NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AQFB-3GQYB
confEVID 1AQFB-3GQYB
pdbIDA 1AQF
pdbIDB 3GQY
pdbChainA B
pdbChainB B
identity 0.909300029277802
indelSize 1
alignment <alignment>
<seq1>IQTQQLHAAMADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARSSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq1>
<seq2>-QTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIK-----EVE----ATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV-----DFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq2>
<ss_1> GGG HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHGGGG EEEEE EEEEEE GGG EE EEE HHHH EEEEEE EEEEEEE EEEEEEE EEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHHH HHHHHHHHHHHGGG HHHHHHHHHHHHHHH EEE HHHHHHHH EEEEE HHHHHGGGG EE HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_1>
<ss_2>- HHHH HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHHGGG EEEEE ----- ---- EEEE GGG EEE HHHH EEEEEE EEEEE----- EEEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHH EEE HHHHHHGGG EEEEE HHHHHGGGG EEE HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3GQY</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>3GQYB</entryIDChain>
<sequence>ISLQV-----DFLVT</sequence>
<secondary-structure>EEEEE----- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 4966 CA ILE B 181 5.517 10.301 -23.575 1.00 54.78 C </line>
<line>ATOM 4974 CA SER B 182 6.049 6.515 -23.344 1.00 55.95 C </line>
<line>ATOM 4980 CA LEU B 183 7.126 3.986 -26.021 1.00 57.70 C </line>
<line>ATOM 4988 CA GLN B 184 7.692 0.206 -26.178 1.00 60.29 C </line>
<line>ATOM 4993 CA VAL B 185 10.467 -1.161 -28.436 1.00 61.49 C </line>
<line>ATOM 4998 CA ASP B 191 21.361 1.344 -35.842 1.00 62.07 C </line>
<line>ATOM 5003 CA PHE B 192 17.541 1.718 -35.685 1.00 63.08 C </line>
<line>ATOM 5008 CA LEU B 193 14.600 0.975 -33.337 1.00 64.38 C </line>
<line>ATOM 5016 CA VAL B 194 10.920 0.302 -34.166 1.00 65.66 C </line>
<line>ATOM 5021 CA THR B 195 8.607 1.243 -31.275 1.00 67.13 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.28 15.54 16.27 19.10 21.95 13.40 10.65 6.96 3.83 </line>
<line>SER CA 9.86 13.40 14.27 17.53 20.43 10.22 7.11 3.84 </line>
<line>LEU CA 6.11 9.71 10.88 14.39 17.49 6.59 3.83 </line>
<line>GLN CA 5.28 8.62 9.98 13.77 16.78 3.83 </line>
<line>VAL CA 4.16 5.93 6.76 10.53 13.41 </line>
<line>ASP CA 13.55 10.63 7.22 3.84 </line>
<line>PHE CA 9.97 6.94 3.84 </line>
<line>LEU CA 6.34 3.83 </line>
<line>VAL CA 3.82 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 297</line>
<line>SER CA 301</line>
<line>LEU CA 314</line>
<line>GLN CA 239</line>
<line>VAL CA 253</line>
<line>ASP CA 186</line>
<line>PHE CA 233</line>
<line>LEU CA 268</line>
<line>VAL CA 218</line>
<line>THR CA 254</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AQF</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1AQFB</entryIDChain>
<sequence>ISLQVKQKGPDFLVT</sequence>
