NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1B06A-1UNFX
confEVID 1B06A-1UNFX
pdbIDA 1B06
pdbIDB 1UNF
pdbChainA A
pdbChainB X
identity 0.26129999756813
indelSize 3
alignment <alignment>
<seq1>VIQLKRYEFPQLPYKVDALEPYISKDIIDVHYNGHHKGYVNGANSLL-------DRLEKLIKGDLPQGQYDLQGILRGLTFNINGHKLHAIYWNNMAPAGKGGGKPGGALADLIDKQYGSFDRFKQVFSESANSLPGSGWTVLYYDNES------GNLQIMTVENHFMNH-IAELPVILIVDEFEHAYYLQYKNKRGDYLNAWWNV-VNWDDAEKRLQKYLNK--</seq1>
<seq2>-KVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHRTYVENLKKQVTELDGKSLEEIIVTAY--------NKGDILPAFNNAAQVWNHDFFWECMKP--GGGGKPSGELLELIERDFGSFEKFLDEFKAAAATQFGSGWAWLAYKASKLDADEDNKLVVIKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALSA</seq2>
<ss_1> HHHHHHIIIIHHHHHHHHHHHHH-------HHHHHHH HHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHH EEEEEEEEE ------ EEEEEEEE - EEE HHHH HHHHHHHGGGG-EEHHHHHHHHH --</ss_1>
<ss_2>- HHHHHHIIIIHHHHHHHHHHHH HHHHHHHH --------GGG HHHHHHHHHHHHHHH -- HHHHHHHHHHH HHHHHHHHHHHHHH EEEEEEEEEEGGG EEEEEEE EEE EEE HHHH HHHHHHHHHH EEHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1B06</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B06A</entryIDChain>
<sequence>HFMNH-IAELP</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 1203 CA HIS A 155 72.344 43.627 40.091 1.00 11.63 C </line>
<line>ATOM 1213 CA PHE A 156 74.136 43.427 43.435 1.00 12.26 C </line>
<line>ATOM 1224 CA MET A 157 76.514 46.318 44.061 1.00 13.69 C </line>
<line>ATOM 1232 CA ASN A 158 75.640 49.458 46.076 1.00 12.61 C </line>
<line>ATOM 1240 CA HIS A 159 72.342 48.382 47.641 1.00 8.01 C </line>
<line>ATOM 1250 CA ILE A 160 71.661 49.884 51.044 1.00 12.95 C </line>
<line>ATOM 1258 CA ALA A 161 70.857 46.941 53.341 1.00 14.00 C </line>
<line>ATOM 1263 CA GLU A 162 67.202 46.275 54.208 1.00 14.36 C </line>
<line>ATOM 1272 CA LEU A 163 65.750 49.389 52.557 1.00 15.39 C </line>
<line>ATOM 1280 CA PRO A 164 62.635 48.936 50.352 1.00 16.47 C </line>
</atom-coordinate>
<distance-map>
<line> PRO LEU GLU ALA ILE HIS ASN MET PHE HIS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>HIS CA 15.09 15.23 15.26 13.74 12.63 8.92 8.98 6.36 3.80 </line>
<line>PHE CA 14.51 13.75 13.12 11.01 10.28 6.74 6.75 3.80 </line>
<line>MET CA 15.46 14.05 13.77 10.89 9.22 5.87 3.83 </line>
<line>ASN CA 13.70 11.82 12.14 9.05 6.38 3.81 </line>
<line>HIS CA 10.09 8.28 8.60 6.06 3.78 </line>
<line>ILE CA 9.10 6.12 6.55 3.82 </line>
<line>ALA CA 8.97 5.72 3.82 </line>
<line>GLU CA 6.54 3.81 </line>
<line>LEU CA 3.84 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>HIS CA 414</line>
<line>PHE CA 337</line>
<line>MET CA 283</line>
<line>ASN CA 275</line>
<line>HIS CA 308</line>
<line>ILE CA 264</line>
<line>ALA CA 210</line>
<line>GLU CA 220</line>
<line>LEU CA 299</line>
<line>PRO CA 362</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>AVNPLVWGGYY</sequence>
<secondary-structure> EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1230 CA ALA X 179 -30.295 43.150 46.526 1.00 14.43 C </line>
<line>ATOM 1235 CA VAL X 180 -27.930 46.119 46.304 1.00 13.98 C </line>
<line>ATOM 1242 CA ASN X 181 -24.968 45.775 43.942 1.00 16.00 C </line>
<line>ATOM 1250 CA PRO X 182 -22.121 48.030 42.868 1.00 20.09 C </line>
<line>ATOM 1257 CA LEU X 183 -23.965 48.929 39.642 1.00 24.72 C </line>
<line>ATOM 1265 CA VAL X 184 -26.108 51.376 41.587 1.00 25.46 C </line>
