NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AQFC-3GQYB
confEVID 1AQFC-3GQYB
pdbIDA 1AQF
pdbIDB 3GQY
pdbChainA C
pdbChainB B
identity 0.909300029277802
indelSize 1
alignment <alignment>
<seq1>IQTQQLHAAMADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARSSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq1>
<seq2>-QTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIK-----EVE----ATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV-----DFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP</seq2>
<ss_1> HHHH HHHHGGG EEEE HHHH HHHHHHHHH EEEEE HHHHHHHHHHHHHHGGGG EEEEE EEEEEE GGGG EEE HHHH EEEEE EEEEEEE EEEEEEE EEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHH EEEE HHHHHHGGG EEEEEEEHHHHHGGGG HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_1>
<ss_2>- HHHH HHHHHH EEEE HHHHHHHHH EEEEE HHHHHHHHHHHHHHHGGG EEEEE ----- ---- EEEE GGG EEE HHHH EEEEEE EEEEE----- EEEE EEE HHHHHHHHHHHH EEEE HHHHHHHHHHH EEEE HHHHH HHHHHHH EEEE HHHHHHH HHHHHHHHHHHHHH EE GGG HHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHH EEE HHHHHHGGG EEEEE HHHHHGGGG EEE HHHHHHHHHHHHHHHHHH EEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3GQY</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>3GQYB</entryIDChain>
<sequence>ISLQV-----DFLVT</sequence>
<secondary-structure>EEEEE----- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 4966 CA ILE B 181 5.517 10.301 -23.575 1.00 54.78 C </line>
<line>ATOM 4974 CA SER B 182 6.049 6.515 -23.344 1.00 55.95 C </line>
<line>ATOM 4980 CA LEU B 183 7.126 3.986 -26.021 1.00 57.70 C </line>
<line>ATOM 4988 CA GLN B 184 7.692 0.206 -26.178 1.00 60.29 C </line>
<line>ATOM 4993 CA VAL B 185 10.467 -1.161 -28.436 1.00 61.49 C </line>
<line>ATOM 4998 CA ASP B 191 21.361 1.344 -35.842 1.00 62.07 C </line>
<line>ATOM 5003 CA PHE B 192 17.541 1.718 -35.685 1.00 63.08 C </line>
<line>ATOM 5008 CA LEU B 193 14.600 0.975 -33.337 1.00 64.38 C </line>
<line>ATOM 5016 CA VAL B 194 10.920 0.302 -34.166 1.00 65.66 C </line>
<line>ATOM 5021 CA THR B 195 8.607 1.243 -31.275 1.00 67.13 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.28 15.54 16.27 19.10 21.95 13.40 10.65 6.96 3.83 </line>
<line>SER CA 9.86 13.40 14.27 17.53 20.43 10.22 7.11 3.84 </line>
<line>LEU CA 6.11 9.71 10.88 14.39 17.49 6.59 3.83 </line>
<line>GLN CA 5.28 8.62 9.98 13.77 16.78 3.83 </line>
<line>VAL CA 4.16 5.93 6.76 10.53 13.41 </line>
<line>ASP CA 13.55 10.63 7.22 3.84 </line>
<line>PHE CA 9.97 6.94 3.84 </line>
<line>LEU CA 6.34 3.83 </line>
<line>VAL CA 3.82 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 297</line>
<line>SER CA 301</line>
<line>LEU CA 314</line>
<line>GLN CA 239</line>
<line>VAL CA 253</line>
<line>ASP CA 186</line>
<line>PHE CA 233</line>
<line>LEU CA 268</line>
<line>VAL CA 218</line>
<line>THR CA 254</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AQF</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1AQFC</entryIDChain>
<sequence>ISLQVKQKGPDFLVT</sequence>
