NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AR4B-1UNFX
confEVID 1AR4B-1UNFX
pdbIDA 1AR4
pdbIDB 1UNF
pdbChainA B
pdbChainB X
identity 0.302799999713898
indelSize 3
alignment <alignment>
<seq1>---AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTA---------LDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAPKGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLG------KRINTLQFYDHQNNLP-AGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNV-VNWDDVALRFSEARVA--</seq1>
<seq2>KVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHRTYVENLKKQVTELDGKSLEEIIVTAYNKGDIL-------PAFNNAAQVWNHDFFWECMKP--GGGGKPSGELLELIERDFGSFEKFLDEFKAAAATQFGSGWAWLAYKASKLDADEDNKLVVIKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALSA</seq2>
<ss_1>--- HHHHHHIIIIHHHHHHHHHHHH---------HHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHH EEEEEEEEE ------ EEEEEEEE - EEE HHHH HHHHHHHGGGG-EEHHHHHHHHHHH --</ss_1>
<ss_2> HHHHHHIIIIHHHHHHHHHHHH HHHHHHHH GGG ------- HHHHHHHHHHHHHHH -- HHHHHHHHHHH HHHHHHHHHHHHHH EEEEEEEEEEGGG EEEEEEE EEE EEE HHHH HHHHHHHHHH EEHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AR4</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1AR4B</entryIDChain>
<sequence>QNNLP-AGSIP</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 2751 CA GLN B 147 31.334 18.790 22.733 1.00 7.05 C </line>
<line>ATOM 2760 CA ASN B 148 33.944 16.032 23.111 1.00 7.37 C </line>
<line>ATOM 2768 CA ASN B 149 34.513 12.506 21.753 1.00 6.58 C </line>
<line>ATOM 2776 CA LEU B 150 32.612 12.748 18.444 1.00 7.59 C </line>
<line>ATOM 2784 CA PRO B 151 33.458 12.953 14.710 1.00 8.98 C </line>
<line>ATOM 2791 CA ALA B 152 32.410 15.999 12.681 1.00 9.52 C </line>
<line>ATOM 2796 CA GLY B 153 29.337 15.333 10.553 1.00 12.33 C </line>
<line>ATOM 2800 CA SER B 154 27.698 13.072 13.155 1.00 13.72 C </line>
<line>ATOM 2806 CA ILE B 155 23.900 13.380 12.959 1.00 12.21 C </line>
<line>ATOM 2814 CA PRO B 156 22.184 12.923 16.357 1.00 10.11 C </line>
</atom-coordinate>
<distance-map>
<line> PRO ILE SER GLY ALA PRO LEU ASN ASN GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 12.60 13.42 11.73 12.82 10.49 10.15 7.52 7.11 3.82 </line>
<line>ASN CA 13.91 14.53 12.12 13.39 10.54 8.96 5.86 3.82 </line>
<line>ASN CA 13.46 13.81 10.99 12.66 9.95 7.14 3.82 </line>
<line>LEU CA 10.64 10.31 7.23 8.93 6.62 3.83 </line>
<line>PRO CA 11.39 9.73 5.97 6.32 3.81 </line>
<line>ALA CA 11.29 8.91 5.57 3.80 </line>
<line>GLY CA 9.52 6.26 3.82 </line>
<line>SER CA 6.38 3.82 </line>
<line>ILE CA 3.83 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>GLN CA 350</line>
<line>ASN CA 292</line>
<line>ASN CA 264</line>
<line>LEU CA 280</line>
<line>PRO CA 220</line>
<line>ALA CA 195</line>
<line>GLY CA 223</line>
<line>SER CA 316</line>
<line>ILE CA 371</line>
<line>PRO CA 468</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>VNPLVWGGYYP</sequence>
<secondary-structure> EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 1235 CA VAL X 180 -27.930 46.119 46.304 1.00 13.98 C </line>
<line>ATOM 1242 CA ASN X 181 -24.968 45.775 43.942 1.00 16.00 C </line>
<line>ATOM 1250 CA PRO X 182 -22.121 48.030 42.868 1.00 20.09 C </line>
<line>ATOM 1257 CA LEU X 183 -23.965 48.929 39.642 1.00 24.72 C </line>
<line>ATOM 1265 CA VAL X 184 -26.108 51.376 41.587 1.00 25.46 C </line>
<line>ATOM 1272 CA TRP X 185 -23.210 53.455 42.917 1.00 35.23 C </line>