<line>ATOM 1272 CA TRP X 185 -23.210 53.455 42.917 1.00 35.23 C </line>
<line>ATOM 1286 CA GLY X 186 -21.513 53.732 40.322 1.00 32.56 C </line>
<line>ATOM 1290 CA GLY X 187 -17.970 54.182 39.155 1.00 23.50 C </line>
<line>ATOM 1294 CA TYR X 188 -17.648 50.544 40.303 1.00 21.14 C </line>
<line>ATOM 1306 CA TYR X 189 -17.261 47.480 38.132 1.00 17.99 C </line>
</atom-coordinate>
<distance-map>
<line> TYR TYR GLY GLY TRP VAL LEU PRO ASN VAL ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 16.10 15.92 18.11 15.09 13.02 10.47 10.99 10.20 6.48 3.80 </line>
<line>VAL CA 13.51 12.70 14.67 11.62 9.36 7.29 8.25 7.01 3.80 </line>
<line>ASN CA 9.80 9.46 11.94 9.40 7.95 6.18 5.43 3.79 </line>
<line>PRO CA 6.81 5.74 8.30 6.27 5.53 5.36 3.82 </line>
<line>LEU CA 7.02 6.55 7.99 5.44 5.64 3.79 </line>
<line>VAL CA 10.27 8.60 8.95 5.32 3.81 </line>
<line>TRP CA 9.69 6.80 6.49 3.11 </line>
<line>GLY CA 7.87 5.01 3.76 </line>
<line>GLY CA 6.82 3.83 </line>
<line>TYR CA 3.78 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ALA CA 474</line>
<line>VAL CA 453</line>
<line>ASN CA 497</line>
<line>PRO CA 452</line>
<line>LEU CA 448</line>
<line>VAL CA 384</line>
<line>TRP CA 316</line>
<line>GLY CA 327</line>
<line>GLY CA 304</line>
<line>TYR CA 396</line>
<line>TYR CA 434</line>
</n14>
</entryChain>
<parallel>
<x>96.58399963378906</x>
<y>-2.381999969482422</y>
<z>4.7779998779296875</z>
</parallel>
<rotation>
<x>0.5460000038146973</x>
<y>0.421999990940094</y>
<z>0.7239999771118164</z>
<x>-0.5759999752044678</x>
<y>-0.4390000104904175</y>
<z>0.6899999976158142</z>
<x>0.6079999804496765</x>
<y>-0.7940000295639038</y>
<z>0.004000000189989805</z>
</rotation>
<rmsd>3.127516031265259</rmsd>
<dmax>5.276762008666992</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1B06</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B06A</entryIDChain>
<sequence>AWWNV-VNWDD</sequence>
<secondary-structure>HGGGG-EEHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1507 CA ALA A 190 60.888 57.901 27.609 1.00 15.33 C </line>
<line>ATOM 1512 CA TRP A 191 60.706 55.766 30.763 1.00 12.82 C </line>
<line>ATOM 1526 CA TRP A 192 59.141 58.634 32.751 1.00 15.95 C </line>
<line>ATOM 1540 CA ASN A 193 56.027 58.203 30.583 1.00 17.82 C </line>
<line>ATOM 1548 CA VAL A 194 55.340 54.665 31.820 1.00 19.41 C </line>
<line>ATOM 1555 CA VAL A 195 56.220 54.996 35.497 1.00 17.59 C </line>
<line>ATOM 1562 CA ASN A 196 53.511 53.493 37.705 1.00 16.84 C </line>
<line>ATOM 1570 CA TRP A 197 53.144 56.044 40.490 1.00 18.30 C </line>
<line>ATOM 1584 CA ASP A 198 50.287 54.081 42.068 1.00 23.41 C </line>
<line>ATOM 1592 CA ASP A 199 52.599 51.121 42.569 1.00 16.68 C </line>
</atom-coordinate>
<distance-map>
<line> ASP ASP TRP ASN VAL VAL ASN TRP TRP ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 18.40 18.33 15.14 13.26 9.62 7.68 5.71 5.48 3.81 </line>
<line>TRP CA 15.06 15.47 12.32 10.25 6.57 5.58 5.28 3.82 </line>
<line>TRP CA 13.99 13.64 10.13 9.09 5.41 5.57 3.82 </line>
<line>ASN CA 14.34 13.48 10.54 8.90 5.87 3.81 </line>
<line>VAL CA 11.65 11.44 9.05 6.27 3.80 </line>
<line>VAL CA 8.84 8.90 5.96 3.80 </line>
<line>ASN CA 5.49 5.46 3.79 </line>
<line>TRP CA 5.37 3.81 </line>
<line>ASP CA 3.79 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>ALA CA 355</line>
<line>TRP CA 474</line>
<line>TRP CA 436</line>
<line>ASN CA 335</line>
