NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ASDA-2AY1B
confEVID 1ASDA-2AY1B
pdbIDA 1ASD
pdbIDB 2AY1
pdbChainA A
pdbChainB B
identity 0.433600008487701
indelSize 3
alignment <alignment>
<seq1>MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI---IKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL-</seq1>
<seq2>MLGNLKPQAPDKILALMGEF------GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSE---TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDL---SGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVGV</seq2>
<ss_1> HHHHHGGG HHHHHHHHHHHHH HHHHHHHHHHHH HHHH EEEEEEE HHHHHHHHHHHHHHH EEEE HHHHHH EEEEEEEEE EEEHHHHHHGGGG EEEE HHHHHHHHHHHHH EEEEEE HHHHHHHHH EEEEEEE GGG EEEEEEE HHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGG---GG HHHHHHHH EEEEEGG HHHHHHHHH -</ss_1>
<ss_2> HHHHHHHH ------ HHHHHHHHHHHHH HHHHHHHHHHHHGGG GG---EEEEEEE HHHHHHHHHHHHHHHH EEE HHHHHHH EEE EE EEHHHHHHHGGG EEEE HHHHHHHHHHHHH EEEEEE HHHHHHHHHH EEEEEEE GGG EEEEEEE HHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH --- GGG HHHH HHHHHHHH EEEE EEEEEGG HHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ASD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ASDA</entryIDChain>
<sequence>DFSFI---IKQNG</sequence>
<secondary-structure> GGG---GG </secondary-structure>
<atom-coordinate>
<line>ATOM 2613 CA ASP A 349 -133.750 21.808 40.687 1.00 64.28 C </line>
<line>ATOM 2621 CA PHE A 350 -134.756 19.944 43.763 1.00 34.97 C </line>
<line>ATOM 2632 CA SER A 351 -136.128 16.974 41.794 1.00 26.53 C </line>
<line>ATOM 2638 CA PHE A 352 -133.560 14.519 43.284 1.00 22.77 C </line>
<line>ATOM 2649 CA ILE A 353 -135.382 14.249 46.622 1.00 25.62 C </line>
<line>ATOM 2657 CA ILE A 354 -138.218 12.415 44.903 1.00 30.36 C </line>
<line>ATOM 2665 CA LYS A 355 -135.795 9.458 44.386 1.00 33.39 C </line>
<line>ATOM 2674 CA GLN A 356 -134.897 9.370 48.079 1.00 22.60 C </line>
<line>ATOM 2683 CA ASN A 357 -137.102 7.173 50.335 1.00 23.57 C </line>
<line>ATOM 2691 CA GLY A 358 -138.146 7.083 53.886 1.00 17.13 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ASN GLN LYS ILE ILE PHE SER PHE ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 20.26 17.85 14.51 13.05 11.22 9.75 7.74 5.50 3.73 </line>
<line>PHE CA 16.71 14.55 11.42 10.56 8.36 6.40 5.58 3.82 </line>
<line>SER CA 15.75 13.04 9.94 7.96 5.90 5.59 3.85 </line>
<line>PHE CA 13.74 10.78 7.16 5.64 5.36 3.81 </line>
<line>ILE CA 10.57 8.17 5.11 5.30 3.79 </line>
<line>ILE CA 10.45 7.63 5.51 3.86 </line>
<line>LYS CA 10.07 6.51 3.80 </line>
<line>GLN CA 7.04 3.84 </line>
<line>ASN CA 3.70 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>ASP CA 259</line>
<line>PHE CA 342</line>
<line>SER CA 287</line>
<line>PHE CA 321</line>
<line>ILE CA 414</line>
<line>ILE CA 358</line>
<line>LYS CA 342</line>
<line>GLN CA 442</line>
<line>ASN CA 473</line>
<line>GLY CA 516</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2AY1</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2AY1B</entryIDChain>
