NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AVSB-2CTNA
confEVID 1AVSB-2CTNA
pdbIDA 1AVS
pdbIDB 2CTN
pdbChainA B
pdbChainB A
identity 0.654799997806549
indelSize 1
alignment <alignment>
<seq1>-QQAEAR-AFLSEEMIAEFKAAFDMFDAD-GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---</seq1>
<seq2>ADIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS</seq2>
<ss_1>- HHHH- HHHHHHHHHHHHHH - EEE HHHHHHHHHH HHHHHHHHH EEEHHHHHHHHHH ---</ss_1>
<ss_2> HHHHHGGG HHHHHHHHHHHHHHH HHHHHHHH HHHHHHHHH HHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AVS</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1AVSB</entryIDChain>
<sequence>MFDAD-GGGDI</sequence>
<secondary-structure>HH - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 805 CA MET B 28 -13.035 22.294 40.719 1.00 40.86 C </line>
<line>ATOM 813 CA PHE B 29 -9.734 24.194 40.978 1.00 27.60 C </line>
<line>ATOM 824 CA ASP B 30 -11.183 27.337 39.520 1.00 19.79 C </line>
<line>ATOM 832 CA ALA B 31 -13.109 28.164 42.661 1.00 26.62 C </line>
<line>ATOM 837 CA ASP B 32 -14.257 31.558 41.507 1.00 20.22 C </line>
<line>ATOM 845 CA GLY B 33 -15.191 30.274 38.061 1.00 23.32 C </line>
<line>ATOM 849 CA GLY B 34 -13.375 33.168 36.208 1.00 16.85 C </line>
<line>ATOM 853 CA GLY B 35 -11.499 30.879 33.841 1.00 17.94 C </line>
<line>ATOM 857 CA ASP B 36 -7.992 30.594 35.320 1.00 18.29 C </line>
<line>ATOM 865 CA ILE B 37 -6.372 29.121 38.399 1.00 17.10 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ASP GLY GLY GLY ASP ALA ASP PHE MET </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>MET CA 9.82 11.11 11.11 11.78 8.68 9.38 6.18 5.50 3.82 </line>
<line>PHE CA 6.50 8.72 9.94 10.80 8.67 8.66 5.48 3.76 </line>
<line>ASP CA 5.25 6.20 6.70 7.06 5.18 5.59 3.78 </line>
<line>ALA CA 8.03 9.27 9.37 8.17 5.47 3.76 </line>
<line>ASP CA 8.82 8.86 8.18 5.61 3.79 </line>
<line>GLY CA 8.90 7.71 5.64 3.89 </line>
<line>GLY CA 8.38 6.03 3.79 </line>
<line>GLY CA 7.08 3.82 </line>
<line>ASP CA 3.78 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>MET CA 252</line>
<line>PHE CA 313</line>
<line>ASP CA 268</line>
<line>ALA CA 214</line>
<line>ASP CA 168</line>
<line>GLY CA 181</line>
<line>GLY CA 175</line>
<line>GLY CA 240</line>
<line>ASP CA 309</line>
<line>ILE CA 360</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2CTN</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2CTNA</entryIDChain>
<sequence>IFVLGAEDGSI</sequence>
<secondary-structure>HHH </secondary-structure>
<atom-coordinate>
<line>ATOM 378 CA ILE A 26 61.411 -8.917 -7.203 1.00 0.63 C </line>
<line>ATOM 397 CA PHE A 27 62.093 -8.955 -3.442 1.00 0.79 C </line>
<line>ATOM 417 CA VAL A 28 58.870 -7.083 -2.600 1.00 0.65 C </line>
<line>ATOM 433 CA LEU A 29 56.870 -10.105 -3.836 1.00 0.99 C </line>
<line>ATOM 452 CA GLY A 30 54.708 -10.719 -0.744 1.00 1.58 C </line>
<line>ATOM 459 CA ALA A 31 57.073 -8.423 1.198 1.00 0.95 C </line>
<line>ATOM 469 CA GLU A 32 55.783 -7.146 4.565 1.00 1.90 C </line>
<line>ATOM 484 CA ASP A 33 54.186 -4.106 2.880 1.00 2.11 C </line>
<line>ATOM 496 CA GLY A 34 54.989 -3.690 -0.839 1.00 1.40 C </line>
<line>ATOM 503 CA SER A 35 58.518 -2.823 0.348 1.00 0.70 C </line>
<line>ATOM 514 CA ILE A 36 61.736 -4.292 1.804 1.00 0.78 C </line>
</atom-coordinate>
<distance-map>
<line> ILE SER GLY ASP GLU ALA GLY LEU VAL PHE ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 10.13 10.13 10.44 13.30 13.16 9.47 9.48 5.78 5.57 3.82 </line>
<line>PHE CA 7.03 8.05 9.22 11.23 10.35 6.86 8.06 5.36 3.82 </line>
<line>VAL CA 5.95 5.19 5.45 7.80 7.80 4.41 5.83 3.83 </line>
<line>LEU CA 9.45 8.56 7.33 9.40 8.97 5.31 3.82 </line>
<line>GLY CA 9.86 8.83 7.04 7.56 6.49 3.83 </line>
<line>ALA CA 6.26 5.85 5.56 5.46 3.83 </line>
<line>GLU CA 7.16 6.63 6.46 3.83 </line>
<line>ASP CA 7.63 5.18 3.83 </line>
<line>GLY CA 7.27 3.82 </line>
<line>SER CA 3.83 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ILE CA 435</line>
<line>PHE CA 528</line>
<line>VAL CA 496</line>
<line>LEU CA 339</line>
<line>GLY CA 281</line>
<line>ALA CA 417</line>
<line>GLU CA 376</line>
<line>ASP CA 358</line>
<line>GLY CA 393</line>
<line>SER CA 579</line>
<line>ILE CA 704</line>
</n14>
</entryChain>
<parallel>
<x>-70.03700256347656</x>
<y>36.07400131225586</y>
<z>40.5890007019043</z>
</parallel>
<rotation>
<x>-0.3009999990463257</x>
<y>-0.9330000281333923</y>
<z>-0.1979999989271164</z>
<x>0.46700000762939453</x>
<y>0.03700000047683716</y>
<z>-0.8840000033378601</z>
<x>-0.8309999704360962</x>
<y>0.35899999737739563</y>
<z>-0.42399999499320984</z>
</rotation>
<rmsd>2.3761160373687744</rmsd>
<dmax>3.600677967071533</dmax>
</indel>