1APXA-6CCPA | |
confEVID | 1APXA-6CCPA |
pdbIDA | 1APX |
pdbIDB | 6CCP |
pdbChainA | A |
pdbChainB | A |
identity | 0.317499995231628 |
indelSize | 3 |
alignment | <alignment> <seq1>----GKSYPTVSPDYQKAIEKAKRKLRGFIAEKK-------CAPLILRLAWHSAGTFDSKTKTGGPF-GTIKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKP--EPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKD---------------GLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA-----------------</seq1> <seq2>LVHVASVEKGRSYEDFQ---KVYNAIALKLREDDEYDNYIGYGPVLVKLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQ-RLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL</seq2> <ss_1>---- HHHHHHHHHHHHHHHHHHHH ------- HHHHHHHHHHHGGG - GGG HHHH GGG HHHHHHHHHHGGG HHHHHHHHHHHHHHH -- HHHHIIIIIII HHHHHHHGGGGG EEE HHHHHHH --------------- HHHH HHHHHHHHH HHHHHHHHHHHHHHHH -----------------</ss_1> <ss_2> HHHHH---HHHHHHHHHHHH HHHHHHHHHHHH GGG HHHH HHHHHHHHHHH HHHHHHHHHHHHHHH HHHHHHHH - HHHHHHGGGGGG EEE HHHH HHHHHHHH EEEEEEE EEEEEE EEE GGG HHHHHHHHHHHH HHHHHHHHHHHHHHHHH HHHH </ss_2> </alignment> |
indel | <indel> <confEVID></confEVID> <index>0</index> <entryChain> <pdbID>1APX</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1APXA</entryIDChain> <sequence>REDKP--EPPPE</sequence> <secondary-structure> -- </secondary-structure> <atom-coordinate> <line>ATOM 899 CA ARG A 119 29.975 -1.578 21.450 1.00 10.09 C </line> <line>ATOM 910 CA GLU A 120 30.770 1.822 22.846 1.00 15.56 C </line> <line>ATOM 919 CA ASP A 121 29.049 5.090 21.968 1.00 11.52 C </line> <line>ATOM 927 CA LYS A 122 31.384 7.434 20.141 1.00 12.38 C </line> <line>ATOM 936 CA PRO A 123 30.942 11.241 20.498 1.00 16.71 C </line> <line>ATOM 943 CA GLU A 124 31.362 12.434 16.906 1.00 21.80 C </line> <line>ATOM 952 CA PRO A 125 29.340 11.330 13.864 1.00 15.36 C </line> <line>ATOM 959 CA PRO A 126 31.091 10.310 10.635 1.00 13.11 C </line> <line>ATOM 966 CA PRO A 127 31.020 12.667 7.611 1.00 10.62 C </line> <line>ATOM 973 CA GLU A 128 28.239 12.485 5.006 1.00 11.07 C </line> </atom-coordinate> <distance-map> <line> GLU PRO PRO PRO GLU PRO LYS ASP GLU ARG </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ARG CA 21.71 19.89 16.11 14.99 14.80 12.89 9.21 6.75 3.76 </line> <line>GLU CA 20.94 18.70 14.87 13.16 12.18 9.71 6.26 3.80 </line> <line>ASP CA 18.52 16.35 12.64 10.23 9.21 6.60 3.78 </line> <line>LYS CA 16.26 13.58 9.94 7.67 5.96 3.85 </line> <line>PRO CA 15.78 12.97 9.91 6.83 3.81 </line> <line>GLU CA 12.30 9.30 6.63 3.82 </line> <line>PRO CA 9.00 6.61 3.81 </line> <line>PRO CA 6.67 3.83 </line> <line>PRO CA 3.81 </line> <line>GLU CA </line> </distance-map> <n14> <line>ARG CA 397</line> <line>GLU CA 334</line> <line>ASP CA 320</line> <line>LYS CA 280</line> <line>PRO CA 201</line> <line>GLU CA 226</line> <line>PRO CA 306</line> <line>PRO CA 323</line> <line>PRO CA 