<sequence>GSDRFGFVAEHRG</sequence>
<secondary-structure> GGG HHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 5449 CA GLY B 346 117.268 73.366 23.622 1.00 60.42 C </line>
<line>ATOM 5453 CA SER B 347 116.320 70.064 25.217 1.00 59.60 C </line>
<line>ATOM 5459 CA ASP B 348 118.856 67.466 24.093 1.00 57.62 C </line>
<line>ATOM 5467 CA ARG B 349 116.536 64.939 25.796 1.00 53.83 C </line>
<line>ATOM 5478 CA PHE B 350 115.033 64.061 22.405 1.00 49.55 C </line>
<line>ATOM 5489 CA GLY B 351 118.313 62.916 20.870 1.00 44.99 C </line>
<line>ATOM 5493 CA PHE B 352 117.332 59.246 21.193 1.00 40.75 C </line>
<line>ATOM 5504 CA VAL B 353 115.142 59.821 18.123 1.00 38.65 C </line>
<line>ATOM 5511 CA ALA B 354 118.138 59.876 15.773 1.00 36.69 C </line>
<line>ATOM 5516 CA GLU B 355 119.706 57.016 17.737 1.00 35.62 C </line>
<line>ATOM 5525 CA HIS B 356 116.766 54.635 17.327 1.00 33.34 C </line>
<line>ATOM 5535 CA ARG B 357 116.944 52.421 14.255 1.00 33.64 C </line>
<line>ATOM 5546 CA GLY B 358 113.994 51.256 12.184 1.00 33.50 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ARG HIS GLU ALA VAL PHE GLY PHE ARG ASP SER GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 25.11 22.95 19.77 17.55 15.63 14.77 14.33 10.86 9.65 8.73 6.13 3.79 </line>
<line>SER CA 23.00 20.78 17.34 15.42 14.01 12.52 11.59 8.60 6.75 5.16 3.80 </line>
<line>ASP CA 20.69 18.08 14.66 12.26 11.28 10.39 8.85 5.60 5.39 3.83 </line>
<line>ARG CA 19.47 17.03 13.34 11.74 11.34 9.33 7.36 5.61 3.81 </line>
<line>PHE CA 16.42 14.34 10.85 9.66 8.43 6.03 5.47 3.80 </line>
<line>GLY CA 15.17 12.48 9.14 6.82 5.94 5.21 3.81 </line>
<line>PHE CA 12.50 9.74 6.04 4.75 5.52 3.81 </line>
<line>VAL CA 10.49 8.54 5.49 5.37 3.81 </line>
<line>ALA CA 10.22 7.70 5.64 3.81 </line>
<line>GLU CA 9.83 6.39 3.81 </line>
<line>HIS CA 6.75 3.79 </line>
<line>ARG CA 3.79 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>GLY CA 150</line>
<line>SER CA 203</line>
<line>ASP CA 218</line>
<line>ARG CA 260</line>
<line>PHE CA 359</line>
<line>GLY CA 314</line>
<line>PHE CA 364</line>
<line>VAL CA 442</line>
<line>ALA CA 355</line>
<line>GLU CA 347</line>
<line>HIS CA 449</line>
<line>ARG CA 456</line>
<line>GLY CA 513</line>
</n14>
</entryChain>
<parallel>
<x>-252.63900756835938</x>
<y>-49.08599853515625</y>
<z>22.694000244140625</z>
</parallel>
<rotation>
<x>-0.1589999943971634</x>
<y>-0.38999998569488525</y>
<z>-0.9070000052452087</z>
<x>-0.2840000092983246</x>
<y>0.8980000019073486</y>
<z>-0.335999995470047</z>
<x>0.9449999928474426</x>
<y>0.20399999618530273</y>
<z>-0.2540000081062317</z>
</rotation>
<rmsd>3.0353219509124756</rmsd>
<dmax>3.944408893585205</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2AY1</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2AY1B</entryIDChain>
<sequence>GLKSE---TTATL</sequence>
<secondary-structure>G GG---EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 3592 CA GLY B 91 126.381 30.682 7.294 1.00 28.66 C </line>
