NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AR5A-1EN6C
confEVID 1AR5A-1EN6C
pdbIDA 1AR5
pdbIDB 1EN6
pdbChainA A
pdbChainB C
identity 0.388599991798401
indelSize 2
alignment <alignment>
<seq1>AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGA-------INKLEKDLAFNLAGHVNHSVFWKNMAPKGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDH------QNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEARVA</seq1>
<seq2>-SYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG--DKLAVVSTANLDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK--</seq2>
<ss_1> HHHHHHIIIIHHHHHHHHHHHHHHHHHHHHH -------HHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHH EEEEEEEEE EEEEEEEE ------ EEE HHHH HHHHHHHGGGGEEHHHHHHHHHHH </ss_1>
<ss_2>- HHHHHHIIIIHHHHHHHHHHHHGGG GGG GGG HHHHHHHHHHHHHHHHHHH ---- HHHHHHHHHHH HHHHHHHHHHHHHH EEEEEEEEE -- EEEEEEEE EEE HHHH HHHHHHGGG EEHHHHHHHHHH --</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1EN6</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1EN6C</entryIDChain>
<sequence>KGLKK----GTTLQ</sequence>
<secondary-structure>H ---- </secondary-structure>
<atom-coordinate>
<line>ATOM 4004 CA LYS C 86 93.580 7.883 39.519 1.00 28.12 C </line>
<line>ATOM 4013 CA GLY C 87 93.639 7.531 35.753 1.00 24.93 C </line>
<line>ATOM 4017 CA LEU C 88 96.573 9.915 35.281 1.00 25.98 C </line>
<line>ATOM 4025 CA LYS C 89 100.258 8.991 35.554 1.00 34.04 C </line>
<line>ATOM 4034 CA LYS C 90 103.460 9.336 33.521 1.00 38.84 C </line>
<line>ATOM 4043 CA GLY C 91 105.647 6.395 32.556 1.00 44.56 C </line>
<line>ATOM 4047 CA THR C 92 103.040 3.677 31.992 1.00 43.88 C </line>
<line>ATOM 4054 CA THR C 93 102.688 1.546 28.867 1.00 47.67 C </line>
<line>ATOM 4061 CA LEU C 94 99.698 -0.178 27.273 1.00 48.41 C </line>
<line>ATOM 4069 CA GLN C 95 100.071 -3.964 27.410 1.00 53.21 C </line>
</atom-coordinate>
<distance-map>
<line> GLN LEU THR THR GLY LYS LYS LEU GLY LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 18.14 15.89 15.38 12.80 14.01 11.65 7.85 5.57 3.78 </line>
<line>GLY CA 15.59 12.96 12.85 10.83 12.48 10.23 6.78 3.81 </line>
<line>LEU CA 16.33 13.26 12.19 9.57 10.11 7.13 3.81 </line>
<line>LYS CA 15.30 12.37 10.30 6.98 6.69 3.81 </line>
<line>LYS CA 15.02 11.99 9.11 5.88 3.79 </line>
<line>GLY CA 12.84 10.32 6.77 3.81 </line>
<line>THR CA 9.39 6.95 3.80 </line>
<line>THR CA 6.27 3.80 </line>
<line>LEU CA 3.81 </line>
<line>GLN CA </line>
</distance-map>
<n14>
<line>LYS CA 390</line>
<line>GLY CA 448</line>
<line>LEU CA 465</line>
<line>LYS CA 348</line>
<line>LYS CA 286</line>
<line>GLY CA 211</line>
<line>THR CA 238</line>
<line>THR CA 236</line>
<line>LEU CA 303</line>
<line>GLN CA 221</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AR5</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AR5A</entryIDChain>
<sequence>KNMAPKGSAPERPT</sequence>
<secondary-structure>H </secondary-structure>
<atom-coordinate>
<line>ATOM 632 CA LYS A 80 40.102 17.348 55.570 1.00 13.27 C </line>
<line>ATOM 641 CA ASN A 81 39.849 20.852 54.076 1.00 11.41 C </line>
<line>ATOM 649 CA MET A 82 36.529 21.278 55.880 1.00 12.83 C </line>
<line>ATOM 657 CA ALA A 83 35.412 21.488 59.505 1.00 15.93 C </line>
<line>ATOM 662 CA PRO A 84 32.262 22.634 61.320 1.00 17.41 C </line>
<line>ATOM 669 CA LYS A 85 32.070 26.433 61.497 1.00 20.38 C </line>