267</line> <line>GLU CA 263</line> </n14> </entryChain> <entryChain> <pdbID>6CCP</pdbID> <pdbChain>A</pdbChain> <entryIDChain>6CCPA</entryIDChain> <sequence>RVDTPEDTTPDN</sequence> <secondary-structure> </secondary-structure> <atom-coordinate> <line>ATOM 999 CA ARG A 130 15.749 65.314 17.425 1.00 22.15 C </line> <line>ATOM 1010 CA VAL A 131 18.201 65.944 20.278 1.00 27.47 C </line> <line>ATOM 1017 CA ASP A 132 17.907 64.586 23.801 1.00 33.04 C </line> <line>ATOM 1025 CA THR A 133 17.176 67.408 26.258 1.00 36.80 C </line> <line>ATOM 1032 CA PRO A 134 17.596 67.525 30.025 1.00 44.14 C </line> <line>ATOM 1039 CA GLU A 135 15.125 66.169 32.476 1.00 58.27 C </line> <line>ATOM 1048 CA ASP A 136 14.002 69.735 33.228 1.00 61.39 C </line> <line>ATOM 1056 CA THR A 137 12.582 70.270 29.764 1.00 47.96 C </line> <line>ATOM 1063 CA THR A 138 10.166 67.482 30.659 1.00 46.40 C </line> <line>ATOM 1070 CA PRO A 139 6.582 68.689 30.231 1.00 44.63 C </line> <line>ATOM 1077 CA ASP A 140 4.214 68.421 33.190 1.00 46.06 C </line> <line>ATOM 1085 CA ASN A 141 1.498 65.771 33.008 1.00 40.00 C </line> </atom-coordinate> <distance-map> <line> ASN ASP PRO THR THR ASP GLU PRO THR ASP VAL ARG </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>ARG CA 21.12 19.78 16.11 14.53 13.67 16.50 15.09 12.93 9.19 6.77 3.81 </line> <line>VAL CA 21.00 19.20 15.54 13.22 11.84 14.13 12.58 9.89 6.24 3.79 </line> <line>ASP CA 18.85 17.04 13.65 10.74 9.81 11.43 9.25 6.89 3.81 </line> <line>THR CA 17.15 14.73 11.39 8.28 6.45 8.00 6.66 3.79 </line> <line>PRO CA 16.47 13.78 11.08 7.46 5.72 5.30 3.74 </line> <line>GLU CA 13.64 11.16 9.19 5.44 5.54 3.81 </line> <line>ASP CA 13.12 9.88 8.07 5.14 3.78 </line> <line>THR CA 12.39 9.23 6.22 3.80 </line> <line>THR CA 9.14 6.54 3.81 </line> <line>PRO CA 6.49 3.80 </line> <line>ASP CA 3.80 </line> <line>ASN CA </line> </distance-map> <n14> <line>ARG CA 457</line> <line>VAL CA 384</line> <line>ASP CA 340</line> <line>THR CA 297</line> <line>PRO CA 210</line> <line>GLU CA 222</line> <line>ASP CA 197</line> <line>THR CA 287</line> <line>THR CA 339</line> <line>PRO CA 356</line> <line>ASP CA 280</line> <line>ASN CA 281</line> </n14> </entryChain> <parallel> <x>15.994000434875488</x> <y>-59.891998291015625</y> <z>-7.517000198364258</z> </parallel> <rotation> <x>0.0860000029206276</x> <y>0.11599999666213989</y> <z>0.9900000095367432</z> <x>0.9769999980926514</x> <y>0.18400000035762787</y> <z>-0.10599999874830246</z> <x>-0.1940000057220459</x> <y>0.9760000109672546</y> <z>-0.09700000286102295</z> </rotation> <rmsd>1.0075589418411255</rmsd> <dmax>2.0043880939483643</dmax> </indel> <indel> <confEVID></confEVID> <index>1</index> <entryChain> <pdbID>6CCP</pdbID> <pdbChain>A</pdbChain> <entryIDChain>6CCPA</entryIDChain> <sequence>YEDFQ---KVYNA</sequence> <secondary-structure>HHHHH---HHHHH</secondary-structure> <atom-coordinate> <line>ATOM 