<line>ATOM 3596 CA LEU B 95 123.595 28.633 5.696 1.00 29.04 C </line>
<line>ATOM 3604 CA LYS B 96 124.124 24.935 6.431 1.00 29.64 C </line>
<line>ATOM 3613 CA SER B 97 121.463 23.278 4.289 1.00 30.00 C </line>
<line>ATOM 3619 CA GLU B 98 122.188 19.833 5.749 1.00 31.10 C </line>
<line>ATOM 3628 CA THR B 99 120.962 21.086 9.142 1.00 28.93 C </line>
<line>ATOM 3635 CA THR B 100 118.404 23.680 8.032 1.00 25.50 C </line>
<line>ATOM 3642 CA ALA B 101 114.672 23.134 7.544 1.00 22.05 C </line>
<line>ATOM 3647 CA THR B 102 112.598 25.786 5.784 1.00 19.08 C </line>
<line>ATOM 3654 CA LEU B 103 108.837 26.333 5.659 1.00 14.59 C </line>
</atom-coordinate>
<distance-map>
<line> LEU THR ALA THR THR GLU SER LYS LEU GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 18.15 14.70 13.93 10.64 11.17 11.73 9.38 6.23 3.81 </line>
<line>LEU CA 14.94 11.36 10.64 7.55 8.70 8.91 5.93 3.81 </line>
<line>LYS CA 15.37 11.58 9.69 6.07 5.67 5.50 3.80 </line>
<line>SER CA 13.06 9.33 7.53 4.85 5.35 3.81 </line>
<line>GLU CA 14.85 11.29 8.40 5.86 3.82 </line>
<line>THR CA 13.66 10.16 6.81 3.81 </line>
<line>THR CA 10.21 6.57 3.80 </line>
<line>ALA CA 6.92 3.80 </line>
<line>THR CA 3.80 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>GLY CA 271</line>
<line>LEU CA 303</line>
<line>LYS CA 279</line>
<line>SER CA 281</line>
<line>GLU CA 215</line>
<line>THR CA 273</line>
<line>THR CA 371</line>
<line>ALA CA 413</line>
<line>THR CA 475</line>
<line>LEU CA 494</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ASD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ASDA</entryIDChain>
<sequence>GSALINDKRARTA</sequence>
<secondary-structure> HHHH EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 659 CA GLY A 98 -140.226 -20.428 55.930 1.00 34.12 C </line>
<line>ATOM 663 CA SER A 99 -136.601 -19.308 55.748 1.00 24.12 C </line>
<line>ATOM 669 CA ALA A 100 -133.714 -21.712 56.228 1.00 26.46 C </line>
<line>ATOM 674 CA LEU A 101 -132.362 -19.678 59.193 1.00 25.13 C </line>
<line>ATOM 682 CA ILE A 102 -135.582 -20.223 61.071 1.00 24.36 C </line>
<line>ATOM 690 CA ASN A 103 -135.830 -23.902 60.232 1.00 29.17 C </line>
<line>ATOM 698 CA ASP A 104 -132.170 -24.778 61.000 1.00 23.83 C </line>
<line>ATOM 706 CA LYS A 105 -132.571 -22.900 64.345 1.00 21.57 C </line>
<line>ATOM 715 CA ARG A 106 -129.686 -20.641 63.325 1.00 15.03 C </line>
<line>ATOM 726 CA ALA A 107 -131.161 -17.349 64.497 1.00 15.89 C </line>
<line>ATOM 731 CA ARG A 108 -131.652 -16.091 68.151 1.00 8.64 C </line>
<line>ATOM 742 CA THR A 109 -133.409 -12.820 69.015 1.00 5.97 C </line>
<line>ATOM 749 CA ALA A 110 -133.555 -10.697 72.123 1.00 7.75 C </line>
</atom-coordinate>
<distance-map>
<line> ALA THR ARG ALA ARG LYS ASP ASN ILE LEU ALA SER GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 20.04 16.60 15.55 12.85 12.88 11.64 10.47 7.06 6.93 8.55 6.64 3.80 </line>
<line>SER CA 18.75 15.11 13.74 10.49 10.34 10.15 8.78 6.47 5.50 5.47 3.79 </line>
