NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1B06E-1UNFX
confEVID 1B06E-1UNFX
pdbIDA 1B06
pdbIDB 1UNF
pdbChainA E
pdbChainB X
identity 0.26129999756813
indelSize 3
alignment <alignment>
<seq1>VIQLKRYEFPQLPYKVDALEPYISKDIIDVHYNGHHKGYVNGANSLL-------DRLEKLIKGDLPQGQYDLQGILRGLTFNINGHKLHAIYWNNMAPAGKGGGKPGGALADLIDKQYGSFDRFKQVFSESANSLPGSGWTVLYYDNES------GNLQIMTVENHFMNH-IAELPVILIVDEFEHAYYLQYKNKRGDYLNAWWNV-VNWDDAEKRLQKYLNK--</seq1>
<seq2>-KVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHRTYVENLKKQVTELDGKSLEEIIVTAY--------NKGDILPAFNNAAQVWNHDFFWECMKP--GGGGKPSGELLELIERDFGSFEKFLDEFKAAAATQFGSGWAWLAYKASKLDADEDNKLVVIKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALSA</seq2>
<ss_1> HHHHHHIIIIHHHHHHHHHHHHH-------HHHHHHH HHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHHHHHHHHHH EEEEEE ------ EEEEEE - EEE HHHH HHHHHHHGGGG-EEHHHHHHHHH --</ss_1>
<ss_2>- HHHHHHIIIIHHHHHHHHHHHH HHHHHHHH --------GGG HHHHHHHHHHHHHHH -- HHHHHHHHHHH HHHHHHHHHHHHHH EEEEEEEEEEGGG EEEEEEE EEE EEE HHHH HHHHHHHHHH EEHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1B06</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1B06E</entryIDChain>
<sequence>HFMNH-IAELP</sequence>
<secondary-structure> - </secondary-structure>
<atom-coordinate>
<line>ATOM 7991 CA HIS E 155 56.175 0.753 25.597 1.00 9.35 C </line>
<line>ATOM 8001 CA PHE E 156 57.205 -0.918 22.333 1.00 8.99 C </line>
<line>ATOM 8012 CA MET E 157 59.426 1.274 20.157 1.00 10.76 C </line>
<line>ATOM 8020 CA ASN E 158 63.254 1.149 20.086 1.00 12.63 C </line>
<line>ATOM 8028 CA HIS E 159 63.879 -2.027 22.104 1.00 10.85 C </line>
<line>ATOM 8038 CA ILE E 160 66.979 -3.974 21.135 1.00 17.80 C </line>
<line>ATOM 8046 CA ALA E 161 65.840 -7.559 20.431 1.00 15.07 C </line>
<line>ATOM 8051 CA GLU E 162 66.526 -10.186 23.106 1.00 13.97 C </line>
<line>ATOM 8060 CA LEU E 163 68.608 -7.959 25.399 1.00 13.05 C </line>
<line>ATOM 8068 CA PRO E 164 67.863 -8.067 29.148 1.00 11.66 C </line>
</atom-coordinate>
<distance-map>
<line> PRO LEU GLU ALA ILE HIS ASN MET PHE HIS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>HIS CA 15.07 15.18 15.26 13.75 12.61 8.90 8.98 6.36 3.81 </line>
<line>PHE CA 14.53 13.75 13.17 11.06 10.31 6.77 6.78 3.80 </line>
<line>MET CA 15.47 14.04 13.80 10.92 9.25 5.88 3.83 </line>
<line>ASN CA 13.72 11.83 12.18 9.09 6.42 3.81 </line>
<line>HIS CA 10.10 8.27 8.64 6.10 3.79 </line>
<line>ILE CA 9.04 6.06 6.53 3.83 </line>
<line>ALA CA 8.96 5.70 3.81 </line>
<line>GLU CA 6.54 3.81 </line>
<line>LEU CA 3.82 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>HIS CA 414</line>
<line>PHE CA 336</line>
<line>MET CA 280</line>
<line>ASN CA 273</line>
<line>HIS CA 308</line>
<line>ILE CA 267</line>
