NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ANTI-1OYHL
confEVID 1ANTI-1OYHL
pdbIDA 1ANT
pdbIDB 1OYH
pdbChainA I
pdbChainB L
identity 0.9307000041008
indelSize 3
alignment <alignment>
<seq1>---------RDIPMNPMCIYRSPEKKATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEAASTA----VVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCVK</seq1>
<seq2>VDICTAKPRDIPMNPM-CIYRSPEA--TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPRVTFKANRPFLVFIREVPLNTIIFMGRVANPC--</seq2>
<ss_1>--------- HHHHHHHHHHHHHHHHHHHHHH EEE HHHHHHHHHHGGGG HHHHHHHHHEEGGG HHHHHHHHHHHHH EEEEEEEEEEE HHHHHHHHH HHHHHHHHHHHHHHH EEEEEEEEEEE EEEEEEEEEEEEEEGGGEEEEEE EEEEEEE HHHHHH HHHHHHH EEEEEEEEE EEEEEEEEEHHHHHH EEEEEEEEEE ---- EEEEEEE EEEEE </ss_1>
<ss_2> - --HHHHHHHHHHHHHHHHHHHHHHHH EEE HHHHHHHHHHGGGG HHHHHHHHHH GGG HHHHHHHHHHHHHHHH EEE EEEEE HHHHHHHHH HHHH HHHHHHHHHHHHHH EEEEEEEEEEEEE EEEEEEE EEEEEEEEEEEEEEEEEEE EEEEEEEE EEEEEEEE HHHHH HHHHHHHH EEEEEEEEE EEEEEEEEEHHHHHH GGG EEEEEEEEEE EEEEEEEEEEEEE EEEEEEEE EEEEEEEE --</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ANT</pdbID>
<pdbChain>I</pdbChain>
<entryIDChain>1ANTI</entryIDChain>
<sequence>AASTA----VVIAG</sequence>
<secondary-structure> ---- </secondary-structure>
<atom-coordinate>
<line>ATOM 5989 CA ALA I 383 -10.320 15.616 4.599 1.00119.70 C </line>
<line>ATOM 5994 CA ALA I 384 -7.643 12.888 4.706 1.00101.29 C </line>
<line>ATOM 5999 CA SER I 385 -4.401 12.631 6.760 1.00108.76 C </line>
<line>ATOM 6005 CA THR I 386 -5.764 10.961 9.895 1.00 44.53 C </line>
<line>ATOM 6012 CA ALA I 387 -3.310 8.018 10.133 1.00 21.27 C </line>
<line>ATOM 6017 CA VAL I 388 -4.344 5.064 12.238 1.00 24.75 C </line>
<line>ATOM 6024 CA VAL I 389 -2.568 3.157 15.080 1.00 19.31 C </line>
<line>ATOM 6031 CA ILE I 390 -3.642 0.007 16.888 1.00 23.73 C </line>
<line>ATOM 6039 CA ALA I 391 -2.037 -1.551 19.923 1.00 22.09 C </line>
<line>ATOM 6044 CA GLY I 392 -2.436 -5.125 21.075 1.00 22.58 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ALA ILE VAL VAL ALA THR SER ALA ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 27.64 24.46 20.96 18.03 14.33 11.73 8.39 6.97 3.82 </line>
<line>ALA CA 24.89 21.71 18.17 15.10 11.35 8.48 5.85 3.85 </line>
<line>SER CA 22.89 19.49 16.20 12.74 9.34 5.82 3.80 </line>
<line>THR CA 19.87 16.46 13.17 9.90 6.50 3.84 </line>
<line>ALA CA 17.12 13.75 10.48 6.98 3.77 </line>
<line>VAL CA 13.62 10.40 6.91 3.86 </line>
<line>VAL CA 10.22 6.78 3.79 </line>
<line>ILE CA 6.73 3.77 </line>
<line>ALA CA 3.78 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>ALA CA 191</line>
<line>ALA CA 196</line>
<line>SER CA 147</line>
<line>THR CA 176</line>
<line>ALA CA 180</line>
<line>VAL CA 203</line>
<line>VAL CA 154</line>
<line>ILE CA 148</line>
<line>ALA CA 80</line>
