NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1B3IA-2AANA
confEVID 1B3IA-2AANA
pdbIDA 1B3I
pdbIDB 2AAN
pdbChainA A
pdbChainB A
identity 0.20160000026226
indelSize 2
alignment <alignment>
<seq1>ASVQIKMGTDKYAPLYEPKALSISAGDTVE--FVMN-KVGPHNVIFDKVPAGESAPALS-------------------NTKLAIAPGSFYSVTLGT----PGTYSFYCTPHRGAG-MVGTITVE</seq1>
<seq2>GPVTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQHNWILV-KGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLVVN</seq2>
<ss_1> EEEEE EEE EEEE--EE - EE HHHH ------------------- EEEEE ---- EEEEEE -EEEEEE </ss_1>
<ss_2> EEEEEEEE EEEEEEEE EEEEEE- HHHHHHHHHHHHHH EEEEEEEEE EEEEEE EEEEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1B3I</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B3IA</entryIDChain>
<sequence>VTLGT----PGTYS</sequence>
<secondary-structure>EEE ---- EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1024 CA VAL A 70 7.584 7.048 0.723 1.00 0.00 C </line>
<line>ATOM 1040 CA THR A 71 9.289 7.461 4.077 1.00 0.00 C </line>
<line>ATOM 1054 CA LEU A 72 7.411 7.544 7.362 1.00 0.00 C </line>
<line>ATOM 1073 CA GLY A 73 8.192 8.516 10.936 1.00 0.00 C </line>
<line>ATOM 1080 CA THR A 74 4.987 8.846 12.923 1.00 0.00 C </line>
<line>ATOM 1094 CA PRO A 75 4.719 5.845 15.255 1.00 0.00 C </line>
<line>ATOM 1108 CA GLY A 76 1.594 3.720 15.040 1.00 0.00 C </line>
<line>ATOM 1115 CA THR A 77 -0.260 1.327 12.768 1.00 0.00 C </line>
<line>ATOM 1129 CA TYR A 78 -1.268 2.631 9.361 1.00 0.00 C </line>
<line>ATOM 1150 CA SER A 79 -4.146 1.165 7.387 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> SER TYR THR GLY PRO THR GLY LEU THR VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 14.72 13.13 15.47 15.87 14.86 12.60 10.34 6.66 3.79 </line>
<line>THR CA 15.20 12.76 14.29 13.91 12.18 9.93 7.03 3.78 </line>
<line>LEU CA 13.20 10.17 11.26 10.36 8.51 6.20 3.79 </line>
<line>GLY CA 14.79 11.25 11.25 9.13 6.15 3.79 </line>
<line>THR CA 13.16 9.51 9.17 6.50 3.81 </line>
<line>PRO CA 12.74 9.00 7.17 3.79 </line>
<line>GLY CA 9.90 6.45 3.78 </line>
<line>THR CA 6.64 3.78 </line>
<line>TYR CA 3.79 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>VAL CA 608</line>
<line>THR CA 540</line>
<line>LEU CA 597</line>
<line>GLY CA 462</line>
<line>THR CA 451</line>
<line>PRO CA 413</line>
<line>GLY CA 445</line>
<line>THR CA 541</line>
<line>TYR CA 707</line>
<line>SER CA 701</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2AAN</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2AANA</entryIDChain>
<sequence>VEVTFTAPAAGTYL</sequence>
<secondary-structure>EEEEEEE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 654 CA VAL A 107 13.356 54.176 -1.639 1.00 14.27 C </line>
<line>ATOM 661 CA GLU A 108 17.046 53.314 -1.900 1.00 14.71 C </line>
<line>ATOM 670 CA VAL A 109 19.743 51.736 0.141 1.00 12.40 C </line>
<line>ATOM 677 CA THR A 110 23.409 51.614 -0.932 1.00 13.57 C </line>
<line>ATOM 684 CA PHE A 111 25.648 49.018 0.740 1.00 12.16 C </line>
<line>ATOM 695 CA THR A 112 28.879 47.122 0.236 1.00 14.55 C </line>
<line>ATOM 702 CA ALA A 113 28.010 43.515 -0.538 1.00 13.79 C </line>
<line>ATOM 707 CA PRO A 114 29.045 41.142 2.245 1.00 20.69 C </line>