<line>VAL CA 408</line>
<line>VAL CA 465</line>
<line>ASN CA 399</line>
<line>TRP CA 383</line>
<line>ASP CA 305</line>
<line>ASP CA 355</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>VFMDKLVSWDA</sequence>
<secondary-structure>HHHH EEHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1540 CA VAL X 215 -14.909 27.036 51.212 1.00 17.49 C </line>
<line>ATOM 1547 CA PHE X 216 -16.268 29.339 48.506 1.00 15.04 C </line>
<line>ATOM 1558 CA MET X 217 -12.868 30.958 48.200 1.00 14.94 C </line>
<line>ATOM 1566 CA ASP X 218 -10.887 27.728 48.634 1.00 16.85 C </line>
<line>ATOM 1574 CA LYS X 219 -12.870 25.528 46.245 1.00 17.80 C </line>
<line>ATOM 1583 CA LEU X 220 -15.500 27.385 44.197 1.00 17.00 C </line>
<line>ATOM 1591 CA VAL X 221 -14.281 30.783 42.978 1.00 15.88 C </line>
<line>ATOM 1598 CA SER X 222 -13.480 31.028 39.279 1.00 17.21 C </line>
<line>ATOM 1604 CA TRP X 223 -10.506 33.343 39.005 1.00 17.98 C </line>
<line>ATOM 1618 CA ASP X 224 -10.806 33.052 35.208 1.00 18.69 C </line>
<line>ATOM 1626 CA ALA X 225 -14.212 34.695 35.498 1.00 15.47 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ASP TRP SER VAL LEU LYS ASP MET PHE VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 17.50 17.58 14.43 12.66 9.07 7.05 5.58 4.83 5.35 3.80 </line>
<line>PHE CA 14.22 14.85 11.81 9.79 6.05 4.79 5.58 5.62 3.78 </line>
<line>MET CA 13.31 13.32 9.79 8.94 5.41 5.98 5.77 3.81 </line>
<line>ASP CA 15.24 14.44 11.15 10.25 7.27 6.41 3.81 </line>
<line>LYS CA 14.19 13.52 10.91 8.90 6.35 3.82 </line>
<line>LEU CA 11.44 11.62 9.35 6.45 3.81 </line>
<line>VAL CA 8.44 8.81 6.05 3.79 </line>
<line>SER CA 5.32 5.27 3.78 </line>
<line>TRP CA 5.28 3.82 </line>
<line>ASP CA 3.79 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>VAL CA 359</line>
<line>PHE CA 484</line>
<line>MET CA 434</line>
<line>ASP CA 319</line>
<line>LYS CA 312</line>
<line>LEU CA 414</line>
<line>VAL CA 456</line>
<line>SER CA 384</line>
<line>TRP CA 389</line>
<line>ASP CA 304</line>
<line>ALA CA 373</line>
</n14>
</entryChain>
<parallel>
<x>70.13099670410156</x>
<y>26.7450008392334</y>
<z>-12.104999542236328</z>
</parallel>
<rotation>
<x>-0.7039999961853027</x>
<y>0.7099999785423279</y>
<z>-0.0020000000949949026</z>
<x>0.42800000309944153</x>
<y>0.4269999861717224</y>
<z>0.7960000038146973</z>
<x>0.5659999847412109</x>
<y>0.5600000023841858</y>
<z>-0.6050000190734863</z>
</rotation>
<rmsd>1.0365819931030273</rmsd>
<dmax>2.077133893966675</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>ECMKP--GGGGK</sequence>
<secondary-structure>H -- </secondary-structure>
<atom-coordinate>
<line>ATOM 694 CA GLU X 100 -20.497 32.916 36.776 1.00 18.38 C </line>
<line>ATOM 703 CA CYS X 101 -18.262 33.452 39.821 1.00 14.26 C </line>
<line>ATOM 709 CA MET X 102 -17.809 29.777 40.475 1.00 14.02 C </line>
<line>ATOM 717 CA LYS X 103 -16.605 26.689 38.657 1.00 18.17 C </line>
<line>ATOM 726 CA PRO X 104 -16.081 22.975 39.260 1.00 18.81 C </line>
<line>ATOM 733 CA GLY X 105 -12.475 22.712 40.528 1.00 18.60 C </line>
<line>ATOM 737 CA GLY X 106 -12.304 26.399 41.369 1.00 17.61 C </line>
<line>ATOM 741 CA GLY X 107 -10.475 27.945 44.233 1.00 17.12 C </line>
<line>ATOM 745 CA GLY X 108 -6.747 28.571 44.478 1.00 17.94 C </line>
<line>ATOM 749 CA LYS X 109 -5.200 31.906 43.596 1.00 19.65 C </line>
</atom-coordinate>
<distance-map>