<line>GLY CA 75</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1OYH</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>1OYHL</entryIDChain>
<sequence>EGSEAAASTAVVIA</sequence>
<secondary-structure>EEEEEEEEEEEEE </secondary-structure>
<atom-coordinate>
<line>ATOM 6066 CA GLU L 378 28.147 4.642 32.337 1.00 52.98 C </line>
<line>ATOM 6075 CA GLY L 379 31.817 3.805 32.002 1.00 48.79 C </line>
<line>ATOM 6079 CA SER L 380 34.444 1.349 33.109 1.00 44.23 C </line>
<line>ATOM 6085 CA GLU L 381 36.011 0.153 36.368 1.00 44.21 C </line>
<line>ATOM 6094 CA ALA L 382 39.372 -1.644 36.704 1.00 42.09 C </line>
<line>ATOM 6099 CA ALA L 383 41.500 -2.856 39.603 1.00 38.97 C </line>
<line>ATOM 6104 CA ALA L 384 44.716 -4.828 40.054 1.00 37.11 C </line>
<line>ATOM 6109 CA SER L 385 47.258 -5.889 42.653 1.00 34.42 C </line>
<line>ATOM 6115 CA THR L 386 50.711 -7.502 42.838 1.00 35.13 C </line>
<line>ATOM 6122 CA ALA L 387 52.190 -9.235 45.855 1.00 38.33 C </line>
<line>ATOM 6127 CA VAL L 388 55.790 -10.358 45.890 1.00 40.61 C </line>
<line>ATOM 6134 CA VAL L 389 56.308 -12.977 48.613 1.00 44.47 C </line>
<line>ATOM 6141 CA ILE L 390 59.800 -13.238 50.126 1.00 52.29 C </line>
<line>ATOM 6149 CA ALA L 391 60.810 -16.684 51.440 1.00 62.53 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ILE VAL VAL ALA THR SER ALA ALA ALA GLU SER GLY GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 43.43 40.47 36.99 34.25 30.88 27.69 24.14 20.59 16.95 13.59 9.91 7.15 3.78 </line>
<line>GLY CA 40.48 37.44 34.02 31.12 27.87 24.54 21.11 17.49 14.00 10.43 7.07 3.76 </line>
<line>SER CA 36.83 33.84 30.39 27.50 24.28 20.92 17.54 13.85 10.47 6.79 3.81 </line>
<line>GLU CA 33.55 30.57 27.10 24.34 20.97 17.79 14.23 10.69 7.05 3.83 </line>
<line>ALA CA 30.05 27.05 23.60 20.73 17.48 14.16 10.75 7.07 3.79 </line>
<line>ALA CA 26.54 23.52 20.07 17.32 13.93 10.81 7.19 3.80 </line>
<line>ALA CA 23.00 19.99 16.55 13.68 10.44 7.13 3.79 </line>
<line>SER CA 19.43 16.34 12.95 10.16 6.77 3.82 </line>
<line>THR CA 16.13 12.99 9.73 6.58 3.78 </line>
<line>ALA CA 12.69 9.60 6.21 3.77 </line>
<line>VAL CA 9.80 6.51 3.81 </line>
<line>VAL CA 6.48 3.81 </line>
<line>ILE CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLU CA 327</line>
<line>GLY CA 421</line>
<line>SER CA 471</line>
<line>GLU CA 455</line>
<line>ALA CA 521</line>
<line>ALA CA 519</line>
<line>ALA CA 555</line>
<line>SER CA 563</line>
<line>THR CA 577</line>
<line>ALA CA 593</line>
<line>VAL CA 589</line>
<line>VAL CA 567</line>
<line>ILE CA 539</line>
<line>ALA CA 422</line>
</n14>
</entryChain>
<parallel>
<x>-47.00899887084961</x>
<y>11.576000213623047</y>
<z>-28.82200050354004</z>
</parallel>
<rotation>
<x>0.6330000162124634</x>
<y>-0.7739999890327454</y>
<z>0.028999999165534973</z>
<x>-0.2540000081062317</x>
<y>-0.24199999868869781</y>
<z>-0.9359999895095825</z>
<x>-0.7319999933242798</x>
<y>-0.5849999785423279</y>