<line>ALA CA 19.34 15.58 13.34 9.69 8.23 8.28 5.88 5.03 5.40 3.84 </line>
<line>LEU CA 15.79 12.02 9.68 5.92 5.02 6.08 5.41 5.56 3.77 </line>
<line>ILE CA 14.73 11.07 9.09 6.29 6.33 5.19 5.69 3.78 </line>
<line>ASN CA 17.91 14.35 11.88 9.11 7.61 5.34 3.84 </line>
<line>ASP CA 18.00 14.45 11.26 8.27 5.36 3.86 </line>
<line>LYS CA 14.50 11.14 7.85 5.73 3.80 </line>
<line>ARG CA 13.83 10.36 6.92 3.79 </line>
<line>ALA CA 10.40 6.78 3.90 </line>
<line>ARG CA 6.96 3.81 </line>
<line>THR CA 3.77 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLY CA 179</line>
<line>SER CA 243</line>
<line>ALA CA 238</line>
<line>LEU CA 324</line>
<line>ILE CA 299</line>
<line>ASN CA 201</line>
<line>ASP CA 212</line>
<line>LYS CA 272</line>
<line>ARG CA 326</line>
<line>ALA CA 425</line>
<line>ARG CA 452</line>
<line>THR CA 497</line>
<line>ALA CA 491</line>
</n14>
</entryChain>
<parallel>
<x>255.3470001220703</x>
<y>43.83599853515625</y>
<z>-53.74599838256836</z>
</parallel>
<rotation>
<x>-0.17499999701976776</x>
<y>-0.8410000205039978</y>
<z>-0.5120000243186951</z>
<x>-0.7160000205039978</x>
<y>0.4659999907016754</y>
<z>-0.5199999809265137</z>
<x>-0.6759999990463257</x>
<y>-0.2750000059604645</y>
<z>0.6840000152587891</z>
</rotation>
<rmsd>2.9030909538269043</rmsd>
<dmax>6.1172871589660645</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>2AY1</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2AY1B</entryIDChain>
<sequence>ELRDL---SGSDR</sequence>
<secondary-structure>HHH --- GG</secondary-structure>
<atom-coordinate>
<line>ATOM 5399 CA GLU B 340 113.520 70.425 15.089 1.00 51.09 C </line>
<line>ATOM 5408 CA LEU B 341 112.835 69.265 18.658 1.00 54.21 C </line>
<line>ATOM 5416 CA ARG B 342 116.304 70.335 19.785 1.00 57.43 C </line>
<line>ATOM 5427 CA ASP B 343 115.994 73.801 18.234 1.00 59.49 C </line>
<line>ATOM 5435 CA LEU B 344 112.522 74.086 19.792 1.00 60.09 C </line>
<line>ATOM 5443 CA SER B 345 113.503 73.809 23.467 1.00 60.63 C </line>
<line>ATOM 5449 CA GLY B 346 117.268 73.366 23.622 1.00 60.42 C </line>
<line>ATOM 5453 CA SER B 347 116.320 70.064 25.217 1.00 59.60 C </line>
<line>ATOM 5459 CA ASP B 348 118.856 67.466 24.093 1.00 57.62 C </line>
<line>ATOM 5467 CA ARG B 349 116.536 64.939 25.796 1.00 53.83 C </line>
</atom-coordinate>
<distance-map>
<line> ARG ASP SER GLY SER LEU ASP ARG LEU GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 12.40 10.88 10.51 9.77 9.04 6.04 5.24 5.46 3.81 </line>
<line>LEU CA 9.13 8.31 7.47 7.82 6.65 4.96 5.54 3.80 </line>
<line>ARG CA 8.08 5.77 5.44 4.98 5.79 5.33 3.81 </line>
<line>ASP CA 11.66 9.09 7.93 5.55 5.80 3.82 </line>
<line>LEU CA 11.65 10.12 7.75 6.14 3.81 </line>
<line>SER CA 9.66 8.32 5.00 3.79 </line>
<line>GLY CA 8.73 6.13 3.79 </line>
<line>SER CA 5.16 3.80 </line>
<line>ASP CA 3.83 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>GLU CA 301</line>
<line>LEU CA 323</line>
<line>ARG CA 248</line>