<line> LYS GLY GLY GLY GLY PRO LYS MET CYS GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 16.78 16.35 13.44 11.43 13.51 11.16 7.58 5.55 3.82 </line>
<line>CYS CA 13.68 13.35 10.51 9.36 12.22 10.72 7.06 3.76 </line>
<line>MET CA 13.16 11.83 8.44 6.52 8.85 7.12 3.78 </line>
<line>LYS CA 13.48 11.60 8.38 5.09 6.03 3.80 </line>
<line>PRO CA 14.73 12.07 8.99 5.52 3.83 </line>
<line>GLY CA 12.12 9.10 6.72 3.79 </line>
<line>GLY CA 9.26 6.73 3.73 </line>
<line>GLY CA 6.63 3.79 </line>
<line>GLY CA 3.78 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>GLU CA 433</line>
<line>CYS CA 498</line>
<line>MET CA 465</line>
<line>LYS CA 351</line>
<line>PRO CA 275</line>
<line>GLY CA 235</line>
<line>GLY CA 307</line>
<line>GLY CA 334</line>
<line>GLY CA 264</line>
<line>LYS CA 309</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1B06</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B06A</entryIDChain>
<sequence>NNMAPAGKGGGK</sequence>
<secondary-structure>H </secondary-structure>
<atom-coordinate>
<line>ATOM 710 CA ASN A 89 55.119 46.333 38.461 1.00 13.84 C </line>
<line>ATOM 718 CA ASN A 90 56.753 49.753 38.737 1.00 11.90 C </line>
<line>ATOM 726 CA MET A 91 55.622 50.528 35.178 1.00 16.83 C </line>
<line>ATOM 734 CA ALA A 92 52.150 50.792 33.623 1.00 18.45 C </line>
<line>ATOM 739 CA PRO A 93 50.649 51.149 30.118 1.00 32.38 C </line>
<line>ATOM 746 CA ALA A 94 50.873 54.615 28.536 1.00 57.71 C </line>
<line>ATOM 751 CA GLY A 95 47.571 55.871 29.913 1.00 63.15 C </line>
<line>ATOM 755 CA LYS A 96 47.673 54.298 33.375 1.00 62.49 C </line>
<line>ATOM 764 CA GLY A 97 51.348 55.073 33.873 1.00 41.31 C </line>
<line>ATOM 768 CA GLY A 98 53.254 58.328 33.715 1.00 30.19 C </line>
<line>ATOM 772 CA GLY A 99 52.203 61.692 35.053 1.00 30.09 C </line>
<line>ATOM 776 CA LYS A 100 53.046 63.073 38.475 1.00 30.11 C </line>
</atom-coordinate>
<distance-map>
<line> LYS GLY GLY GLY LYS GLY ALA PRO ALA MET ASN ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 16.87 16.00 13.03 10.57 12.03 14.87 13.61 10.62 7.22 5.35 3.80 </line>
<line>ASN CA 13.83 13.30 10.54 9.01 11.48 14.13 12.74 10.65 6.96 3.81 </line>
<line>MET CA 13.22 11.68 8.28 6.37 8.98 11.00 9.13 7.12 3.81 </line>
<line>ALA CA 13.24 10.99 7.62 4.36 5.69 7.78 6.49 3.83 </line>
<line>PRO CA 14.76 11.74 8.44 5.48 5.42 5.64 3.82 </line>
<line>ALA CA 13.23 9.71 6.80 5.38 5.81 3.79 </line>
<line>GLY CA 12.46 9.04 7.27 5.53 3.80 </line>
<line>LYS CA 11.48 8.83 6.89 3.79 </line>
<line>GLY CA 9.38 6.78 3.78 </line>
<line>GLY CA 6.72 3.77 </line>
<line>GLY CA 3.79 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ASN CA 411</line>
<line>ASN CA 463</line>
<line>MET CA 470</line>
<line>ALA CA 367</line>
<line>PRO CA 296</line>
<line>ALA CA 256</line>
<line>GLY CA 188</line>
<line>LYS CA 225</line>
<line>GLY CA 319</line>
<line>GLY CA 323</line>
<line>GLY CA 268</line>
<line>LYS CA 300</line>
</n14>
</entryChain>
<parallel>
<x>-68.38400268554688</x>
<y>-24.173999786376953</y>
<z>5.505000114440918</z>
</parallel>
<rotation>
<x>-0.4860000014305115</x>
<y>0.578000009059906</y>
<z>0.656000018119812</z>
<x>0.8059999942779541</x>
<y>0.006000000052154064</y>
<z>0.5920000076293945</z>
<x>0.33799999952316284</x>
<y>0.8159999847412109</y>
<z>-0.4690000116825104</z>
</rotation>
<rmsd>1.092257022857666</rmsd>
<dmax>2.3136329650878906</dmax>
</indel>