<line>ATOM 714 CA ALA A 115 31.382 38.123 1.977 1.00 26.36 C </line>
<line>ATOM 719 CA ALA A 116 30.601 35.365 -0.553 1.00 25.06 C </line>
<line>ATOM 724 CA GLY A 117 27.527 33.407 0.527 1.00 27.58 C </line>
<line>ATOM 728 CA THR A 118 23.732 33.549 0.423 1.00 21.61 C </line>
<line>ATOM 735 CA TYR A 119 21.707 35.932 2.561 1.00 18.12 C </line>
<line>ATOM 747 CA LEU A 120 18.015 36.470 3.154 1.00 13.66 C </line>
</atom-coordinate>
<distance-map>
<line> LEU TYR THR GLY ALA ALA PRO ALA THR PHE THR VAL GLU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 18.93 20.50 23.18 25.24 25.54 24.41 20.76 18.16 17.15 13.54 10.40 7.07 3.80 </line>
<line>GLU CA 17.61 18.54 20.99 22.63 22.53 21.24 17.59 14.77 13.52 9.97 6.66 3.73 </line>
<line>VAL CA 15.66 16.11 18.62 19.92 19.66 18.00 14.25 11.68 10.24 6.53 3.82 </line>
<line>THR CA 16.59 16.16 18.12 18.72 17.77 15.94 12.31 9.32 7.17 3.81 </line>
<line>PHE CA 14.88 13.79 15.59 15.73 14.58 12.37 8.71 6.12 3.78 </line>
<line>THR CA 15.49 13.49 14.52 13.78 11.91 9.50 6.31 3.79 </line>
<line>ALA CA 12.77 10.34 10.89 10.18 8.55 6.84 3.80 </line>
<line>PRO CA 12.01 9.01 9.44 8.07 6.60 3.83 </line>
<line>ALA CA 13.52 9.94 9.05 6.26 3.82 </line>
<line>ALA CA 13.17 9.44 7.17 3.80 </line>
<line>GLY CA 10.33 6.66 3.80 </line>
<line>THR CA 6.98 3.79 </line>
<line>TYR CA 3.78 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>VAL CA 303</line>
<line>GLU CA 301</line>
<line>VAL CA 327</line>
<line>THR CA 277</line>
<line>PHE CA 297</line>
<line>THR CA 256</line>
<line>ALA CA 302</line>
<line>PRO CA 264</line>
<line>ALA CA 194</line>
<line>ALA CA 178</line>
<line>GLY CA 202</line>
<line>THR CA 265</line>
<line>TYR CA 343</line>
<line>LEU CA 401</line>
</n14>
</entryChain>
<parallel>
<x>-17.19300079345703</x>
<y>-38.98400115966797</y>
<z>10.28499984741211</z>
</parallel>
<rotation>
<x>0.22100000083446503</x>
<y>0.3619999885559082</y>
<z>0.9049999713897705</z>
<x>0.6389999985694885</x>
<y>0.6470000147819519</y>
<z>-0.41499999165534973</z>
<x>-0.7360000014305115</x>
<y>0.6710000038146973</y>
<z>-0.08799999952316284</z>
</rotation>
<rmsd>4.71188497543335</rmsd>
<dmax>7.731757164001465</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2AAN</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2AANA</entryIDChain>
<sequence>NWILV-KGGEA</sequence>
<secondary-structure>EEEEE- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 318 CA ASN A 59 10.857 47.589 3.415 1.00 13.76 C </line>
<line>ATOM 326 CA TRP A 60 13.864 45.580 2.171 1.00 7.70 C </line>
<line>ATOM 340 CA ILE A 61 16.132 44.368 4.926 1.00 14.58 C </line>
<line>ATOM 348 CA LEU A 62 19.231 42.254 4.329 1.00 13.63 C </line>
<line>ATOM 356 CA VAL A 63 19.955 40.048 7.241 1.00 11.35 C </line>
<line>ATOM 363 CA LYS A 64 22.614 37.769 8.601 1.00 22.35 C </line>
<line>ATOM 372 CA GLY A 65 21.542 34.269 9.681 1.00 21.77 C </line>
<line>ATOM 376 CA GLY A 66 18.837 31.887 8.634 1.00 24.05 C </line>
<line>ATOM 380 CA GLU A 67 15.098 32.017 8.630 1.00 16.11 C </line>
