NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AQFB-3G2GD
confEVID 1AQFB-3G2GD
pdbIDA 1AQF
pdbIDB 3G2G
pdbChainA B
pdbChainB D
identity 0.913100004196167
indelSize 1
alignment <alignment>
<seq1>IQTQQLHAAMADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARSSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq1>
<seq2>-QTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLI------EVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV-----DFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRYAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq2>
<ss_1> GGG HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHGGGG EEEEE EEEEEE GGG EE EEE HHHH EEEEEE EEEEEEE EEEEEEE EEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHHH HHHHHHHHHHHGGG HHHHHHHHHHHHHHH EEE HHHHHHHH EEEEE HHHHHGGGG EE HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_1>
<ss_2>- HHHH HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHHGGG EEEEE ------ EEE EEEEEE GGG EEE EEEEEE EEEEE----- EEEEEEEEEEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHH EEE HHHHHHGGG EEEEE HHHHHGGGG EEE HHHHHHHHHHHHHHHHHH EEEEEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3G2G</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>3G2GD</entryIDChain>
<sequence>ISLQV-----DFLVT</sequence>
<secondary-structure>EEEEE----- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 12056 CA ILE D 181 -43.734 16.846 40.002 1.00 47.65 C </line>
<line>ATOM 12064 CA SER D 182 -44.281 17.356 36.271 1.00 52.03 C </line>
<line>ATOM 12070 CA LEU D 183 -46.886 19.374 34.375 1.00 58.45 C </line>
<line>ATOM 12078 CA GLN D 184 -47.928 19.697 30.740 1.00 63.30 C </line>
<line>ATOM 12083 CA VAL D 185 -49.177 22.899 29.105 1.00 65.11 C </line>
<line>ATOM 12088 CA ASP D 191 -51.224 35.843 30.700 1.00 71.97 C </line>
<line>ATOM 12093 CA PHE D 192 -51.955 32.597 32.536 1.00 74.58 C </line>
<line>ATOM 12104 CA LEU D 193 -51.460 28.863 32.022 1.00 69.97 C </line>
<line>ATOM 12112 CA VAL D 194 -53.827 25.931 32.401 1.00 66.11 C </line>
<line>ATOM 12119 CA THR D 195 -52.048 22.595 32.792 1.00 67.29 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.42 15.56 16.36 19.27 22.44 13.60 10.56 6.93 3.81 </line>
<line>SER CA 9.99 13.40 14.21 17.47 20.52 10.30 7.03 3.80 </line>
<line>LEU CA 6.29 9.75 10.79 14.28 17.42 6.74 3.80 </line>
<line>GLN CA 5.44 8.74 9.91 13.63 16.48 3.81 </line>
<line>VAL CA 4.68 6.46 7.02 10.66 13.20 </line>
<line>ASP CA 13.44 10.39 7.11 3.80 </line>
<line>PHE CA 10.01 6.93 3.80 </line>
<line>LEU CA 6.34 3.79 </line>
<line>VAL CA 3.80 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 311</line>
<line>SER CA 321</line>
<line>LEU CA 335</line>
<line>GLN CA 260</line>
<line>VAL CA 255</line>
<line>ASP CA 178</line>
<line>PHE CA 239</line>
<line>LEU CA 272</line>
<line>VAL CA 238</line>
<line>THR CA 278</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AQF</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1AQFB</entryIDChain>