<line>ATOM 1286 CA GLY X 186 -21.513 53.732 40.322 1.00 32.56 C </line>
<line>ATOM 1290 CA GLY X 187 -17.970 54.182 39.155 1.00 23.50 C </line>
<line>ATOM 1294 CA TYR X 188 -17.648 50.544 40.303 1.00 21.14 C </line>
<line>ATOM 1306 CA TYR X 189 -17.261 47.480 38.132 1.00 17.99 C </line>
<line>ATOM 1318 CA PRO X 190 -18.188 44.253 39.898 1.00 15.32 C </line>
</atom-coordinate>
<distance-map>
<line> PRO TYR TYR GLY GLY TRP VAL LEU PRO ASN VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 11.81 13.51 12.70 14.67 11.62 9.36 7.29 8.25 7.01 3.80 </line>
<line>ASN CA 8.04 9.80 9.46 11.94 9.40 7.95 6.18 5.43 3.79 </line>
<line>PRO CA 6.21 6.81 5.74 8.30 6.27 5.53 5.36 3.82 </line>
<line>LEU CA 7.44 7.02 6.55 7.99 5.44 5.64 3.79 </line>
<line>VAL CA 10.79 10.27 8.60 8.95 5.32 3.81 </line>
<line>TRP CA 10.91 9.69 6.80 6.49 3.11 </line>
<line>GLY CA 10.05 7.87 5.01 3.76 </line>
<line>GLY CA 9.96 6.82 3.83 </line>
<line>TYR CA 6.33 3.78 </line>
<line>TYR CA 3.79 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>VAL CA 453</line>
<line>ASN CA 497</line>
<line>PRO CA 452</line>
<line>LEU CA 448</line>
<line>VAL CA 384</line>
<line>TRP CA 316</line>
<line>GLY CA 327</line>
<line>GLY CA 304</line>
<line>TYR CA 396</line>
<line>TYR CA 434</line>
<line>PRO CA 511</line>
</n14>
</entryChain>
<parallel>
<x>54.691001892089844</x>
<y>-35.15700149536133</y>
<z>-24.62299919128418</z>
</parallel>
<rotation>
<x>-0.9229999780654907</x>
<y>-0.18400000035762787</y>
<z>-0.33899998664855957</z>
<x>0.2160000056028366</x>
<y>0.4819999933242798</y>
<z>-0.8489999771118164</z>
<x>-0.3190000057220459</x>
<y>0.8569999933242798</y>
<z>0.4050000011920929</z>
</rotation>
<rmsd>2.9240429401397705</rmsd>
<dmax>5.314901828765869</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1AR4</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1AR4B</entryIDChain>
<sequence>SWWNV-VNWDD</sequence>
<secondary-structure>HGGGG-EEHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3033 CA SER B 181 13.341 4.440 33.476 1.00 16.83 C </line>
<line>ATOM 3039 CA TRP B 182 14.244 6.713 30.541 1.00 9.69 C </line>
<line>ATOM 3053 CA TRP B 183 13.637 4.014 27.905 1.00 13.17 C </line>
<line>ATOM 3067 CA ASN B 184 9.915 4.205 28.765 1.00 14.04 C </line>
<line>ATOM 3075 CA VAL B 185 9.556 7.759 27.424 1.00 14.04 C </line>
<line>ATOM 3082 CA VAL B 186 11.614 7.512 24.213 1.00 11.46 C </line>
<line>ATOM 3089 CA ASN B 187 9.689 8.935 21.239 1.00 12.47 C </line>
<line>ATOM 3097 CA TRP B 188 10.617 6.566 18.414 1.00 12.84 C </line>
<line>ATOM 3111 CA ASP B 189 8.608 8.660 15.941 1.00 14.40 C </line>
<line>ATOM 3119 CA ASP B 190 11.018 11.552 16.460 1.00 11.21 C </line>
</atom-coordinate>
<distance-map>
<line> ASP ASP TRP ASN VAL VAL ASN TRP TRP SER </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 18.59 18.65 15.45 13.54 9.91 7.87 5.83 5.60 3.82 </line>
<line>TRP CA 15.23 15.77 12.66 10.59 6.90 5.73 5.31 3.82 </line>
<line>TRP CA 13.95 13.78 10.28 9.18 5.47 5.56 3.82 </line>
<line>ASN CA 14.37 13.64 10.64 8.89 5.88 3.82 </line>
<line>VAL CA 11.69 11.56 9.15 6.30 3.82 </line>
<line>VAL CA 8.76 8.88 5.96 3.82 </line>
<line>ASN CA 5.61 5.41 3.80 </line>
<line>TRP CA 5.37 3.81 </line>
<line>ASP CA 3.80 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>SER CA 344</line>
<line>TRP CA 468</line>
<line>TRP CA 446</line>