<secondary-structure>EEEEEEE EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 5272 CA ILE B 180 22.865 24.059 1.430 1.00 19.17 C </line>
<line>ATOM 5280 CA SER B 181 23.950 20.555 1.989 1.00 12.60 C </line>
<line>ATOM 5286 CA LEU B 182 26.950 18.914 0.421 1.00 23.71 C </line>
<line>ATOM 5294 CA GLN B 183 28.041 15.361 0.501 1.00 40.05 C </line>
<line>ATOM 5303 CA VAL B 184 31.638 14.425 0.818 1.00 37.35 C </line>
<line>ATOM 5310 CA LYS B 185 32.308 12.616 -2.451 1.00 62.86 C </line>
<line>ATOM 5319 CA GLN B 186 35.968 12.506 -2.151 1.00 31.94 C </line>
<line>ATOM 5328 CA LYS B 187 38.267 13.218 0.612 1.00 85.66 C </line>
<line>ATOM 5337 CA GLY B 188 41.661 14.892 0.244 1.00 49.19 C </line>
<line>ATOM 5341 CA PRO B 189 44.666 15.920 2.288 1.00100.00 C </line>
<line>ATOM 5348 CA ASP B 190 43.886 19.775 2.443 1.00 59.07 C </line>
<line>ATOM 5356 CA PHE B 191 40.592 19.885 0.464 1.00 31.35 C </line>
<line>ATOM 5367 CA LEU B 192 37.315 18.033 0.242 1.00 7.23 C </line>
<line>ATOM 5375 CA VAL B 193 35.413 17.248 -2.841 1.00 39.48 C </line>
<line>ATOM 5382 CA THR B 194 31.756 17.571 -2.232 1.00 33.02 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP PRO GLY LYS GLN LYS VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 11.60 14.90 15.70 18.24 21.48 23.29 20.95 18.85 17.83 15.34 13.04 10.16 6.65 3.71 </line>
<line>SER CA 9.36 12.87 13.71 16.73 19.96 21.23 18.68 16.15 15.05 12.35 9.90 6.78 3.76 </line>
<line>LEU CA 5.65 9.22 10.40 13.68 17.08 18.06 15.25 12.67 11.36 8.75 6.50 3.72 </line>
<line>GLN CA 5.11 8.31 9.65 13.34 16.56 16.73 13.63 10.45 8.83 5.87 3.73 </line>
<line>VAL CA 4.38 5.97 6.75 10.49 13.46 13.20 10.05 6.74 5.59 3.80 </line>
<line>LYS CA 4.99 5.59 7.85 11.40 14.47 13.64 10.00 6.73 3.67 </line>
<line>GLN CA 6.59 4.82 6.17 9.09 11.69 10.34 6.62 3.66 </line>
<line>LYS CA 8.33 6.03 4.92 7.06 8.83 7.15 3.80 </line>
<line>GLY CA 10.56 7.36 5.36 5.11 5.80 3.78 </line>
<line>PRO CA 13.78 10.66 7.92 5.97 3.94 </line>
<line>ASP CA 13.19 10.30 7.15 3.84 </line>
<line>PHE CA 9.52 6.69 3.77 </line>
<line>LEU CA 6.10 3.71 </line>
<line>VAL CA 3.72 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 361</line>
<line>SER CA 372</line>
<line>LEU CA 394</line>
<line>GLN CA 329</line>
<line>VAL CA 327</line>
<line>LYS CA 235</line>
<line>GLN CA 238</line>
<line>LYS CA 245</line>
<line>GLY CA 228</line>
<line>PRO CA 198</line>
<line>ASP CA 262</line>
<line>PHE CA 338</line>
<line>LEU CA 365</line>
<line>VAL CA 315</line>
<line>THR CA 373</line>
</n14>
</entryChain>
<parallel>
<x>-20.611000061035156</x>
<y>-15.890000343322754</y>
<z>-30.090999603271484</z>
</parallel>
<rotation>
<x>0.7289999723434448</x>
<y>-0.21699999272823334</y>
<z>-0.6499999761581421</z>
<x>0.13199999928474426</x>
<y>0.9750000238418579</y>
<z>-0.1770000010728836</z>
<x>0.671999990940094</x>
<y>0.04399999976158142</y>
<z>0.7390000224113464</z>
</rotation>
<rmsd>0.3529309928417206</rmsd>
<dmax>0.5440130233764648</dmax>
</indel>