<line>ALA CA 210</line>
<line>GLU CA 220</line>
<line>LEU CA 300</line>
<line>PRO CA 361</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>AVNPLVWGGYY</sequence>
<secondary-structure> EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1230 CA ALA X 179 -30.295 43.150 46.526 1.00 14.43 C </line>
<line>ATOM 1235 CA VAL X 180 -27.930 46.119 46.304 1.00 13.98 C </line>
<line>ATOM 1242 CA ASN X 181 -24.968 45.775 43.942 1.00 16.00 C </line>
<line>ATOM 1250 CA PRO X 182 -22.121 48.030 42.868 1.00 20.09 C </line>
<line>ATOM 1257 CA LEU X 183 -23.965 48.929 39.642 1.00 24.72 C </line>
<line>ATOM 1265 CA VAL X 184 -26.108 51.376 41.587 1.00 25.46 C </line>
<line>ATOM 1272 CA TRP X 185 -23.210 53.455 42.917 1.00 35.23 C </line>
<line>ATOM 1286 CA GLY X 186 -21.513 53.732 40.322 1.00 32.56 C </line>
<line>ATOM 1290 CA GLY X 187 -17.970 54.182 39.155 1.00 23.50 C </line>
<line>ATOM 1294 CA TYR X 188 -17.648 50.544 40.303 1.00 21.14 C </line>
<line>ATOM 1306 CA TYR X 189 -17.261 47.480 38.132 1.00 17.99 C </line>
</atom-coordinate>
<distance-map>
<line> TYR TYR GLY GLY TRP VAL LEU PRO ASN VAL ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 16.10 15.92 18.11 15.09 13.02 10.47 10.99 10.20 6.48 3.80 </line>
<line>VAL CA 13.51 12.70 14.67 11.62 9.36 7.29 8.25 7.01 3.80 </line>
<line>ASN CA 9.80 9.46 11.94 9.40 7.95 6.18 5.43 3.79 </line>
<line>PRO CA 6.81 5.74 8.30 6.27 5.53 5.36 3.82 </line>
<line>LEU CA 7.02 6.55 7.99 5.44 5.64 3.79 </line>
<line>VAL CA 10.27 8.60 8.95 5.32 3.81 </line>
<line>TRP CA 9.69 6.80 6.49 3.11 </line>
<line>GLY CA 7.87 5.01 3.76 </line>
<line>GLY CA 6.82 3.83 </line>
<line>TYR CA 3.78 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ALA CA 474</line>
<line>VAL CA 453</line>
<line>ASN CA 497</line>
<line>PRO CA 452</line>
<line>LEU CA 448</line>
<line>VAL CA 384</line>
<line>TRP CA 316</line>
<line>GLY CA 327</line>
<line>GLY CA 304</line>
<line>TYR CA 396</line>
<line>TYR CA 434</line>
</n14>
</entryChain>
<parallel>
<x>86.40699768066406</x>
<y>-51.858001708984375</y>
<z>-20.840999603271484</z>
</parallel>
<rotation>
<x>0.5789999961853027</x>
<y>-0.050999999046325684</y>
<z>-0.8140000104904175</z>
<x>0.10700000077486038</x>
<y>-0.9850000143051147</y>
<z>0.1379999965429306</z>
<x>-0.8080000281333923</x>
<y>-0.16699999570846558</y>
<z>-0.5640000104904175</z>
</rotation>
<rmsd>3.128504991531372</rmsd>
<dmax>5.267780780792236</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1B06</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1B06E</entryIDChain>
<sequence>AWWNV-VNWDD</sequence>
<secondary-structure>HGGGG-EEHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 8295 CA ALA E 190 64.523 12.126 42.634 1.00 17.65 C </line>
