NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1ASEA-1AKCA
confEVID 1ASEA-1AKCA
pdbIDA 1ASE
pdbIDB 1AKC
pdbChainA A
pdbChainB A
identity 0.399500012397766
indelSize 2
alignment <alignment>
<seq1>--MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNT-SVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL-</seq1>
<seq2>SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAHNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQVTK</seq2>
<ss_1>-- HHHHHHHHH HHHHHHHHHHHHH HHHHHHHHHHHH HHHH EEEEEEE HHHHHHHHHHHHHHH - EEEE HHHHHHH EEEEEEEEE EEEHHHHHHHGGG EEEE HHHHHHHHHHHHH EEEEEE - GGGHHHHHHH EEEEEEE EEEEEEE HHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGGGG HHHHHHHH EEEEEGG HHHHHHHHH -</ss_1>
<ss_2> HHHHHHHH HHHHHHHHHHHH HHHHHHHHHHHH HHHH EEEEEEE HHHHHHHHHHHHHHHH EEEE GGHHHHH EEEEEEEEE EEEHHHHHHHHH EEEE HHHHHHHHHHHHH EEEEEE HHHH HHHHHHHH EEEEEEE EEEEEE HHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHH HHHHHHHH EEEGG HHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1ASE</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ASEA</entryIDChain>
<sequence>LAKNT-SVKRV</sequence>
<secondary-structure>HHHH - EE</secondary-structure>
<atom-coordinate>
<line>ATOM 856 CA LEU A 126 -118.562 -7.940 70.106 1.00 6.97 C </line>
<line>ATOM 864 CA ALA A 127 -116.235 -5.917 72.365 1.00 12.93 C </line>
<line>ATOM 869 CA LYS A 128 -115.953 -8.561 75.128 1.00 2.00 C </line>
<line>ATOM 878 CA ASN A 129 -116.501 -11.793 73.050 1.00 11.59 C </line>
<line>ATOM 886 CA THR A 130 -114.806 -10.965 69.752 1.00 8.23 C </line>
<line>ATOM 893 CA SER A 131 -111.647 -9.825 68.093 1.00 23.45 C </line>
<line>ATOM 899 CA VAL A 132 -113.253 -6.746 66.604 1.00 9.44 C </line>
<line>ATOM 906 CA LYS A 133 -111.548 -3.434 67.045 1.00 7.41 C </line>
<line>ATOM 915 CA ARG A 134 -113.237 -1.598 64.210 1.00 10.13 C </line>
<line>ATOM 926 CA VAL A 135 -116.758 -0.925 63.107 1.00 5.69 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ARG LYS VAL SER THR ASN LYS ALA LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 10.07 10.17 8.88 6.47 7.44 4.84 5.27 5.69 3.82 </line>
<line>ALA CA 10.53 9.70 7.51 6.54 7.39 5.86 5.92 3.83 </line>
<line>LYS CA 14.26 13.23 10.54 9.12 8.34 6.00 3.88 </line>
<line>ASN CA 14.73 13.88 11.42 8.81 7.21 3.80 </line>
<line>THR CA 12.20 11.00 8.64 5.49 3.75 </line>
<line>SER CA 11.41 9.24 6.48 3.78 </line>
<line>VAL CA 7.64 5.68 3.75 </line>
<line>LYS CA 7.00 3.78 </line>
<line>ARG CA 3.75 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 396</line>
<line>ALA CA 295</line>
<line>LYS CA 240</line>
<line>ASN CA 247</line>
<line>THR CA 284</line>
<line>SER CA 210</line>
<line>VAL CA 304</line>
<line>LYS CA 281</line>
<line>ARG CA 360</line>
<line>VAL CA 461</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AKC</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AKCA</entryIDChain>
<sequence>LQRFFKFSRDV</sequence>
<secondary-structure>HHHH EE</secondary-structure>
<atom-coordinate>
<line>ATOM 874 CA LEU A 119 31.188 28.140 43.244 1.00 32.21 C </line>
<line>ATOM 882 CA GLN A 120 32.196 30.465 40.381 1.00 30.99 C </line>
