NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AYM2-1PVC2
confEVID 1AYM2-1PVC2
pdbIDA 1AYM
pdbIDB 1PVC
pdbChainA 2
pdbChainB 2
identity 0.515399992465973
indelSize 1
alignment <alignment>
<seq1>----SDRIIQITRGDSTITSQDVANAVVGYGVWPHYLTPQDATAIDKPTQPDTSSNRFYTLDSKMWNSTSKGWWWKLPDALKDMGIFGENMFYHFLGRSGYTVHVQCNASKFHQGTLLVVMIPEHQLATVNKGNVNAGYKYTHPGEAGREV-------GTQVENEKQPSDDNWLNFDGTLLGNLLIFPHQFINLRSNNSATLIVPYVNAVPMDSMVRHNNWSLVIIPVCQLQS-NNISNIVPITVSISPMCAEFSGARAKTVVQ--</seq1>
<seq2>ACGYSDRVLQLTLGNSTITTQEAANSVVAYGRWPEFIRDDEANPVDQPTEPDVATCRFYTLDTVMWGKESKGWWWKLPDALRDMGLFGQNMYYHYLGRSGYTVHVQCNASKFHQGALGVFAIPEYCLAGDSDKQRYTSYANANPGERGGKFYSQFNKDNAVTSPKREFCPVDYLLGCGVLLGNAFVYPHQIINLRTNNSATIVLPYVNALAIDSMVKHNNWGIAILPLSPLDFAQDSSVEIPITVTIAPMCSEFNGLRNVTAPKFQ</seq2>
<ss_1>---- EEEEE EEEEE EEGGG EEE EEEEEE HHHHHHHHH EEEEEEEEEEE EEEEEEEEEEEE HHHH EEE------- GGGGGG EEEEHHHHEEEEEEE EEEEEEE - EEEEEEEEEE EEE --</ss_1>
<ss_2> EEEEE EEEEE EEGGG HHHH EEEE EEEEEE HHHHHHHHH EEEEEEEEEEE EEEEEEEEEEEEE HHHH GGGGGG EEEE EEEEEEE HHHH EEEEEEE EE EEEEEEEEEEEE EEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AYM</pdbID>
<pdbChain>2</pdbChain>
<entryIDChain>1AYM2</entryIDChain>
<sequence>CQLQS-NNISN</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 4082 CA CYS 2 227 17.388 37.682 133.949 1.00 10.69 C </line>
<line>ATOM 4088 CA GLN 2 228 15.703 38.055 137.321 1.00 14.03 C </line>
<line>ATOM 4097 CA LEU 2 229 11.906 38.251 137.544 1.00 10.08 C </line>
<line>ATOM 4105 CA GLN 2 230 10.998 41.855 138.385 1.00 11.18 C </line>
<line>ATOM 4114 CA SER 2 231 7.782 43.885 138.563 1.00 13.43 C </line>
<line>ATOM 4120 CA ASN 2 232 5.921 46.332 140.796 1.00 16.41 C </line>
<line>ATOM 4128 CA ASN 2 233 3.285 43.703 141.677 1.00 15.39 C </line>
<line>ATOM 4136 CA ILE 2 234 5.364 41.001 143.361 1.00 19.22 C </line>
<line>ATOM 4144 CA SER 2 235 2.460 39.483 145.311 1.00 17.84 C </line>
<line>ATOM 4150 CA ASN 2 236 1.093 37.995 142.073 1.00 12.23 C </line>
</atom-coordinate>
<distance-map>
<line> ASN SER ILE ASN ASN SER GLN LEU GLN CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 18.21 18.85 15.63 17.17 15.91 12.33 8.83 6.58 3.79 </line>
<line>GLN CA 15.36 15.53 12.33 14.32 13.28 9.91 6.14 3.81 </line>
<line>LEU CA 11.73 12.29 9.18 11.01 10.57 7.06 3.81 </line>
<line>GLN CA 11.25 11.25 7.57 8.59 7.19 3.81 </line>
<line>SER CA 9.58 9.66 6.10 5.47 3.80 </line>
<line>ASN CA 9.72 8.90 5.94 3.83 </line>
<line>ASN CA 6.13 5.63 3.80 </line>
<line>ILE CA 5.38 3.81 </line>
<line>SER CA 3.82 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>CYS CA 281</line>
<line>GLN CA 278</line>