<line>ATOM 678 CA GLY A 86 33.647 27.698 64.706 1.00 27.29 C </line>
<line>ATOM 682 CA SER A 87 35.953 24.672 65.027 1.00 30.65 C </line>
<line>ATOM 688 CA ALA A 88 38.646 26.405 62.975 1.00 33.80 C </line>
<line>ATOM 693 CA PRO A 89 39.794 29.946 62.050 1.00 38.11 C </line>
<line>ATOM 700 CA GLU A 90 37.658 31.853 59.535 1.00 46.77 C </line>
<line>ATOM 709 CA ARG A 91 40.783 33.325 57.901 1.00 43.46 C </line>
<line>ATOM 720 CA PRO A 92 44.388 32.192 57.168 1.00 38.76 C </line>
<line>ATOM 727 CA THR A 93 47.106 33.284 59.598 1.00 39.59 C </line>
</atom-coordinate>
<distance-map>
<line> THR PRO ARG GLU PRO ALA SER GLY LYS PRO ALA MET ASN LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 17.87 15.53 16.16 15.23 14.17 11.79 12.66 15.24 13.50 11.07 7.39 5.32 3.82 </line>
<line>ASN CA 15.42 12.60 13.08 12.47 12.09 10.56 12.24 14.08 12.11 10.64 7.04 3.80 </line>
<line>MET CA 16.43 13.51 12.93 11.25 11.13 9.01 9.77 11.29 8.83 7.05 3.80 </line>
<line>ALA CA 16.61 14.16 13.10 10.61 9.86 6.83 6.40 8.29 6.29 3.81 </line>
<line>PRO CA 18.35 15.99 14.09 10.83 10.52 7.60 5.61 6.25 3.81 </line>
<line>LYS CA 16.63 14.27 11.68 8.03 8.50 6.74 5.54 3.79 </line>
<line>GLY CA 15.44 13.87 11.35 7.75 7.06 5.45 3.82 </line>
<line>SER CA 15.10 13.76 12.21 9.20 7.17 3.80 </line>
<line>ALA CA 11.41 10.01 8.84 6.52 3.84 </line>
<line>PRO CA 8.40 7.07 5.44 3.81 </line>
<line>GLU CA 9.56 7.14 3.82 </line>
<line>ARG CA 6.55 3.85 </line>
<line>PRO CA 3.81 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>LYS CA 416</line>
<line>ASN CA 474</line>
<line>MET CA 486</line>
<line>ALA CA 369</line>
<line>PRO CA 300</line>
<line>LYS CA 270</line>
<line>GLY CA 185</line>
<line>SER CA 205</line>
<line>ALA CA 254</line>
<line>PRO CA 237</line>
<line>GLU CA 274</line>
<line>ARG CA 319</line>
<line>PRO CA 356</line>
<line>THR CA 245</line>
</n14>
</entryChain>
<parallel>
<x>62.0620002746582</x>
<y>-17.930999755859375</y>
<z>-24.099000930786133</z>
</parallel>
<rotation>
<x>-0.1979999989271164</x>
<y>-0.8799999952316284</y>
<z>0.4309999942779541</z>
<x>0.4519999921321869</x>
<y>-0.47200000286102295</y>
<z>-0.7570000290870667</z>
<x>0.8700000047683716</x>
<y>0.04500000178813934</y>
<z>0.492000013589859</z>
</rotation>
<rmsd>2.3074300289154053</rmsd>
<dmax>3.977078914642334</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1EN6</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1EN6C</entryIDChain>
<sequence>LVLKG--DKLAV</sequence>
<secondary-structure>EEEE -- EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 4370 CA LEU C 131 86.445 4.030 26.945 1.00 26.07 C </line>
<line>ATOM 4378 CA VAL C 132 83.778 1.722 28.376 1.00 29.51 C </line>
<line>ATOM 4385 CA LEU C 133 83.223 -2.017 28.643 1.00 36.72 C </line>
<line>ATOM 4393 CA LYS C 134 79.739 -3.033 27.492 1.00 42.97 C </line>
<line>ATOM 4402 CA GLY C 135 79.281 -6.721 28.126 1.00 45.58 C </line>
<line>ATOM 4406 CA ASP C 136 82.395 -8.235 26.590 1.00 46.19 C </line>
<line>ATOM 4414 CA LYS C 137 83.218 -5.540 24.042 1.00 44.82 C </line>
<line>ATOM 4423 CA LEU C 138 85.083 -2.238 24.428 1.00 38.49 C </line>
<line>ATOM 4431 CA ALA C 139 83.538 0.951 23.055 1.00 33.04 C </line>
<line>ATOM 4436 CA VAL C 140 84.097 4.707 22.970 1.00 30.89 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ALA LEU LYS ASP GLY LYS LEU VAL LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 4.67 5.75 6.89 10.51 12.92 12.97 9.75 7.06 3.81 </line>