<secondary-structure>EEEEEEE EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 9252 CA ILE C 180 19.242 -34.936 66.724 1.00 26.20 C </line>
<line>ATOM 9260 CA SER C 181 21.549 -32.119 65.695 1.00 4.57 C </line>
<line>ATOM 9266 CA LEU C 182 25.276 -31.715 66.203 1.00 40.91 C </line>
<line>ATOM 9274 CA GLN C 183 27.808 -29.032 65.698 1.00 35.67 C </line>
<line>ATOM 9283 CA VAL C 184 31.174 -29.963 64.320 1.00 31.09 C </line>
<line>ATOM 9290 CA LYS C 185 33.616 -28.698 66.828 1.00 77.19 C </line>
<line>ATOM 9299 CA GLN C 186 36.704 -30.363 65.309 1.00 82.29 C </line>
<line>ATOM 9308 CA LYS C 187 37.732 -31.386 61.846 1.00 35.61 C </line>
<line>ATOM 9317 CA GLY C 188 39.917 -34.404 61.302 1.00 59.21 C </line>
<line>ATOM 9321 CA PRO C 189 40.623 -36.374 58.133 1.00 32.30 C </line>
<line>ATOM 9328 CA ASP C 190 38.438 -39.392 58.757 1.00 30.91 C </line>
<line>ATOM 9336 CA PHE C 191 36.609 -38.246 61.840 1.00 40.33 C </line>
<line>ATOM 9347 CA LEU C 192 34.908 -35.188 63.133 1.00 25.61 C </line>
<line>ATOM 9355 CA VAL C 193 34.310 -34.088 66.617 1.00 35.25 C </line>
<line>ATOM 9362 CA THR C 194 30.748 -32.960 67.227 1.00 22.37 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL LEU PHE ASP PRO GLY LYS GLN LYS VAL GLN LEU SER ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 11.69 15.09 16.07 18.34 21.26 23.09 21.38 19.45 18.11 15.67 13.15 10.45 6.86 3.78 </line>
<line>SER CA 9.36 12.94 13.94 16.71 19.65 20.95 19.02 16.65 15.26 12.59 9.96 6.98 3.78 </line>
<line>LEU CA 5.70 9.35 10.69 13.79 16.96 17.95 15.67 13.20 11.54 8.89 6.43 3.72 </line>
<line>GLN CA 5.14 8.29 9.74 13.31 16.39 16.59 13.96 10.90 9.00 5.93 3.75 </line>
<line>VAL CA 4.20 5.67 6.53 10.21 13.14 12.99 10.26 7.15 5.63 3.72 </line>
<line>LYS CA 5.15 5.44 7.58 11.18 14.24 13.55 10.14 7.00 3.82 </line>
<line>GLN CA 6.77 4.62 5.59 8.61 11.29 10.15 6.54 3.75 </line>
<line>LYS CA 8.96 6.46 4.91 6.95 8.61 6.86 3.77 </line>
<line>GLY CA 11.01 7.73 5.39 5.10 5.79 3.80 </line>
<line>PRO CA 13.85 10.82 7.69 5.78 3.78 </line>
<line>ASP CA 13.12 10.34 7.02 3.76 </line>
<line>PHE CA 9.56 6.74 3.73 </line>
<line>LEU CA 6.25 3.70 </line>
<line>VAL CA 3.79 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 360</line>
<line>SER CA 372</line>
<line>LEU CA 382</line>
<line>GLN CA 328</line>
<line>VAL CA 333</line>
<line>LYS CA 241</line>
<line>GLN CA 244</line>
<line>LYS CA 236</line>
<line>GLY CA 216</line>
<line>PRO CA 210</line>
<line>ASP CA 273</line>
<line>PHE CA 342</line>
<line>LEU CA 347</line>
<line>VAL CA 322</line>
<line>THR CA 370</line>
</n14>
</entryChain>
<parallel>
<x>-18.08099937438965</x>
<y>36.808998107910156</y>
<z>-93.0979995727539</z>
</parallel>
<rotation>
<x>0.3619999885559082</x>
<y>-0.6100000143051147</y>
<z>-0.7049999833106995</z>
<x>-0.335999995470047</x>
<y>-0.7910000085830688</y>
<z>0.5120000243186951</z>
<x>-0.8690000176429749</x>
<y>0.050999999046325684</y>
<z>-0.4909999966621399</z>
</rotation>
<rmsd>0.3285680115222931</rmsd>
<dmax>0.48303499817848206</dmax>
</indel>