<line>ASN CA 349</line>
<line>VAL CA 413</line>
<line>VAL CA 466</line>
<line>ASN CA 400</line>
<line>TRP CA 396</line>
<line>ASP CA 314</line>
<line>ASP CA 367</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>VFMDKLVSWDA</sequence>
<secondary-structure>HHHH EEHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1540 CA VAL X 215 -14.909 27.036 51.212 1.00 17.49 C </line>
<line>ATOM 1547 CA PHE X 216 -16.268 29.339 48.506 1.00 15.04 C </line>
<line>ATOM 1558 CA MET X 217 -12.868 30.958 48.200 1.00 14.94 C </line>
<line>ATOM 1566 CA ASP X 218 -10.887 27.728 48.634 1.00 16.85 C </line>
<line>ATOM 1574 CA LYS X 219 -12.870 25.528 46.245 1.00 17.80 C </line>
<line>ATOM 1583 CA LEU X 220 -15.500 27.385 44.197 1.00 17.00 C </line>
<line>ATOM 1591 CA VAL X 221 -14.281 30.783 42.978 1.00 15.88 C </line>
<line>ATOM 1598 CA SER X 222 -13.480 31.028 39.279 1.00 17.21 C </line>
<line>ATOM 1604 CA TRP X 223 -10.506 33.343 39.005 1.00 17.98 C </line>
<line>ATOM 1618 CA ASP X 224 -10.806 33.052 35.208 1.00 18.69 C </line>
<line>ATOM 1626 CA ALA X 225 -14.212 34.695 35.498 1.00 15.47 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ASP TRP SER VAL LEU LYS ASP MET PHE VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 17.50 17.58 14.43 12.66 9.07 7.05 5.58 4.83 5.35 3.80 </line>
<line>PHE CA 14.22 14.85 11.81 9.79 6.05 4.79 5.58 5.62 3.78 </line>
<line>MET CA 13.31 13.32 9.79 8.94 5.41 5.98 5.77 3.81 </line>
<line>ASP CA 15.24 14.44 11.15 10.25 7.27 6.41 3.81 </line>
<line>LYS CA 14.19 13.52 10.91 8.90 6.35 3.82 </line>
<line>LEU CA 11.44 11.62 9.35 6.45 3.81 </line>
<line>VAL CA 8.44 8.81 6.05 3.79 </line>
<line>SER CA 5.32 5.27 3.78 </line>
<line>TRP CA 5.28 3.82 </line>
<line>ASP CA 3.79 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>VAL CA 359</line>
<line>PHE CA 484</line>
<line>MET CA 434</line>
<line>ASP CA 319</line>
<line>LYS CA 312</line>
<line>LEU CA 414</line>
<line>VAL CA 456</line>
<line>SER CA 384</line>
<line>TRP CA 389</line>
<line>ASP CA 304</line>
<line>ALA CA 373</line>
</n14>
</entryChain>
<parallel>
<x>24.834999084472656</x>
<y>-23.200000762939453</y>
<z>-19.010000228881836</z>
</parallel>
<rotation>
<x>-0.6190000176429749</x>
<y>-0.7400000095367432</y>
<z>-0.2619999945163727</z>
<x>0.7059999704360962</x>
<y>-0.3790000081062317</y>
<z>-0.5979999899864197</z>
<x>0.3440000116825104</x>
<y>-0.5550000071525574</y>
<z>0.7580000162124634</z>
</rotation>
<rmsd>1.1196500062942505</rmsd>
<dmax>2.1452770233154297</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>ECMKP--GGGGK</sequence>
<secondary-structure>H -- </secondary-structure>
<atom-coordinate>
<line>ATOM 694 CA GLU X 100 -20.497 32.916 36.776 1.00 18.38 C </line>
<line>ATOM 703 CA CYS X 101 -18.262 33.452 39.821 1.00 14.26 C </line>
<line>ATOM 709 CA MET X 102 -17.809 29.777 40.475 1.00 14.02 C </line>
<line>ATOM 717 CA LYS X 103 -16.605 26.689 38.657 1.00 18.17 C </line>
<line>ATOM 726 CA PRO X 104 -16.081 22.975 39.260 1.00 18.81 C </line>
<line>ATOM 733 CA GLY X 105 -12.475 22.712 40.528 1.00 18.60 C </line>
<line>ATOM 737 CA GLY X 106 -12.304 26.399 41.369 1.00 17.61 C </line>
<line>ATOM 741 CA GLY X 107 -10.475 27.945 44.233 1.00 17.12 C </line>
<line>ATOM 745 CA GLY X 108 -6.747 28.571 44.478 1.00 17.94 C </line>
<line>ATOM 749 CA LYS X 109 -5.200 31.906 43.596 1.00 19.65 C </line>
</atom-coordinate>
<distance-map>
