NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1APYC-9GAAC
confEVID 1APYC-9GAAC
pdbIDA 1APY
pdbIDB 9GAA
pdbChainA C
pdbChainB C
identity 0.202900007367134
indelSize 1
alignment <alignment>
<seq1>-SPLPLVVNTWPFKNATEAAWRALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAM-IMDGTTMDVGAVGDLRRIKNAIGVARKVLEHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHS------------------------------------------------------------------------DWLARNCQPN-YWRNVIPDPSKYC-----------------------------------------GPYKPP----</seq1>
<seq2>TNKPIVLSTWNFGLHANVEAWKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIM-DEN-YNIGSVACMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQGFKKENLLTAESEKEWKEWLDAIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCIQDGFNFAVHDQKGNRLETPGFAL</seq2>
<ss_1>- HHHHHHHHHHHH HHHHHHHHHHHHHH GGG EEEEEE-EEE EEEEEEEEEE HHHHHHHHHHH EEHHHHHHHHHH HHHHHHHH------------------------------------------------------------------------HHHH - HHHH ----------------------------------------- ----</ss_1>
<ss_2> EEEEEEGGHHHHHHHHHHHH HHHHHHHHHHHHHH EEEEEEEE-E - EEEEEEEEEE HHHHHHHHH EE HHHHHHHH HHHHHHHHHH EEEEEEE EEEEEEEE EEEEE EEEEEEEEEHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHHH GGG EEEEEEEEEEEEEEEEE EEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1APY</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1APYC</entryIDChain>
<sequence>NCQPN-YWRNV</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 3267 CA ASN C 139 34.450 40.497 -18.636 1.00 27.03 C </line>
<line>ATOM 3275 CA CYS C 140 32.113 41.924 -16.006 1.00 24.44 C </line>
<line>ATOM 3281 CA GLN C 141 34.430 41.901 -12.982 1.00 19.76 C </line>
<line>ATOM 3290 CA PRO C 142 33.368 42.312 -10.234 1.00 24.29 C </line>
<line>ATOM 3297 CA ASN C 143 29.821 41.014 -9.946 1.00 24.80 C </line>
<line>ATOM 3305 CA TYR C 144 27.654 39.368 -7.282 1.00 21.19 C </line>
<line>ATOM 3317 CA TRP C 145 26.552 36.164 -8.961 1.00 20.30 C </line>
<line>ATOM 3331 CA ARG C 146 27.376 32.677 -7.782 1.00 19.92 C </line>
<line>ATOM 3342 CA ASN C 147 26.467 29.032 -8.520 1.00 23.91 C </line>
<line>ATOM 3350 CA VAL C 148 25.763 29.735 -12.210 1.00 23.21 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ASN ARG TRP TYR ASN PRO GLN CYS ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 15.25 17.25 15.13 13.22 13.28 9.86 8.66 5.83 3.80 </line>
<line>CYS CA 14.26 15.94 13.25 10.66 10.13 6.54 5.92 3.81 </line>
<line>GLN CA 14.96 15.78 12.72 10.54 9.21 5.59 2.97 </line>
<line>PRO CA 14.83 15.06 11.61 9.27 7.07 3.79 </line>
<line>ASN CA 12.20 12.52 8.95 5.93 3.81 </line>
<line>TYR CA 10.98 10.48 6.72 3.78 </line>
<line>TRP CA 7.25 7.15 3.77 </line>
<line>ARG CA 5.56 3.83 </line>
<line>ASN CA 3.82 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ASN CA 223</line>
<line>CYS CA 270</line>
<line>GLN CA 243</line>
<line>PRO CA 235</line>
<line>ASN CA 271</line>
<line>TYR CA 210</line>
<line>TRP CA 214</line>
<line>ARG CA 190</line>
<line>ASN CA 159</line>
<line>VAL CA 175</line>
</n14>
</entryChain>
<entryChain>
<pdbID>9GAA</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>9GAAC</entryIDChain>
<sequence>GRTPQQACKEA</sequence>
<secondary-structure> HHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3691 CA GLY C 525 24.103 6.568 36.256 1.00 7.72 C </line>
<line>ATOM 3695 CA ARG C 526 21.394 7.531 33.678 1.00 6.79 C </line>
<line>ATOM 3706 CA THR C 527 22.362 7.288 30.013 1.00 5.95 C </line>
<line>ATOM 3713 CA PRO C 528 22.297 10.742 28.318 1.00 7.80 C </line>
<line>ATOM 3720 CA GLN C 529 19.045 9.690 26.726 1.00 10.56 C </line>
<line>ATOM 3729 CA GLN C 530 17.480 8.354 29.989 1.00 9.86 C </line>
<line>ATOM 3738 CA ALA C 531 18.612 11.551 31.813 1.00 8.76 C </line>
<line>ATOM 3743 CA CYS C 532 17.016 13.837 29.179 1.00 8.97 C </line>
<line>ATOM 3749 CA LYS C 533 13.765 11.783 29.251 1.00 10.33 C </line>
<line>ATOM 3758 CA GLU C 534 13.462 11.712 33.092 1.00 13.37 C </line>
<line>ATOM 3767 CA ALA C 535 14.205 15.453 33.209 1.00 13.09 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU LYS CYS ALA GLN GLN PRO THR ARG GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 13.65 12.24 13.53 12.38 8.64 9.29 11.23 9.15 6.52 3.86 </line>
<line>ARG CA 10.71 8.99 9.79 8.90 5.23 5.44 7.65 6.31 3.80 </line>
<line>THR CA 11.98 10.40 9.73 8.49 5.96 5.00 5.25 3.85 </line>
<line>PRO CA 10.56 10.09 8.65 6.18 5.14 5.63 3.77 </line>
<line>GLN CA 9.93 8.71 6.22 5.23 5.43 3.86 </line>
<line>GLN CA 8.46 6.09 5.11 5.56 3.85 </line>
<line>ALA CA 6.05 5.31 5.49 3.84 </line>
<line>CYS CA 5.17 5.70 3.85 </line>
<line>LYS CA 5.42 3.85 </line>
<line>GLU CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLY CA 221</line>
<line>ARG CA 276</line>
<line>THR CA 299</line>
<line>PRO CA 428</line>
<line>GLN CA 385</line>
<line>GLN CA 320</line>
<line>ALA CA 389</line>
<line>CYS CA 472</line>
<line>LYS CA 388</line>
<line>GLU CA 331</line>
<line>ALA CA 435</line>
</n14>
</entryChain>
<parallel>
<x>10.895999908447266</x>
<y>29.607999801635742</y>
<z>-42.132999420166016</z>
</parallel>
<rotation>
<x>0.20000000298023224</x>
<y>0.9430000185966492</y>
<z>-0.26600000262260437</z>
<x>-0.9390000104904175</x>
<y>0.2619999945163727</y>
<z>0.22200000286102295</z>
<x>-0.27900001406669617</x>
<y>-0.20499999821186066</y>
<z>-0.9380000233650208</z>
</rotation>
<rmsd>2.696331024169922</rmsd>
<dmax>4.753856182098389</dmax>
</indel>