<sequence>ISLQVKQKGPDFLVT</sequence>
<secondary-structure>EEEEEEE EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 5272 CA ILE B 180 22.865 24.059 1.430 1.00 19.17 C </line>
<line>ATOM 5280 CA SER B 181 23.950 20.555 1.989 1.00 12.60 C </line>
<line>ATOM 5286 CA LEU B 182 26.950 18.914 0.421 1.00 23.71 C </line>
<line>ATOM 5294 CA GLN B 183 28.041 15.361 0.501 1.00 40.05 C </line>
<line>ATOM 5303 CA VAL B 184 31.638 14.425 0.818 1.00 37.35 C </line>
<line>ATOM 5310 CA LYS B 185 32.308 12.616 -2.451 1.00 62.86 C </line>
<line>ATOM 5319 CA GLN B 186 35.968 12.506 -2.151 1.00 31.94 C </line>
<line>ATOM 5328 CA LYS B 187 38.267 13.218 0.612 1.00 85.66 C </line>
<line>ATOM 5337 CA GLY B 188 41.661 14.892 0.244 1.00 49.19 C </line>
<line>ATOM 5341 CA PRO B 189 44.666 15.920 2.288 1.00100.00 C </line>
<line>ATOM 5348 CA ASP B 190 43.886 19.775 2.443 1.00 59.07 C </line>
<line>ATOM 5356 CA PHE B 191 40.592 19.885 0.464 1.00 31.35 C </line>
<line>ATOM 5367 CA LEU B 192 37.315 18.033 0.242 1.00 7.23 C </line>
<line>ATOM 5375 CA VAL B 193 35.413 17.248 -2.841 1.00 39.48 C </line>
<line>ATOM 5382 CA THR B 194 31.756 17.571 -2.232 1.00 33.02 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP PRO GLY LYS GLN LYS VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 11.60 14.90 15.70 18.24 21.48 23.29 20.95 18.85 17.83 15.34 13.04 10.16 6.65 3.71 </line>
<line>SER CA 9.36 12.87 13.71 16.73 19.96 21.23 18.68 16.15 15.05 12.35 9.90 6.78 3.76 </line>
<line>LEU CA 5.65 9.22 10.40 13.68 17.08 18.06 15.25 12.67 11.36 8.75 6.50 3.72 </line>
<line>GLN CA 5.11 8.31 9.65 13.34 16.56 16.73 13.63 10.45 8.83 5.87 3.73 </line>
<line>VAL CA 4.38 5.97 6.75 10.49 13.46 13.20 10.05 6.74 5.59 3.80 </line>
<line>LYS CA 4.99 5.59 7.85 11.40 14.47 13.64 10.00 6.73 3.67 </line>
<line>GLN CA 6.59 4.82 6.17 9.09 11.69 10.34 6.62 3.66 </line>
<line>LYS CA 8.33 6.03 4.92 7.06 8.83 7.15 3.80 </line>
<line>GLY CA 10.56 7.36 5.36 5.11 5.80 3.78 </line>
<line>PRO CA 13.78 10.66 7.92 5.97 3.94 </line>
<line>ASP CA 13.19 10.30 7.15 3.84 </line>
<line>PHE CA 9.52 6.69 3.77 </line>
<line>LEU CA 6.10 3.71 </line>
<line>VAL CA 3.72 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 361</line>
<line>SER CA 372</line>
<line>LEU CA 394</line>
<line>GLN CA 329</line>
<line>VAL CA 327</line>
<line>LYS CA 235</line>
<line>GLN CA 238</line>
<line>LYS CA 245</line>
<line>GLY CA 228</line>
<line>PRO CA 198</line>
<line>ASP CA 262</line>
<line>PHE CA 338</line>
<line>LEU CA 365</line>
<line>VAL CA 315</line>
<line>THR CA 373</line>
</n14>
</entryChain>
<parallel>
<x>-80.23500061035156</x>
<y>5.309000015258789</y>
<z>32.18000030517578</z>
</parallel>
<rotation>
<x>-0.3569999933242798</x>
<y>0.9129999876022339</y>
<z>-0.19900000095367432</z>
<x>0.1679999977350235</x>
<y>0.2720000147819519</y>
<z>0.9470000267028809</z>
<x>0.9190000295639038</x>
<y>0.3050000071525574</y>
<z>-0.25</z>
</rotation>
<rmsd>0.45812100172042847</rmsd>
<dmax>0.6571679711341858</dmax>
</indel>