<line>ATOM 8300 CA TRP E 191 64.326 8.644 41.105 1.00 19.01 C </line>
<line>ATOM 8314 CA TRP E 192 68.079 8.098 41.623 1.00 19.87 C </line>
<line>ATOM 8328 CA ASN E 193 67.366 7.966 45.371 1.00 19.44 C </line>
<line>ATOM 8336 CA VAL E 194 65.160 4.863 45.141 1.00 19.30 C </line>
<line>ATOM 8343 CA VAL E 195 67.024 2.832 42.525 1.00 17.03 C </line>
<line>ATOM 8350 CA ASN E 196 67.495 -0.761 43.692 1.00 17.29 C </line>
<line>ATOM 8358 CA TRP E 197 71.093 -1.539 42.744 1.00 19.18 C </line>
<line>ATOM 8372 CA ASP E 198 70.851 -5.000 44.323 1.00 27.14 C </line>
<line>ATOM 8380 CA ASP E 199 68.100 -5.875 41.866 1.00 17.52 C </line>
</atom-coordinate>
<distance-map>
<line> ASP ASP TRP ASN VAL VAL ASN TRP TRP ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 18.37 18.34 15.16 13.27 9.63 7.71 5.73 5.47 3.81 </line>
<line>TRP CA 15.02 15.46 12.34 10.26 6.56 5.59 5.28 3.83 </line>
<line>TRP CA 13.98 13.66 10.16 9.12 5.45 5.60 3.82 </line>
<line>ASN CA 14.30 13.47 10.54 8.89 5.88 3.81 </line>
<line>VAL CA 11.60 11.42 9.05 6.26 3.80 </line>
<line>VAL CA 8.80 8.90 5.98 3.81 </line>
<line>ASN CA 5.46 5.44 3.80 </line>
<line>TRP CA 5.34 3.81 </line>
<line>ASP CA 3.79 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>ALA CA 353</line>
<line>TRP CA 474</line>
<line>TRP CA 436</line>
<line>ASN CA 335</line>
<line>VAL CA 405</line>
<line>VAL CA 468</line>
<line>ASN CA 399</line>
<line>TRP CA 387</line>
<line>ASP CA 305</line>
<line>ASP CA 356</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>VFMDKLVSWDA</sequence>
<secondary-structure>HHHH EEHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1540 CA VAL X 215 -14.909 27.036 51.212 1.00 17.49 C </line>
<line>ATOM 1547 CA PHE X 216 -16.268 29.339 48.506 1.00 15.04 C </line>
<line>ATOM 1558 CA MET X 217 -12.868 30.958 48.200 1.00 14.94 C </line>
<line>ATOM 1566 CA ASP X 218 -10.887 27.728 48.634 1.00 16.85 C </line>
<line>ATOM 1574 CA LYS X 219 -12.870 25.528 46.245 1.00 17.80 C </line>
<line>ATOM 1583 CA LEU X 220 -15.500 27.385 44.197 1.00 17.00 C </line>
<line>ATOM 1591 CA VAL X 221 -14.281 30.783 42.978 1.00 15.88 C </line>
<line>ATOM 1598 CA SER X 222 -13.480 31.028 39.279 1.00 17.21 C </line>
<line>ATOM 1604 CA TRP X 223 -10.506 33.343 39.005 1.00 17.98 C </line>
<line>ATOM 1618 CA ASP X 224 -10.806 33.052 35.208 1.00 18.69 C </line>
<line>ATOM 1626 CA ALA X 225 -14.212 34.695 35.498 1.00 15.47 C </line>
</atom-coordinate>
<distance-map>
<line> ALA ASP TRP SER VAL LEU LYS ASP MET PHE VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 17.50 17.58 14.43 12.66 9.07 7.05 5.58 4.83 5.35 3.80 </line>
<line>PHE CA 14.22 14.85 11.81 9.79 6.05 4.79 5.58 5.62 3.78 </line>