90 CA TYR A 16 19.954 57.355 5.290 1.00 31.74 C </line> <line>ATOM 102 CA GLU A 17 21.450 53.870 5.271 1.00 32.11 C </line> <line>ATOM 111 CA ASP A 18 22.116 54.126 9.024 1.00 24.89 C </line> <line>ATOM 119 CA PHE A 19 18.457 54.942 9.780 1.00 22.32 C </line> <line>ATOM 130 CA GLN A 20 17.216 52.276 7.404 1.00 22.01 C </line> <line>ATOM 139 CA LYS A 21 19.087 49.787 9.581 1.00 25.95 C </line> <line>ATOM 148 CA VAL A 22 17.308 50.984 12.742 1.00 18.44 C </line> <line>ATOM 155 CA TYR A 23 13.973 50.733 10.865 1.00 17.82 C </line> <line>ATOM 167 CA ASN A 24 14.800 47.149 9.803 1.00 19.25 C </line> <line>ATOM 175 CA ALA A 25 15.737 46.173 13.398 1.00 18.55 C </line> </atom-coordinate> <distance-map> <line> ALA ASN TYR VAL LYS GLN PHE ASP GLU TYR </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>TYR CA 14.44 12.29 10.52 10.15 8.74 6.15 5.31 5.39 3.79 </line> <line>GLU CA 12.57 10.48 9.85 9.02 6.39 5.00 5.52 3.82 </line> <line>ASP CA 11.09 10.14 9.01 6.84 5.32 5.48 3.82 </line> <line>PHE CA 9.87 8.61 6.24 5.08 5.20 3.78 </line> <line>GLN CA 8.68 6.15 4.99 5.49 3.80 </line> <line>LYS CA 6.23 5.04 5.36 3.82 </line> <line>VAL CA 5.10 5.44 3.84 </line> <line>TYR CA 5.51 3.83 </line> <line>ASN CA 3.84 </line> <line>ALA CA </line> </distance-map> <n14> <line>TYR CA 301</line> <line>GLU CA 274</line> <line>ASP CA 316</line> <line>PHE CA 431</line> <line>GLN CA 405</line> <line>LYS CA 374</line> <line>VAL CA 446</line> <line>TYR CA 515</line> <line>ASN CA 400</line> <line>ALA CA 395</line> </n14> </entryChain> <entryChain> <pdbID>1APX</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1APXA</entryIDChain> <sequence>PDYQKAIEKAKRK</sequence> <secondary-structure>HHHHHHHHHHHHH</secondary-structure> <atom-coordinate> <line>ATOM 60 CA PRO A 10 26.193 -9.863 34.407 1.00 10.06 C </line> <line>ATOM 67 CA ASP A 11 23.987 -6.792 34.700 1.00 9.81 C </line> <line>ATOM 75 CA TYR A 12 24.796 -5.634 31.171 1.00 9.83 C </line> <line>ATOM 87 CA GLN A 13 23.999 -9.125 29.875 1.00 7.90 C </line> <line>ATOM 96 CA LYS A 14 20.663 -9.231 31.708 1.00 10.51 C </line> <line>ATOM 105 CA ALA A 15 19.905 -5.726 30.407 1.00 8.74 C </line> <line>ATOM 110 CA ILE A 16 20.395 -7.007 26.845 1.00 7.94 C </line> <line>ATOM 118 CA GLU A 17 18.200 -10.067 27.393 1.00 5.21 C </line> <line>ATOM 127 CA LYS A 18 15.426 -7.876 28.787 1.00 9.99 C </line> <line>ATOM 136 CA ALA A 19 15.681 -5.197 26.041 1.00 7.07 C </line> <line>ATOM 141 CA LYS A 20 15.441 -7.873 23.358 1.00 2.69 C </line> <line>ATOM 150 CA ARG A 21 12.106 -9.096 24.741 1.00 7.56 C </line> <line>ATOM 161 CA LYS A 22 10.794 -5.527 25.107 1.00 4.60 C </line> </atom-coordinate> <distance-map> <line> LYS ARG LYS ALA LYS GLU ILE ALA LYS GLN TYR ASP PRO </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>PRO