NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1AYN2-1PVC2
confEVID 1AYN2-1PVC2
pdbIDA 1AYN
pdbIDB 1PVC
pdbChainA 2
pdbChainB 2
identity 0.515399992465973
indelSize 1
alignment <alignment>
<seq1>----SDRIIQITRGDSTITSQDVANAVVGYGVWPHYLTPQDATAIDKPTQPDTSSNRFYTLDSKMWNSTSKGWWWKLPDALKDMGIFGENMFYHFLGRSGYTVHVQCNASKFHQGTLLVVMIPEHQLATVNKGNVNAGYKYTHPGEAGREV-------GTQVENEKQPSDDNWLNFDGTLLGNLLIFPHQFINLRSNNSATLIVPYVNAVPMDSMVRHNNWSLVIIPVCQLQS-NNISNIVPITVSISPMCAEFSGARAKTVVQ--</seq1>
<seq2>ACGYSDRVLQLTLGNSTITTQEAANSVVAYGRWPEFIRDDEANPVDQPTEPDVATCRFYTLDTVMWGKESKGWWWKLPDALRDMGLFGQNMYYHYLGRSGYTVHVQCNASKFHQGALGVFAIPEYCLAGDSDKQRYTSYANANPGERGGKFYSQFNKDNAVTSPKREFCPVDYLLGCGVLLGNAFVYPHQIINLRTNNSATIVLPYVNALAIDSMVKHNNWGIAILPLSPLDFAQDSSVEIPITVTIAPMCSEFNGLRNVTAPKFQ</seq2>
<ss_1>---- EEEEE EEEEE EEGGG HHHH EEE EEEEEE HHHHHHHHH EEEEEEEEEEE EEEEEEEEEEE HHHH EEE------- GGGGGG EEEE EEEEEEE EEEEEEE - EEEEEEEEEE EEE --</ss_1>
<ss_2> EEEEE EEEEE EEGGG HHHH EEEE EEEEEE HHHHHHHHH EEEEEEEEEEE EEEEEEEEEEEEE HHHH GGGGGG EEEE EEEEEEE HHHH EEEEEEE EE EEEEEEEEEEEE EEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1AYN</pdbID>
<pdbChain>2</pdbChain>
<entryIDChain>1AYN2</entryIDChain>
<sequence>CQLQS-NNISN</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 4011 CA CYS 2 227 17.365 37.582 134.074 1.00 2.17 C </line>
<line>ATOM 4017 CA GLN 2 228 15.694 38.008 137.436 1.00 8.48 C </line>
<line>ATOM 4026 CA LEU 2 229 11.897 38.277 137.592 1.00 2.62 C </line>
<line>ATOM 4034 CA GLN 2 230 10.959 41.873 138.378 1.00 5.57 C </line>
<line>ATOM 4043 CA SER 2 231 7.715 43.865 138.545 1.00 3.85 C </line>
<line>ATOM 4049 CA ASN 2 232 5.867 46.294 140.773 1.00 10.90 C </line>
<line>ATOM 4057 CA ASN 2 233 3.280 43.649 141.627 1.00 13.13 C </line>
<line>ATOM 4065 CA ILE 2 234 5.296 40.943 143.355 1.00 16.73 C </line>
<line>ATOM 4073 CA SER 2 235 2.381 39.494 145.307 1.00 16.03 C </line>
<line>ATOM 4079 CA ASN 2 236 1.019 37.997 142.091 1.00 6.46 C </line>
</atom-coordinate>
<distance-map>
<line> ASN SER ILE ASN ASN SER GLN LEU GLN CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 18.21 18.82 15.59 17.10 15.91 12.35 8.83 6.54 3.78 </line>
<line>GLN CA 15.40 15.54 12.32 14.27 13.28 9.96 6.18 3.81 </line>
<line>LEU CA 11.77 12.31 9.16 10.93 10.52 7.04 3.80 </line>
<line>GLN CA 11.30 11.28 7.60 8.53 7.16 3.81 </line>
<line>SER CA 9.58 9.66 6.13 5.41 3.78 </line>
<line>ASN CA 9.70 8.89 5.97 3.80 </line>
<line>ASN CA 6.11 5.62 3.79 </line>
<line>ILE CA 5.35 3.80 </line>
<line>SER CA 3.80 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>CYS CA 279</line>
<line>GLN CA 278</line>