<z>0.3499999940395355</z>
</rotation>
<rmsd>7.472814083099365</rmsd>
<dmax>9.827784538269043</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1OYH</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>1OYHL</entryIDChain>
<sequence>PMNPM-CIYRS</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 3336 CA PRO L 16 68.622 11.344 49.980 1.00104.25 C </line>
<line>ATOM 3343 CA MET L 17 67.697 7.642 49.773 1.00100.56 C </line>
<line>ATOM 3351 CA ASN L 18 70.765 5.506 49.165 1.00 97.88 C </line>
<line>ATOM 3359 CA PRO L 19 70.440 1.764 48.459 1.00 93.82 C </line>
<line>ATOM 3366 CA MET L 20 73.028 -0.792 49.487 1.00 86.44 C </line>
<line>ATOM 3374 CA CYS L 21 74.067 -1.464 45.899 1.00 82.72 C </line>
<line>ATOM 3380 CA ILE L 22 74.014 0.436 42.595 1.00 86.12 C </line>
<line>ATOM 3388 CA TYR L 23 74.120 -0.716 38.968 1.00 93.16 C </line>
<line>ATOM 3400 CA ARG L 24 75.243 1.265 35.928 1.00 99.99 C </line>
<line>ATOM 3405 CA SER L 25 74.336 0.507 32.314 1.00105.08 C </line>
</atom-coordinate>
<distance-map>
<line> SER ARG TYR ILE CYS MET PRO ASN MET PRO </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>PRO CA 21.50 18.52 17.23 14.23 14.50 12.92 9.87 6.27 3.82 </line>
<line>MET CA 20.00 17.01 15.10 11.97 11.77 9.98 6.62 3.79 </line>
<line>ASN CA 17.94 14.60 12.41 8.91 8.38 6.70 3.82 </line>
<line>PRO CA 16.66 13.43 10.48 6.99 5.49 3.78 </line>
<line>MET CA 17.27 13.89 10.58 7.07 3.80 </line>
<line>CYS CA 13.73 10.40 6.97 3.81 </line>
<line>ILE CA 10.29 6.83 3.81 </line>
<line>TYR CA 6.77 3.80 </line>
<line>ARG CA 3.80 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>PRO CA 244</line>
<line>MET CA 329</line>
<line>ASN CA 294</line>
<line>PRO CA 351</line>
<line>MET CA 309</line>
<line>CYS CA 298</line>
<line>ILE CA 300</line>
<line>TYR CA 290</line>
<line>ARG CA 233</line>
<line>SER CA 212</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ANT</pdbID>
<pdbChain>I</pdbChain>
<entryIDChain>1ANTI</entryIDChain>
<sequence>IPMNPMCIYRS</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 3161 CA ILE I 15 -53.393 19.918 8.233 1.00 88.81 C </line>
<line>ATOM 3169 CA PRO I 16 -52.377 19.894 4.529 1.00122.18 C </line>
<line>ATOM 3176 CA MET I 17 -55.823 20.628 3.041 1.00142.90 C </line>
<line>ATOM 3184 CA ASN I 18 -57.026 19.453 -0.375 1.00155.95 C </line>
<line>ATOM 3192 CA PRO I 19 -60.066 20.102 -2.670 1.00156.59 C </line>
<line>ATOM 3199 CA MET I 20 -61.838 17.666 -5.080 1.00148.59 C </line>
<line>ATOM 3207 CA CYS I 21 -58.733 16.024 -6.547 1.00 84.47 C </line>
<line>ATOM 3213 CA ILE I 22 -57.915 13.348 -3.934 1.00 55.97 C </line>
<line>ATOM 3221 CA TYR I 23 -57.564 9.917 -5.519 1.00 54.38 C </line>
<line>ATOM 3233 CA ARG I 24 -58.559 6.809 -3.596 1.00 73.52 C </line>
<line>ATOM 3244 CA SER I 25 -55.864 4.138 -3.189 1.00 62.42 C </line>
</atom-coordinate>
<distance-map>