<line>ATOM 389 CA ALA A 68 15.164 31.823 12.443 1.00 18.77 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU GLY GLY LYS VAL LEU ILE TRP ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 18.67 16.96 18.37 18.19 16.17 12.42 9.97 6.36 3.82 </line>
<line>TRP CA 17.22 15.07 15.94 15.60 13.38 9.66 6.67 3.77 </line>
<line>ILE CA 14.66 12.94 13.30 12.40 9.95 6.22 3.80 </line>
<line>LEU CA 13.83 11.85 11.23 9.89 7.06 3.72 </line>
<line>VAL CA 10.85 9.49 8.35 6.47 3.76 </line>
<line>LYS CA 10.28 9.46 6.99 3.82 </line>
<line>GLY CA 7.37 6.91 3.75 </line>
<line>GLY CA 5.29 3.74 </line>
<line>GLU CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ASN CA 507</line>
<line>TRP CA 557</line>
<line>ILE CA 552</line>
<line>LEU CA 504</line>
<line>VAL CA 410</line>
<line>LYS CA 312</line>
<line>GLY CA 247</line>
<line>GLY CA 229</line>
<line>GLU CA 238</line>
<line>ALA CA 189</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1B3I</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B3IA</entryIDChain>
<sequence>NVIFDKVPAGE</sequence>
<secondary-structure> EE </secondary-structure>
<atom-coordinate>
<line>ATOM 592 CA ASN A 40 -3.153 3.043 -6.285 1.00 0.00 C </line>
<line>ATOM 606 CA VAL A 41 -2.531 4.150 -2.719 1.00 0.00 C </line>
<line>ATOM 622 CA ILE A 42 -5.685 5.005 -0.810 1.00 0.00 C </line>
<line>ATOM 641 CA PHE A 43 -4.883 4.954 2.888 1.00 0.00 C </line>
<line>ATOM 661 CA ASP A 44 -7.722 4.424 5.335 1.00 0.00 C </line>
<line>ATOM 673 CA LYS A 45 -6.586 6.586 8.226 1.00 0.00 C </line>
<line>ATOM 695 CA VAL A 46 -3.657 6.989 10.591 1.00 0.00 C </line>
<line>ATOM 711 CA PRO A 47 -3.266 8.245 14.166 1.00 0.00 C </line>
<line>ATOM 725 CA ALA A 48 -1.923 11.669 15.061 1.00 0.00 C </line>
<line>ATOM 735 CA GLY A 49 1.519 12.106 13.549 1.00 0.00 C </line>
<line>ATOM 742 CA GLU A 50 1.056 11.409 9.858 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> GLU GLY ALA PRO VAL LYS ASP PHE ILE VAL ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 18.66 22.30 23.06 21.10 17.34 15.33 12.56 9.53 6.34 3.79 </line>
<line>VAL CA 14.96 18.56 19.31 17.39 13.66 11.92 9.59 6.13 3.78 </line>
<line>ILE CA 14.15 17.56 17.62 15.51 11.75 9.22 6.50 3.78 </line>
<line>PHE CA 11.20 14.35 14.21 11.86 8.06 5.84 3.79 </line>
<line>ASP CA 12.10 14.56 13.44 10.60 7.12 3.78 </line>
<line>LYS CA 9.18 11.16 9.71 7.00 3.79 </line>
<line>VAL CA 6.50 7.86 6.70 3.81 </line>
<line>PRO CA 6.87 6.18 3.79 </line>
<line>ALA CA 6.00 3.78 </line>
<line>GLY CA 3.78 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>ASN CA 760</line>
<line>VAL CA 844</line>
<line>ILE CA 726</line>
<line>PHE CA 725</line>
<line>ASP CA 560</line>
<line>LYS CA 470</line>
<line>VAL CA 491</line>
<line>PRO CA 373</line>
<line>ALA CA 291</line>
<line>GLY CA 352</line>
<line>GLU CA 467</line>
</n14>
</entryChain>
<parallel>
<x>21.981000900268555</x>
<y>34.4109992980957</y>
<z>1.3459999561309814</z>
</parallel>
<rotation>
<x>-0.4169999957084656</x>
<y>-0.593999981880188</y>
<z>-0.6880000233650208</z>
<x>-0.5960000157356262</x>
<y>-0.3930000066757202</y>
<z>0.699999988079071</z>
<x>0.6859999895095825</x>
<y>-0.7020000219345093</y>
<z>0.1899999976158142</z>
</rotation>
<rmsd>2.425291061401367</rmsd>
<dmax>3.3882040977478027</dmax>
</indel>