<line>LEU CA 335</line>
<line>GLN CA 266</line>
<line>SER CA 214</line>
<line>ASN CA 143</line>
<line>ASN CA 166</line>
<line>ILE CA 194</line>
<line>SER CA 146</line>
<line>ASN CA 177</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1PVC</pdbID>
<pdbChain>2</pdbChain>
<entryIDChain>1PVC2</entryIDChain>
<sequence>SPLDFAQDSSV</sequence>
<secondary-structure> EE E</secondary-structure>
<atom-coordinate>
<line>ATOM 4047 CA SER 2 234 40.988 19.885 132.764 1.00 8.19 C </line>
<line>ATOM 4053 CA PRO 2 235 44.200 20.071 134.876 1.00 9.18 C </line>
<line>ATOM 4060 CA LEU 2 236 47.249 17.873 134.444 1.00 8.64 C </line>
<line>ATOM 4068 CA ASP 2 237 47.402 14.738 136.531 1.00 14.41 C </line>
<line>ATOM 4076 CA PHE 2 238 49.543 11.647 136.694 1.00 15.25 C </line>
<line>ATOM 4087 CA ALA 2 239 49.731 8.421 138.716 1.00 31.14 C </line>
<line>ATOM 4092 CA GLN 2 240 49.386 9.874 142.209 1.00 44.71 C </line>
<line>ATOM 4101 CA ASP 2 241 52.251 12.379 141.998 1.00 49.76 C </line>
<line>ATOM 4109 CA SER 2 242 51.510 15.884 143.013 1.00 49.56 C </line>
<line>ATOM 4115 CA SER 2 243 54.131 17.663 140.801 1.00 41.31 C </line>
<line>ATOM 4121 CA VAL 2 244 53.909 16.277 137.325 1.00 26.21 C </line>
</atom-coordinate>
<distance-map>
<line> VAL SER SER ASP GLN ALA PHE ASP LEU PRO SER </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>SER CA 14.17 15.56 15.22 16.38 16.12 15.60 12.51 9.05 6.79 3.85 </line>
<line>PRO CA 10.71 11.81 11.71 13.22 13.59 13.46 10.14 6.44 3.78 </line>
<line>LEU CA 7.43 9.37 9.77 10.60 11.35 10.67 7.01 3.77 </line>
<line>ASP CA 6.73 8.49 7.76 7.68 7.74 7.08 3.76 </line>
<line>PHE CA 6.40 8.61 7.86 6.00 5.80 3.81 </line>
<line>ALA CA 9.01 10.45 8.79 5.73 3.80 </line>
<line>GLN CA 9.24 9.23 6.42 3.81 </line>
<line>ASP CA 6.31 5.73 3.72 </line>
<line>SER CA 6.19 3.86 </line>
<line>SER CA 3.75 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>SER CA 287</line>
<line>PRO CA 318</line>
<line>LEU CA 338</line>
<line>ASP CA 271</line>
<line>PHE CA 222</line>
<line>ALA CA 156</line>
<line>GLN CA 128</line>
<line>ASP CA 147</line>
<line>SER CA 154</line>
<line>SER CA 174</line>
<line>VAL CA 231</line>
</n14>
</entryChain>
<parallel>
<x>-38.05699920654297</x>
<y>26.017000198364258</y>
<z>1.156000018119812</z>
</parallel>
<rotation>
<x>-0.9419999718666077</x>
<y>-0.33500000834465027</y>
<z>-0.032999999821186066</z>
<x>0.3140000104904175</x>
<y>-0.9100000262260437</y>
<z>0.2709999978542328</z>
<x>-0.12099999934434891</x>
<y>0.24500000476837158</y>
<z>0.9620000123977661</z>
</rotation>
<rmsd>1.2775670289993286</rmsd>
<dmax>1.8459199666976929</dmax>
</indel>