CA 18.50 17.10 15.54 14.22 12.31 10.64 9.95 8.52 6.19 5.09 5.51 3.79 </line> <line>ASP CA 16.36 15.67 14.24 12.10 10.46 9.88 8.64 6.02 5.09 5.36 3.80 </line> <line>TYR CA 15.26 14.64 12.39 10.47 9.93 8.80 6.32 4.95 5.51 3.81 </line> <line>GLN CA 14.49 12.95 10.83 9.97 8.73 6.38 5.16 5.35 3.81 </line> <line>LYS CA 12.44 11.04 9.94 8.56 6.15 5.04 5.35 3.81 </line> <line>ALA CA 10.54 10.21 8.62 6.10 5.23 5.55 3.82 </line> <line>ILE CA 9.87 8.80 6.12 5.11 5.41 3.81 </line> <line>GLU CA 8.98 6.72 5.36 5.65 3.80 </line> <line>LYS CA 6.37 5.37 5.43 3.84 </line> <line>ALA CA 4.99 5.45 3.80 </line> <line>LYS CA 5.49 3.81 </line> <line>ARG CA 3.82 </line> <line>LYS CA </line> </distance-map> <n14> <line>PRO CA 144</line> <line>ASP CA 170</line> <line>TYR CA 261</line> <line>GLN CA 253</line> <line>LYS CA 224</line> <line>ALA CA 285</line> <line>ILE CA 362</line> <line>GLU CA 302</line> <line>LYS CA 280</line> <line>ALA CA 371</line> <line>LYS CA 382</line> <line>ARG CA 277</line> <line>LYS CA 308</line> </n14> </entryChain> <parallel> <x>-2.078000068664551</x> <y>60.70800018310547</y> <z>-21.26099967956543</z> </parallel> <rotation> <x>0.328000009059906</x> <y>0.9449999928474426</y> <z>-0.014999999664723873</z> <x>0.7770000100135803</x> <y>-0.26100000739097595</y> <z>0.5730000138282776</z> <x>0.5370000004768372</x> <y>-0.19900000095367432</y> <z>-0.8190000057220459</z> </rotation> <rmsd>2.5322389602661133</rmsd> <dmax>3.6602940559387207</dmax> </indel> <indel> <confEVID></confEVID> <index>2</index> <entryChain> <pdbID>6CCP</pdbID> <pdbChain>A</pdbChain> <entryIDChain>6CCPA</entryIDChain> <sequence>RTFFQ-RLNMN</sequence> <secondary-structure>HHHH - </secondary-structure> <atom-coordinate> <line>ATOM 1189 CA ARG A 155 -11.352 70.714 18.185 1.00 25.25 C </line> <line>ATOM 1200 CA THR A 156 -10.078 72.963 20.954 1.00 26.35 C </line> <line>ATOM 1207 CA PHE A 157 -7.518 70.426 22.074 1.00 23.74 C </line> <line>ATOM 1218 CA PHE A 158 -6.075 69.792 18.616 1.00 23.34 C </line> <line>ATOM 1229 CA GLN A 159 -5.823 73.462 18.033 1.00 26.31 C </line> <line>ATOM 1238 CA ARG A 160 -3.015 73.531 20.623 1.00 23.44 C </line> <line>ATOM 1249 CA LEU A 161 -1.063 71.260 18.271 1.00 24.03 C </line> <line>ATOM 1257 CA ASN A 162 -1.998 73.282 15.244 1.00 27.20 C </line> <line>ATOM 1265 CA MET A 163 -4.204 70.609 13.703 1.00 21.89 C </line> <line>ATOM 1273 CA ASN A 164 -7.324 71.547 11.669 1.00 21.10 C </line> </atom-coordinate> <distance-map> <line> ASN MET ASN LEU ARG GLN PHE PHE THR ARG </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ARG CA 7.71 8.44 10.14 10.30 9.13 6.18 5.37 5.47 3.79 </line> <line>THR CA 9.79 9.62 9.90 9.56 7.09 5.19 5.62 3.77 </line> <line>PHE CA 10.47 9.00 9.23 7.54 5.66 5.33 3.80 </line> <line>PHE CA 7.27 5.32 6.34 5.23 5.23 3.72 </line> <line>GLN CA 6.81 