<line>MET CA 13.31 13.32 9.79 8.94 5.41 5.98 5.77 3.81 </line>
<line>ASP CA 15.24 14.44 11.15 10.25 7.27 6.41 3.81 </line>
<line>LYS CA 14.19 13.52 10.91 8.90 6.35 3.82 </line>
<line>LEU CA 11.44 11.62 9.35 6.45 3.81 </line>
<line>VAL CA 8.44 8.81 6.05 3.79 </line>
<line>SER CA 5.32 5.27 3.78 </line>
<line>TRP CA 5.28 3.82 </line>
<line>ASP CA 3.79 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>VAL CA 359</line>
<line>PHE CA 484</line>
<line>MET CA 434</line>
<line>ASP CA 319</line>
<line>LYS CA 312</line>
<line>LEU CA 414</line>
<line>VAL CA 456</line>
<line>SER CA 384</line>
<line>TRP CA 389</line>
<line>ASP CA 304</line>
<line>ALA CA 373</line>
</n14>
</entryChain>
<parallel>
<x>80.14199829101562</x>
<y>-24.18899917602539</y>
<z>-2.4030001163482666</z>
</parallel>
<rotation>
<x>0.7570000290870667</x>
<y>0.06800000369548798</y>
<z>0.6499999761581421</z>
<x>0.6520000100135803</x>
<y>-0.1420000046491623</y>
<z>-0.7450000047683716</z>
<x>0.041999999433755875</x>
<y>0.9879999756813049</y>
<z>-0.1509999930858612</z>
</rotation>
<rmsd>1.0410430431365967</rmsd>
<dmax>2.083359956741333</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1UNF</pdbID>
<pdbChain>X</pdbChain>
<entryIDChain>1UNFX</entryIDChain>
<sequence>ECMKP--GGGGK</sequence>
<secondary-structure>H -- </secondary-structure>
<atom-coordinate>
<line>ATOM 694 CA GLU X 100 -20.497 32.916 36.776 1.00 18.38 C </line>
<line>ATOM 703 CA CYS X 101 -18.262 33.452 39.821 1.00 14.26 C </line>
<line>ATOM 709 CA MET X 102 -17.809 29.777 40.475 1.00 14.02 C </line>
<line>ATOM 717 CA LYS X 103 -16.605 26.689 38.657 1.00 18.17 C </line>
<line>ATOM 726 CA PRO X 104 -16.081 22.975 39.260 1.00 18.81 C </line>
<line>ATOM 733 CA GLY X 105 -12.475 22.712 40.528 1.00 18.60 C </line>
<line>ATOM 737 CA GLY X 106 -12.304 26.399 41.369 1.00 17.61 C </line>
<line>ATOM 741 CA GLY X 107 -10.475 27.945 44.233 1.00 17.12 C </line>
<line>ATOM 745 CA GLY X 108 -6.747 28.571 44.478 1.00 17.94 C </line>
<line>ATOM 749 CA LYS X 109 -5.200 31.906 43.596 1.00 19.65 C </line>
</atom-coordinate>
<distance-map>
<line> LYS GLY GLY GLY GLY PRO LYS MET CYS GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 16.78 16.35 13.44 11.43 13.51 11.16 7.58 5.55 3.82 </line>
<line>CYS CA 13.68 13.35 10.51 9.36 12.22 10.72 7.06 3.76 </line>
<line>MET CA 13.16 11.83 8.44 6.52 8.85 7.12 3.78 </line>
<line>LYS CA 13.48 11.60 8.38 5.09 6.03 3.80 </line>
<line>PRO CA 14.73 12.07 8.99 5.52 3.83 </line>
<line>GLY CA 12.12 9.10 6.72 3.79 </line>
<line>GLY CA 9.26 6.73 3.73 </line>
<line>GLY CA 6.63 3.79 </line>
<line>GLY CA 3.78 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>GLU CA 433</line>
<line>CYS CA 498</line>
<line>MET CA 465</line>
<line>LYS CA 351</line>
