16.34 15.05 17.47 17.83 3.83 </line>
<line>LYS CA 16.40 14.79 16.22 15.67 17.88 17.92 </line>
<line>ALA CA 11.84 11.93 8.90 7.07 3.83 </line>
<line>THR CA 10.31 9.57 5.99 3.84 </line>
<line>ASN CA 9.10 7.04 3.84 </line>
<line>ARG CA 5.61 3.82 </line>
<line>ARG CA 3.83 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>SER CA 294</line>
<line>PRO CA 208</line>
<line>GLU CA 165</line>
<line>LYS CA 175</line>
<line>LYS CA 245</line>
<line>ALA CA 159</line>
<line>THR CA 138</line>
<line>ASN CA 168</line>
<line>ARG CA 252</line>
<line>ARG CA 346</line>
<line>VAL CA 380</line>
</n14>
</entryChain>
<parallel>
<x>18.229000091552734</x>
<y>7.8979997634887695</y>
<z>-37.303001403808594</z>
</parallel>
<rotation>
<x>0.28200000524520874</x>
<y>0.4309999942779541</y>
<z>-0.8569999933242798</z>
<x>0.367000013589859</x>
<y>-0.8740000128746033</y>
<z>-0.3190000057220459</z>
<x>0.8859999775886536</x>
<y>0.22499999403953552</y>
<z>0.4050000011920929</z>
</rotation>
<rmsd>7.232913017272949</rmsd>
<dmax>12.634597778320312</dmax>
</indel>