<line>ATOM 891 CA ARG A 121 28.553 30.505 39.481 1.00 23.36 C </line>
<line>ATOM 902 CA PHE A 122 26.805 30.410 42.855 1.00 36.31 C </line>
<line>ATOM 913 CA PHE A 123 29.212 31.518 45.575 1.00 41.68 C </line>
<line>ATOM 924 CA LYS A 124 28.251 35.230 45.591 1.00 45.69 C </line>
<line>ATOM 933 CA PHE A 125 30.377 36.009 48.656 1.00 28.09 C </line>
<line>ATOM 944 CA SER A 126 33.862 35.820 47.105 1.00 39.29 C </line>
<line>ATOM 950 CA ARG A 129 36.207 34.911 44.225 1.00 30.28 C </line>
<line>ATOM 961 CA ASP A 130 39.143 33.907 46.521 1.00 39.49 C </line>
<line>ATOM 969 CA VAL A 133 40.340 30.384 47.267 1.00 17.69 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ASP ARG SER PHE LYS PHE PHE ARG GLN LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 10.25 10.36 8.49 9.00 9.58 8.03 4.56 4.95 5.17 3.82 </line>
<line>GLN CA 10.67 9.89 7.12 8.76 10.13 8.09 6.08 5.93 3.75 </line>
<line>ARG CA 14.13 13.16 10.03 10.70 10.85 7.73 6.21 3.80 </line>
<line>PHE CA 14.24 13.34 10.51 9.86 8.82 5.73 3.80 </line>
<line>PHE CA 11.31 10.26 7.89 6.52 5.57 3.83 </line>
<line>LYS CA 13.13 11.01 8.08 5.84 3.81 </line>
<line>PHE CA 11.53 9.26 7.40 3.82 </line>
<line>SER CA 8.46 5.65 3.82 </line>
<line>ARG CA 6.84 3.86 </line>
<line>ASP CA 3.79 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 422</line>
<line>GLN CA 327</line>
<line>ARG CA 285</line>
<line>PHE CA 303</line>
<line>PHE CA 334</line>
<line>LYS CA 212</line>
<line>PHE CA 235</line>
<line>SER CA 287</line>
<line>ARG CA 308</line>
<line>ASP CA 358</line>
<line>VAL CA 460</line>
</n14>
</entryChain>
<parallel>
<x>-145.86300659179688</x>
<y>-40.369998931884766</y>
<z>26.327999114990234</z>
</parallel>
<rotation>
<x>-0.0820000022649765</x>
<y>0.8740000128746033</y>
<z>-0.4790000021457672</z>
<x>0.9959999918937683</x>
<y>0.09000000357627869</y>
<z>-0.006000000052154064</z>
<x>0.03799999877810478</x>
<y>-0.47699999809265137</y>
<z>-0.878000020980835</z>
</rotation>
<rmsd>1.2026309967041016</rmsd>
<dmax>2.037585973739624</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1ASE</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1ASEA</entryIDChain>
<sequence>GFARG-LEEDA</sequence>
<secondary-structure> - GGG</secondary-structure>
<atom-coordinate>
<line>ATOM 1673 CA GLY A 228 -141.751 -0.881 55.321 1.00 6.82 C </line>
<line>ATOM 1677 CA PHE A 229 -140.971 2.707 54.332 1.00 10.93 C </line>
<line>ATOM 1688 CA ALA A 230 -138.907 2.338 51.120 1.00 18.90 C </line>
<line>ATOM 1693 CA ARG A 231 -140.873 -0.117 48.881 1.00 18.39 C </line>
<line>ATOM 1704 CA GLY A 232 -142.601 -2.434 51.416 1.00 2.61 C </line>
<line>ATOM 1708 CA LEU A 233 -141.814 -4.887 54.233 1.00 12.79 C </line>
<line>ATOM 1716 CA GLU A 234 -140.474 -7.775 52.101 1.00 7.31 C </line>
<line>ATOM 1725 CA GLU A 235 -139.051 -5.596 49.331 1.00 12.23 C </line>
<line>ATOM 1734 CA ASP A 236 -137.073 -3.731 52.004 1.00 3.00 C </line>
<line>ATOM 1742 CA ALA A 237 -135.544 -6.809 53.518 1.00 12.62 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ASP GLU GLU LEU GLY ARG ALA PHE GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 8.77 6.40 8.09 7.72 4.15 4.29 6.54 6.01 3.80 </line>