<line>PRO CA 275</line>
<line>GLY CA 235</line>
<line>GLY CA 307</line>
<line>GLY CA 334</line>
<line>GLY CA 264</line>
<line>LYS CA 309</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1B06</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1B06E</entryIDChain>
<sequence>NNMAPAGKGGGK</sequence>
<secondary-structure>H </secondary-structure>
<atom-coordinate>
<line>ATOM 7498 CA ASN E 89 61.500 -4.423 41.409 1.00 17.07 C </line>
<line>ATOM 7506 CA ASN E 90 64.132 -2.016 40.075 1.00 13.25 C </line>
<line>ATOM 7514 CA MET E 91 63.280 0.404 42.892 1.00 18.20 C </line>
<line>ATOM 7522 CA ALA E 92 63.511 0.088 46.681 1.00 21.43 C </line>
<line>ATOM 7527 CA PRO E 93 62.389 2.059 49.747 1.00 31.22 C </line>
<line>ATOM 7534 CA ALA E 94 64.475 5.138 50.600 1.00 58.36 C </line>
<line>ATOM 7539 CA GLY E 95 66.958 3.328 52.831 1.00 62.13 C </line>
<line>ATOM 7543 CA LYS E 96 67.330 0.068 50.922 1.00 61.89 C </line>
<line>ATOM 7552 CA GLY E 97 67.359 1.834 47.568 1.00 43.72 C </line>
<line>ATOM 7556 CA GLY E 98 69.590 4.561 46.198 1.00 35.88 C </line>
<line>ATOM 7560 CA GLY E 99 73.309 4.921 46.656 1.00 32.09 C </line>
<line>ATOM 7564 CA LYS E 100 75.942 3.640 44.266 1.00 34.31 C </line>
</atom-coordinate>
<distance-map>
<line> LYS GLY GLY GLY LYS GLY ALA PRO ALA MET ASN ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 16.79 15.95 13.00 10.56 12.03 14.84 13.59 10.60 7.22 5.35 3.81 </line>
<line>ASN CA 13.75 13.25 10.51 9.02 11.50 14.12 12.73 10.64 6.96 3.81 </line>
<line>MET CA 13.14 11.63 8.25 6.37 9.00 10.99 9.12 7.11 3.81 </line>
<line>ALA CA 13.15 10.93 7.56 4.32 5.71 7.76 6.46 3.81 </line>
<line>PRO CA 14.70 11.70 8.41 5.43 5.46 5.66 3.82 </line>
<line>ALA CA 13.19 9.68 6.77 5.33 5.83 3.80 </line>
<line>GLY CA 12.42 9.00 7.24 5.49 3.80 </line>
<line>LYS CA 11.46 8.80 6.90 3.79 </line>
<line>GLY CA 9.37 6.76 3.78 </line>
<line>GLY CA 6.70 3.76 </line>
<line>GLY CA 3.78 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ASN CA 411</line>
<line>ASN CA 463</line>
<line>MET CA 471</line>
<line>ALA CA 367</line>
<line>PRO CA 298</line>
<line>ALA CA 257</line>
<line>GLY CA 191</line>
<line>LYS CA 226</line>
<line>GLY CA 319</line>
<line>GLY CA 326</line>
<line>GLY CA 268</line>
<line>LYS CA 304</line>
</n14>
</entryChain>
<parallel>
<x>-80.44999694824219</x>
<y>27.535999298095703</y>
<z>-5.546999931335449</z>
</parallel>
<rotation>
<x>0.9520000219345093</x>
<y>0.28200000524520874</y>
<z>0.11800000071525574</z>
<x>-0.02500000037252903</x>
<y>-0.3109999895095825</y>
<z>0.949999988079071</z>
<x>0.30399999022483826</x>
<y>-0.9079999923706055</y>
<z>-0.289000004529953</z>
</rotation>
<rmsd>1.1076960563659668</rmsd>
<dmax>2.3415560722351074</dmax>
</indel>