<line> SER ARG TYR ILE CYS MET PRO ASN MET PRO ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 19.64 18.40 17.51 14.55 16.19 15.93 12.78 9.35 5.78 3.84 </line>
<line>PRO CA 17.89 16.60 15.08 12.05 13.34 13.67 10.54 6.77 3.82 </line>
<line>MET CA 17.63 15.57 13.82 10.30 11.03 10.53 7.13 3.81 </line>
<line>ASN CA 15.61 13.14 10.85 7.12 7.26 6.96 3.86 </line>
<line>PRO CA 16.52 13.41 10.87 7.20 5.78 3.86 </line>
<line>MET CA 14.91 11.44 8.86 5.95 3.81 </line>
<line>CYS CA 12.68 9.68 6.30 3.83 </line>
<line>ILE CA 9.46 6.58 3.80 </line>
<line>TYR CA 6.46 3.79 </line>
<line>ARG CA 3.82 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>ILE CA 225</line>
<line>PRO CA 310</line>
<line>MET CA 272</line>
<line>ASN CA 290</line>
<line>PRO CA 222</line>
<line>MET CA 193</line>
<line>CYS CA 284</line>
<line>ILE CA 319</line>
<line>TYR CA 326</line>
<line>ARG CA 284</line>
<line>SER CA 294</line>
</n14>
</entryChain>
<parallel>
<x>128.20599365234375</x>
<y>-14.444999694824219</y>
<z>47.19599914550781</z>
</parallel>
<rotation>
<x>-0.9350000023841858</x>
<y>0.17399999499320984</y>
<z>-0.3089999854564667</z>
<x>-0.3409999907016754</x>
<y>-0.20200000703334808</y>
<z>0.9179999828338623</z>
<x>0.09799999743700027</x>
<y>0.9639999866485596</y>
<z>0.24799999594688416</z>
</rotation>
<rmsd>1.1026489734649658</rmsd>
<dmax>2.106842041015625</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1OYH</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>1OYHL</entryIDChain>
<sequence>RSPEA--TNRRV</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3400 CA ARG L 24 75.243 1.265 35.928 1.00 99.99 C </line>
<line>ATOM 3405 CA SER L 25 74.336 0.507 32.314 1.00105.08 C </line>
<line>ATOM 3411 CA PRO L 26 77.375 0.238 29.964 1.00107.70 C </line>
<line>ATOM 3418 CA GLU L 42 63.829 19.423 30.440 1.00102.66 C </line>
<line>ATOM 3427 CA ALA L 43 65.537 16.525 32.237 1.00100.62 C </line>
<line>ATOM 3432 CA THR L 44 63.210 15.215 34.967 1.00 96.93 C </line>
<line>ATOM 3439 CA ASN L 45 60.159 15.245 32.695 1.00 91.40 C </line>
<line>ATOM 3447 CA ARG L 46 62.221 13.789 29.880 1.00 85.10 C </line>
<line>ATOM 3453 CA ARG L 47 63.372 11.251 32.472 1.00 80.44 C </line>
<line>ATOM 3464 CA VAL L 48 59.864 10.283 33.592 1.00 72.80 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ARG ARG ASN THR ALA GLU PRO SER ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 17.98 15.89 19.05 20.82 18.45 18.46 22.14 6.42 3.80 </line>
<line>SER CA 17.51 15.35 18.14 20.45 18.63 18.28 21.72 3.85 </line>
<line>PRO CA 20.51 17.99 20.33 23.00 21.21 20.26 23.49 </line>
<line>GLU CA 10.45 8.43 5.89 6.00 6.21 3.81 </line>
<line>ALA CA 8.54 5.71 4.90 5.55 3.82 </line>
<line>THR CA 6.12 4.69 5.37 3.80 </line>
<line>ASN CA 5.05 5.13 3.78 </line>
<line>ARG CA 5.62 3.81 </line>
<line>ARG CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ARG CA 233</line>