<line>LEU CA 334</line>
<line>GLN CA 265</line>
<line>SER CA 215</line>
<line>ASN CA 145</line>
<line>ASN CA 163</line>
<line>ILE CA 194</line>
<line>SER CA 145</line>
<line>ASN CA 176</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1PVC</pdbID>
<pdbChain>2</pdbChain>
<entryIDChain>1PVC2</entryIDChain>
<sequence>SPLDFAQDSSV</sequence>
<secondary-structure> EE E</secondary-structure>
<atom-coordinate>
<line>ATOM 4047 CA SER 2 234 40.988 19.885 132.764 1.00 8.19 C </line>
<line>ATOM 4053 CA PRO 2 235 44.200 20.071 134.876 1.00 9.18 C </line>
<line>ATOM 4060 CA LEU 2 236 47.249 17.873 134.444 1.00 8.64 C </line>
<line>ATOM 4068 CA ASP 2 237 47.402 14.738 136.531 1.00 14.41 C </line>
<line>ATOM 4076 CA PHE 2 238 49.543 11.647 136.694 1.00 15.25 C </line>
<line>ATOM 4087 CA ALA 2 239 49.731 8.421 138.716 1.00 31.14 C </line>
<line>ATOM 4092 CA GLN 2 240 49.386 9.874 142.209 1.00 44.71 C </line>
<line>ATOM 4101 CA ASP 2 241 52.251 12.379 141.998 1.00 49.76 C </line>
<line>ATOM 4109 CA SER 2 242 51.510 15.884 143.013 1.00 49.56 C </line>
<line>ATOM 4115 CA SER 2 243 54.131 17.663 140.801 1.00 41.31 C </line>
<line>ATOM 4121 CA VAL 2 244 53.909 16.277 137.325 1.00 26.21 C </line>
</atom-coordinate>
<distance-map>
<line> VAL SER SER ASP GLN ALA PHE ASP LEU PRO SER </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 14.17 15.56 15.22 16.38 16.12 15.60 12.51 9.05 6.79 3.85 </line>
<line>PRO CA 10.71 11.81 11.71 13.22 13.59 13.46 10.14 6.44 3.78 </line>
<line>LEU CA 7.43 9.37 9.77 10.60 11.35 10.67 7.01 3.77 </line>
<line>ASP CA 6.73 8.49 7.76 7.68 7.74 7.08 3.76 </line>
<line>PHE CA 6.40 8.61 7.86 6.00 5.80 3.81 </line>
<line>ALA CA 9.01 10.45 8.79 5.73 3.80 </line>
<line>GLN CA 9.24 9.23 6.42 3.81 </line>
<line>ASP CA 6.31 5.73 3.72 </line>
<line>SER CA 6.19 3.86 </line>
<line>SER CA 3.75 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>SER CA 287</line>
<line>PRO CA 318</line>
<line>LEU CA 338</line>
<line>ASP CA 271</line>
<line>PHE CA 222</line>
<line>ALA CA 156</line>
<line>GLN CA 128</line>
<line>ASP CA 147</line>
<line>SER CA 154</line>
<line>SER CA 174</line>
<line>VAL CA 231</line>
</n14>
</entryChain>
<parallel>
<x>-38.02299880981445</x>
<y>26.052000045776367</y>
<z>1.1330000162124634</z>
</parallel>
<rotation>
<x>-0.9409999847412109</x>
<y>-0.3370000123977661</y>
<z>-0.02199999988079071</z>
<x>0.3190000057220459</x>
<y>-0.9089999794960022</y>
<z>0.26899999380111694</z>
<x>-0.11100000143051147</x>
<y>0.2460000067949295</y>
<z>0.9629999995231628</z>
</rotation>
<rmsd>1.2892980575561523</rmsd>
<dmax>1.8344449996948242</dmax>
</indel>