<line>VAL CA 6.18 5.38 5.74 8.48 10.21 9.57 6.30 3.79 </line>
<line>LEU CA 8.84 6.34 4.61 5.79 6.60 6.16 3.81 </line>
<line>LYS CA 9.97 7.07 6.21 5.50 5.91 3.77 </line>
<line>GLY CA 13.43 10.13 8.21 5.79 3.79 </line>
<line>ASP CA 13.55 9.91 6.92 3.80 </line>
<line>LYS CA 10.34 6.57 3.81 </line>
<line>LEU CA 7.16 3.80 </line>
<line>ALA CA 3.80 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 526</line>
<line>VAL CA 437</line>
<line>LEU CA 345</line>
<line>LYS CA 277</line>
<line>GLY CA 199</line>
<line>ASP CA 211</line>
<line>LYS CA 244</line>
<line>LEU CA 362</line>
<line>ALA CA 378</line>
<line>VAL CA 416</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AR5</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AR5A</entryIDChain>
<sequence>LVWDPLGKRINT</sequence>
<secondary-structure>EEEE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 988 CA LEU A 129 44.797 26.203 45.506 1.00 12.59 C </line>
<line>ATOM 996 CA VAL A 130 48.122 24.440 44.937 1.00 11.80 C </line>
<line>ATOM 1003 CA TRP A 131 51.801 24.759 45.770 1.00 12.48 C </line>
<line>ATOM 1017 CA ASP A 132 53.950 25.042 42.646 1.00 13.42 C </line>
<line>ATOM 1025 CA PRO A 133 57.357 23.479 43.529 1.00 15.42 C </line>
<line>ATOM 1032 CA LEU A 134 59.025 24.814 40.374 1.00 17.86 C </line>
<line>ATOM 1040 CA GLY A 135 57.968 28.432 40.810 1.00 16.45 C </line>
<line>ATOM 1044 CA LYS A 136 57.928 28.156 44.621 1.00 18.07 C </line>
<line>ATOM 1053 CA ARG A 137 54.548 29.866 44.841 1.00 13.48 C </line>
<line>ATOM 1064 CA ILE A 138 50.840 29.344 45.444 1.00 13.32 C </line>
<line>ATOM 1072 CA ASN A 139 48.600 29.310 42.359 1.00 13.07 C </line>
<line>ATOM 1080 CA THR A 140 44.938 28.604 41.653 1.00 11.43 C </line>
</atom-coordinate>
<distance-map>
<line> THR ASN ILE ARG LYS GLY LEU PRO ASP TRP VAL LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 4.54 5.83 6.81 10.44 13.30 14.16 15.19 13.00 9.66 7.16 3.81 </line>
<line>VAL CA 6.19 5.53 5.63 8.41 10.49 11.40 11.83 9.39 6.29 3.79 </line>
<line>TRP CA 8.88 6.53 4.70 5.87 7.10 8.72 9.02 6.13 3.80 </line>
<line>ASP CA 9.74 6.85 6.00 5.33 5.42 5.57 5.57 3.85 </line>
<line>PRO CA 13.57 10.59 8.97 7.10 4.84 5.68 3.81 </line>
<line>LEU CA 14.64 11.53 10.64 8.09 5.51 3.79 </line>
<line>GLY CA 13.06 9.54 8.55 5.48 3.82 </line>
<line>LYS CA 13.33 9.67 7.23 3.79 </line>
<line>ARG CA 10.20 6.47 3.79 </line>
<line>ILE CA 7.05 3.81 </line>
<line>ASN CA 3.80 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>LEU CA 534</line>
<line>VAL CA 459</line>
<line>TRP CA 363</line>
<line>ASP CA 278</line>
<line>PRO CA 221</line>
<line>LEU CA 164</line>
<line>GLY CA 190</line>
<line>LYS CA 236</line>
<line>ARG CA 298</line>
<line>ILE CA 399</line>
<line>ASN CA 395</line>
<line>THR CA 426</line>
</n14>
</entryChain>
<parallel>
<x>30.476999282836914</x>
<y>-29.165000915527344</y>
<z>-17.832000732421875</z>
</parallel>
<rotation>
<x>-0.3409999907016754</x>
<y>-0.9369999766349792</y>
<z>0.07599999755620956</z>
<x>0.4390000104904175</x>
<y>-0.23000000417232513</y>
<z>-0.8679999709129333</z>
<x>0.8309999704360962</x>
<y>-0.2630000114440918</y>
<z>0.49000000953674316</z>
</rotation>
<rmsd>0.6660490036010742</rmsd>
<dmax>1.1538070440292358</dmax>
</indel>