<line>PHE CA 10.98 7.88 9.88 10.73 7.64 6.13 6.14 3.84 </line>
<line>ALA CA 10.04 6.40 8.13 10.28 8.39 6.04 3.86 </line>
<line>ARG CA 9.73 6.10 5.79 8.32 7.23 3.84 </line>
<line>GLY CA 8.57 5.71 5.19 5.79 3.82 </line>
<line>LEU CA 6.60 5.36 5.67 3.83 </line>
<line>GLU CA 5.22 5.28 3.80 </line>
<line>GLU CA 5.59 3.81 </line>
<line>ASP CA 3.76 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLY CA 457</line>
<line>PHE CA 482</line>
<line>ALA CA 431</line>
<line>ARG CA 336</line>
<line>GLY CA 343</line>
<line>LEU CA 411</line>
<line>GLU CA 333</line>
<line>GLU CA 304</line>
<line>ASP CA 409</line>
<line>ALA CA 436</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1AKC</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1AKCA</entryIDChain>
<sequence>GFASGDINRDA</sequence>
<secondary-structure> HHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 1723 CA GLY A 227 42.512 5.228 53.916 1.00 29.62 C </line>
<line>ATOM 1727 CA PHE A 228 46.142 6.166 53.144 1.00 29.85 C </line>
<line>ATOM 1738 CA ALA A 229 46.829 8.358 56.070 1.00 35.20 C </line>
<line>ATOM 1743 CA SER A 230 46.258 5.841 58.909 1.00 41.28 C </line>
<line>ATOM 1749 CA GLY A 231 45.183 2.782 56.938 1.00 36.97 C </line>
<line>ATOM 1753 CA ASP A 232 41.727 3.204 58.429 1.00 29.31 C </line>
<line>ATOM 1761 CA ILE A 233 38.976 4.871 56.390 1.00 38.70 C </line>
<line>ATOM 1769 CA ASN A 234 36.814 6.222 59.251 1.00 22.93 C </line>
<line>ATOM 1777 CA ARG A 235 39.879 7.446 61.045 1.00 41.99 C </line>
<line>ATOM 1788 CA ASP A 236 40.959 9.330 57.888 1.00 28.35 C </line>
<line>ATOM 1796 CA ALA A 237 37.534 10.982 57.526 1.00 21.97 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ASP ARG ASN ILE ASP GLY SER ALA PHE GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 8.42 5.92 7.92 7.87 4.33 5.01 4.72 6.27 5.75 3.83 </line>
<line>PHE CA 10.79 7.71 10.16 11.15 7.97 7.50 5.17 5.78 3.72 </line>
<line>ALA CA 9.77 6.22 8.60 10.72 8.60 7.63 5.88 3.84 </line>
<line>SER CA 10.22 6.43 6.92 9.46 7.77 5.26 3.79 </line>
<line>GLY CA 11.23 7.85 8.17 9.34 6.57 3.79 </line>
<line>ASP CA 8.88 6.20 5.32 5.82 3.81 </line>
<line>ILE CA 6.38 5.10 5.40 3.83 </line>
<line>ASN CA 5.11 5.36 3.76 </line>
<line>ARG CA 5.51 3.83 </line>
<line>ASP CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLY CA 448</line>
<line>PHE CA 479</line>
<line>ALA CA 448</line>
<line>SER CA 350</line>
<line>GLY CA 335</line>
<line>ASP CA 317</line>
<line>ILE CA 410</line>
<line>ASN CA 341</line>
<line>ARG CA 312</line>
<line>ASP CA 412</line>
<line>ALA CA 448</line>
</n14>
</entryChain>
<parallel>
<x>-183.62899780273438</x>
<y>-7.945000171661377</y>
<z>-4.866000175476074</z>
</parallel>
<rotation>
<x>-0.09000000357627869</x>
<y>0.9070000052452087</y>
<z>-0.41200000047683716</z>
<x>0.9950000047683716</x>
<y>0.10300000011920929</y>
<z>0.008999999612569809</z>
<x>0.050999999046325684</x>
<y>-0.4090000092983246</y>
<z>-0.9110000133514404</z>
</rotation>
<rmsd>1.097957968711853</rmsd>
<dmax>2.657090902328491</dmax>
</indel>