<line>ASP CA 194</line>
<line>LEU CA 221</line>
<line>SER CA 195</line>
<line>GLY CA 150</line>
<line>SER CA 203</line>
<line>ASP CA 218</line>
<line>ARG CA 260</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ASD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ASDA</entryIDChain>
<sequence>TLQEKGANRDFSF</sequence>
<secondary-structure>HHHH GG</secondary-structure>
<atom-coordinate>
<line>ATOM 2543 CA THR A 340 -143.914 24.236 45.718 1.00 23.88 C </line>
<line>ATOM 2550 CA LEU A 341 -140.164 25.052 45.791 1.00 30.05 C </line>
<line>ATOM 2558 CA GLN A 342 -140.531 25.655 42.030 1.00 46.58 C </line>
<line>ATOM 2567 CA GLU A 343 -143.555 28.009 42.288 1.00 48.85 C </line>
<line>ATOM 2576 CA LYS A 344 -141.960 29.878 45.185 1.00 43.40 C </line>
<line>ATOM 2585 CA GLY A 345 -138.901 30.682 42.996 1.00 52.75 C </line>
<line>ATOM 2589 CA ALA A 346 -136.103 28.350 44.047 1.00 71.08 C </line>
<line>ATOM 2594 CA ASN A 347 -133.322 28.299 41.529 1.00 90.20 C </line>
<line>ATOM 2602 CA ARG A 348 -132.105 24.853 42.126 1.00 83.54 C </line>
<line>ATOM 2613 CA ASP A 349 -133.750 21.808 40.687 1.00 64.28 C </line>
<line>ATOM 2621 CA PHE A 350 -134.756 19.944 43.763 1.00 34.97 C </line>
<line>ATOM 2632 CA SER A 351 -136.128 16.974 41.794 1.00 26.53 C </line>
<line>ATOM 2638 CA PHE A 352 -133.560 14.519 43.284 1.00 22.77 C </line>
</atom-coordinate>
<distance-map>
<line> PHE SER PHE ASP ARG ASN ALA GLY LYS GLU GLN LEU THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 14.41 11.35 10.30 11.60 12.36 12.09 8.98 8.61 5.99 5.11 5.20 3.84 </line>
<line>LEU CA 12.68 9.88 7.71 8.82 8.86 8.69 5.51 6.41 5.18 5.70 3.83 </line>
<line>GLN CA 13.20 9.74 8.30 7.91 8.46 7.69 5.56 5.37 5.46 3.84 </line>
<line>GLU CA 16.82 13.31 12.03 11.71 11.88 10.27 7.66 5.41 3.80 </line>
<line>LYS CA 17.61 14.56 12.35 12.36 11.48 9.51 6.16 3.85 </line>
<line>GLY CA 17.03 14.04 11.54 10.52 9.00 6.24 3.79 </line>
<line>ALA CA 14.08 11.60 8.52 7.72 5.65 3.75 </line>
<line>ASN CA 13.89 11.67 8.77 6.56 3.70 </line>
<line>ARG CA 10.50 8.85 5.81 3.75 </line>
<line>ASP CA 7.74 5.50 3.73 </line>
<line>PHE CA 5.58 3.82 </line>
<line>SER CA 3.85 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>THR CA 291</line>
<line>LEU CA 334</line>
<line>GLN CA 245</line>
<line>GLU CA 201</line>
<line>LYS CA 220</line>
<line>GLY CA 197</line>
<line>ALA CA 255</line>
<line>ASN CA 198</line>
<line>ARG CA 238</line>
<line>ASP CA 259</line>
<line>PHE CA 342</line>
<line>SER CA 287</line>
<line>PHE CA 321</line>
</n14>
</entryChain>
<parallel>
<x>253.625</x>
<y>46.96500015258789</y>
<z>-22.965999603271484</z>
</parallel>
<rotation>
<x>-0.18400000035762787</x>
<y>0.23600000143051147</y>
<z>0.9539999961853027</z>
<x>-0.5170000195503235</x>
<y>0.8029999732971191</y>
<z>-0.2980000078678131</z>
<x>-0.8360000252723694</x>
<y>-0.5479999780654907</y>
<z>-0.026000000536441803</z>
</rotation>
<rmsd>2.8387999534606934</rmsd>
<dmax>3.982456922531128</dmax>
</indel>