5.43 4.74 5.25 3.82 </line> <line>ARG CA 10.13 7.61 5.48 3.81 </line> <line>LEU CA 9.10 5.58 3.76 </line> <line>ASN CA 6.65 3.79 </line> <line>MET CA 3.84 </line> <line>ASN CA </line> </distance-map> <n14> <line>ARG CA 334</line> <line>THR CA 281</line> <line>PHE CA 351</line> <line>PHE CA 397</line> <line>GLN CA 301</line> <line>ARG CA 320</line> <line>LEU CA 384</line> <line>ASN CA 323</line> <line>MET CA 368</line> <line>ASN CA 315</line> </n14> </entryChain> <entryChain> <pdbID>1APX</pdbID> <pdbChain>A</pdbChain> <entryIDChain>1APXA</entryIDChain> <sequence>RDVFGKAMGLS</sequence> <secondary-structure>IIIIIII </secondary-structure> <atom-coordinate> <line>ATOM 1077 CA ARG A 142 31.674 -2.552 -4.696 1.00 9.93 C </line> <line>ATOM 1088 CA ASP A 143 33.225 0.750 -3.626 1.00 12.62 C </line> <line>ATOM 1096 CA VAL A 144 30.832 1.232 -0.705 1.00 8.90 C </line> <line>ATOM 1103 CA PHE A 145 30.285 -2.330 0.551 1.00 4.68 C </line> <line>ATOM 1114 CA GLY A 146 33.603 -3.690 -0.715 1.00 3.72 C </line> <line>ATOM 1118 CA LYS A 147 36.292 -1.013 -0.531 1.00 13.66 C </line> <line>ATOM 1127 CA ALA A 148 34.950 1.005 2.420 1.00 7.96 C </line> <line>ATOM 1132 CA MET A 149 33.089 -1.587 4.511 1.00 5.37 C </line> <line>ATOM 1140 CA GLY A 150 35.152 -4.644 3.603 1.00 2.00 C </line> <line>ATOM 1144 CA LEU A 151 32.194 -6.892 2.751 1.00 6.11 C </line> <line>ATOM 1152 CA SER A 152 32.081 -9.569 0.037 1.00 7.28 C </line> </atom-coordinate> <distance-map> <line> SER LEU GLY MET ALA LYS GLY PHE VAL ASP ARG </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>ARG CA 8.47 8.64 9.24 9.36 8.60 6.41 4.57 5.43 5.56 3.80 </line> <line>ASP CA 11.01 10.01 9.22 8.47 6.29 4.70 5.32 5.96 3.81 </line> <line>VAL CA 10.90 8.93 8.47 6.34 5.17 5.91 5.65 3.82 </line> <line>PHE CA 7.48 5.41 6.19 4.91 6.03 6.24 3.80 </line> <line>GLY CA 6.12 4.92 4.69 5.66 5.80 3.80 </line> <line>LYS CA 9.55 7.88 5.62 6.00 3.82 </line> <line>ALA CA 11.21 8.37 5.78 3.81 </line> <line>MET CA 9.21 5.66 3.80 </line> <line>GLY CA 6.81 3.81 </line> <line>LEU CA 3.81 </line> <line>SER CA </line> </distance-map> <n14> <line>ARG CA 315</line> <line>ASP CA 275</line> <line>VAL CA 362</line> <line>PHE CA 404</line> <line>GLY CA 311</line> <line>LYS CA 256</line> <line>ALA CA 309</line> <line>MET CA 378</line> <line>GLY CA 330</line> <line>LEU CA 358</line> <line>SER CA 298</line> </n14> </entryChain> <parallel> <x>-38.715999603271484</x> <y>73.40599822998047</y> <z>18.832000732421875</z> </parallel> <rotation> <x>0.164000004529953</x> <y>0.9829999804496765</y> <z>-0.0860000029206276</z> <x>0.03999999910593033</x> <y>0.07999999821186066</y> <z>0.9959999918937683</z> <x>0.9860000014305115</x> <y>-0.16699999570846558</y> <z>-0.026000000536441803</z> </rotation> <rmsd>0.8871319890022278</rmsd> <dmax>1.756775975227356</dmax> </indel> |