<line> LYS GLY GLY GLY GLY PRO LYS MET CYS GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 16.78 16.35 13.44 11.43 13.51 11.16 7.58 5.55 3.82 </line>
<line>CYS CA 13.68 13.35 10.51 9.36 12.22 10.72 7.06 3.76 </line>
<line>MET CA 13.16 11.83 8.44 6.52 8.85 7.12 3.78 </line>
<line>LYS CA 13.48 11.60 8.38 5.09 6.03 3.80 </line>
<line>PRO CA 14.73 12.07 8.99 5.52 3.83 </line>
<line>GLY CA 12.12 9.10 6.72 3.79 </line>
<line>GLY CA 9.26 6.73 3.73 </line>
<line>GLY CA 6.63 3.79 </line>
<line>GLY CA 3.78 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>GLU CA 433</line>
<line>CYS CA 498</line>
<line>MET CA 465</line>
<line>LYS CA 351</line>
<line>PRO CA 275</line>
<line>GLY CA 235</line>
<line>GLY CA 307</line>
<line>GLY CA 334</line>
<line>GLY CA 264</line>
<line>LYS CA 309</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AR4</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1AR4B</entryIDChain>
<sequence>KNMAPKGSAPER</sequence>
<secondary-structure>H </secondary-structure>
<atom-coordinate>
<line>ATOM 2238 CA LYS B 80 12.101 15.964 21.207 1.00 11.88 C </line>
<line>ATOM 2247 CA ASN B 81 13.508 12.458 21.712 1.00 8.78 C </line>
<line>ATOM 2255 CA MET B 82 11.016 12.093 24.562 1.00 8.83 C </line>
<line>ATOM 2263 CA ALA B 83 7.222 11.958 24.788 1.00 13.04 C </line>
<line>ATOM 2268 CA PRO B 84 4.640 10.912 27.433 1.00 17.46 C </line>
<line>ATOM 2275 CA LYS B 85 4.301 7.146 27.996 1.00 26.02 C </line>
<line>ATOM 2284 CA GLY B 86 1.738 5.887 25.487 1.00 30.52 C </line>
<line>ATOM 2288 CA SER B 87 2.229 8.573 22.839 1.00 38.61 C </line>
<line>ATOM 2294 CA ALA B 88 4.508 6.549 20.552 1.00 38.78 C </line>
<line>ATOM 2299 CA PRO B 89 5.440 2.865 20.010 1.00 39.22 C </line>
<line>ATOM 2306 CA GLU B 90 7.639 1.422 22.768 1.00 41.16 C </line>
<line>ATOM 2315 CA ARG B 91 9.776 -0.247 20.085 1.00 34.79 C </line>
</atom-coordinate>
<distance-map>
<line> ARG GLU PRO ALA SER GLY LYS PRO ALA MET ASN LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 16.42 15.29 14.74 12.11 12.44 15.08 13.59 10.95 7.26 5.24 3.81 </line>
<line>ASN CA 13.34 12.54 12.65 10.83 11.98 14.00 12.35 10.67 7.02 3.80 </line>
<line>MET CA 13.19 11.34 11.70 9.44 9.62 11.20 9.02 7.09 3.80 </line>
<line>ALA CA 13.33 10.74 10.43 7.39 6.34 8.21 6.48 3.84 </line>
<line>PRO CA 14.31 10.99 10.98 8.15 5.69 6.12 3.82 </line>
<line>LYS CA 12.13 8.44 9.13 7.47 5.74 3.80 </line>
<line>GLY CA 11.46 7.88 7.27 5.70 3.80 </line>
<line>SER CA 11.93 8.97 7.13 3.81 </line>
<line>ALA CA 8.61 6.40 3.84 </line>
<line>PRO CA 5.34 3.81 </line>
<line>GLU CA 3.81 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>LYS CA 416</line>
<line>ASN CA 479</line>
<line>MET CA 490</line>
<line>ALA CA 372</line>
<line>PRO CA 297</line>
<line>LYS CA 263</line>
<line>GLY CA 185</line>
<line>SER CA 209</line>
<line>ALA CA 257</line>
<line>PRO CA 234</line>
<line>GLU CA 279</line>
<line>ARG CA 312</line>
</n14>
</entryChain>
<parallel>
<x>-23.145999908447266</x>
<y>17.687000274658203</y>
<z>17.25200080871582</z>
</parallel>
<rotation>
<x>-0.5479999780654907</x>
<y>0.7559999823570251</y>
<z>0.3569999933242798</z>
<x>-0.4350000023841858</x>
<y>0.10599999874830246</y>
<z>-0.8939999938011169</z>
<x>-0.7139999866485596</x>
<y>-0.6460000276565552</y>
<z>0.2709999978542328</z>
</rotation>
<rmsd>1.4261080026626587</rmsd>
<dmax>1.7219810485839844</dmax>
</indel>