<line>SER CA 212</line>
<line>PRO CA 125</line>
<line>GLU CA 116</line>
<line>ALA CA 181</line>
<line>THR CA 270</line>
<line>ASN CA 273</line>
<line>ARG CA 234</line>
<line>ARG CA 319</line>
<line>VAL CA 386</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ANT</pdbID>
<pdbChain>I</pdbChain>
<entryIDChain>1ANTI</entryIDChain>
<sequence>RSPEKKATNRRV</sequence>
<secondary-structure> HH</secondary-structure>
<atom-coordinate>
<line>ATOM 3233 CA ARG I 24 -58.559 6.809 -3.596 1.00 73.52 C </line>
<line>ATOM 3244 CA SER I 25 -55.864 4.138 -3.189 1.00 62.42 C </line>
<line>ATOM 3250 CA PRO I 26 -57.186 0.573 -3.539 1.00 67.67 C </line>
<line>ATOM 3257 CA GLU I 27 -57.742 -1.350 -0.311 1.00106.31 C </line>
<line>ATOM 3266 CA LYS I 28 -54.799 -3.732 -0.815 1.00154.71 C </line>
<line>ATOM 3275 CA LYS I 29 -52.007 -2.169 -2.925 1.00167.29 C </line>
<line>ATOM 3284 CA ALA I 43 -42.652 -4.192 12.223 1.00137.55 C </line>
<line>ATOM 3289 CA THR I 44 -45.104 -1.571 13.553 1.00161.01 C </line>
<line>ATOM 3296 CA ASN I 45 -48.093 0.314 12.039 1.00142.79 C </line>
<line>ATOM 3304 CA ARG I 46 -46.560 3.730 11.167 1.00 80.19 C </line>
<line>ATOM 3315 CA ARG I 47 -47.052 6.156 8.252 1.00 59.95 C </line>
<line>ATOM 3326 CA VAL I 48 -43.302 6.744 7.733 1.00 42.53 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ARG ARG ASN THR ALA LYS LYS GLU PRO SER ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 19.00 16.53 19.27 19.90 23.35 24.99 11.13 11.53 8.83 6.39 3.82 </line>
<line>SER CA 16.85 14.58 17.11 17.52 20.70 21.94 7.40 8.29 6.48 3.82 </line>
<line>PRO CA 18.92 16.52 18.42 18.04 21.04 21.96 5.89 5.63 3.80 </line>
<line>GLU CA 18.40 15.62 16.81 15.76 18.76 19.82 6.36 3.82 </line>
<line>LYS CA 17.75 15.49 16.34 15.05 17.47 17.83 3.83 </line>
<line>LYS CA 16.40 14.79 16.22 15.67 17.88 17.92 </line>
<line>ALA CA 11.84 11.93 8.90 7.07 3.83 </line>
<line>THR CA 10.31 9.57 5.99 3.84 </line>
<line>ASN CA 9.10 7.04 3.84 </line>
<line>ARG CA 5.61 3.82 </line>
<line>ARG CA 3.83 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ARG CA 284</line>
<line>SER CA 294</line>
<line>PRO CA 208</line>
<line>GLU CA 165</line>
<line>LYS CA 175</line>
<line>LYS CA 245</line>
<line>ALA CA 159</line>
<line>THR CA 138</line>
<line>ASN CA 168</line>
<line>ARG CA 252</line>
<line>ARG CA 346</line>
<line>VAL CA 380</line>
</n14>
</entryChain>
<parallel>
<x>120.72699737548828</x>
<y>9.161999702453613</y>
<z>29.138999938964844</z>
</parallel>
<rotation>
<x>-0.7310000061988831</x>
<y>-0.04699999839067459</y>
<z>-0.6809999942779541</z>
<x>-0.3370000123977661</x>
<y>-0.8429999947547913</y>
<z>0.41999998688697815</z>
<x>-0.593999981880188</x>
<y>0.5360000133514404</y>
<z>0.6000000238418579</z>
</rotation>
<rmsd>7.514595985412598</rmsd>
<dmax>13.617812156677246</dmax>
</indel>