NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1B5XA-1GHLA
confEVID 1B5XA-1GHLA
pdbIDA 1B5X
pdbIDB 1GHL
pdbChainA A
pdbChainB A
identity 0.58459997177124
indelSize 1
alignment <alignment>
<seq1>-KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLACSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV</seq1>
<seq2>GKVYGRCELAAAMKRMGLDNYRGYSLGNWVCAAKFESNFNTGATNRNT-DGSTDYGILQINSRWWCNDGRTPGSKNLCHIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRKHCKGTDVNVWIRGCRL</seq2>
<ss_1>- HHHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EE GGGGG HHHHHHHHHGGG GGGG HHHHH </ss_1>
<ss_2> HHHHHHHHHH GGG HHHHHHHHHH EEEEE - EEEEE EE GGGG HHHHHHHHHHH GGGG HHHHH GGGGG </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1GHL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1GHLA</entryIDChain>
<sequence>TNRNT-DGSTD</sequence>
<secondary-structure>EEEE - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 331 CA THR A 43 -6.315 77.617 -28.076 1.00 30.35 C </line>
<line>ATOM 338 CA ASN A 44 -6.101 75.240 -31.101 1.00 33.58 C </line>
<line>ATOM 346 CA ARG A 45 -8.780 75.368 -33.844 1.00 35.40 C </line>
<line>ATOM 357 CA ASN A 46 -9.761 72.138 -35.610 1.00 30.67 C </line>
<line>ATOM 365 CA THR A 47 -11.042 71.106 -39.119 1.00 34.29 C </line>
<line>ATOM 372 CA ASP A 48 -14.446 70.318 -37.668 1.00 21.51 C </line>
<line>ATOM 380 CA GLY A 49 -14.894 73.886 -36.350 1.00 23.21 C </line>
<line>ATOM 384 CA SER A 50 -14.252 72.895 -32.694 1.00 21.75 C </line>
<line>ATOM 390 CA THR A 51 -11.493 74.657 -30.655 1.00 20.62 C </line>
<line>ATOM 397 CA ASP A 52 -9.343 73.320 -27.822 1.00 19.15 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR SER GLY ASP THR ASN ARG ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 5.26 6.50 10.33 12.49 14.54 13.66 9.93 6.66 3.85 </line>
<line>ASN CA 4.99 5.44 8.63 10.33 11.70 10.29 6.58 3.84 </line>
<line>ARG CA 6.39 4.25 6.11 6.77 8.50 7.15 3.81 </line>
<line>ASN CA 7.89 5.82 5.41 5.47 5.43 3.88 </line>
<line>THR CA 11.64 9.19 7.40 5.50 3.78 </line>
<line>ASP CA 11.49 8.76 5.61 3.83 </line>
<line>GLY CA 10.19 6.68 3.84 </line>
<line>SER CA 6.93 3.86 </line>
<line>THR CA 3.80 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>THR CA 296</line>
<line>ASN CA 268</line>
<line>ARG CA 216</line>
<line>ASN CA 195</line>
<line>THR CA 133</line>
<line>ASP CA 160</line>
<line>GLY CA 194</line>
<line>SER CA 261</line>
<line>THR CA 312</line>
<line>ASP CA 401</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1B5X</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B5XA</entryIDChain>
<sequence>TNYNAGDRSTD</sequence>
<secondary-structure>EEEE EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 343 CA THR A 43 3.506 9.077 25.370 1.00 14.29 C </line>
<line>ATOM 350 CA ASN A 44 4.923 5.570 25.047 1.00 12.86 C </line>
<line>ATOM 358 CA TYR A 45 3.781 2.543 27.017 1.00 12.22 C </line>
<line>ATOM 370 CA ASN A 46 6.303 -0.156 28.031 1.00 11.85 C </line>
<line>ATOM 378 CA ALA A 47 4.324 -3.414 28.420 1.00 11.41 C </line>
<line>ATOM 383 CA GLY A 48 7.284 -5.233 29.941 1.00 13.98 C </line>
<line>ATOM 387 CA ASP A 49 7.654 -3.281 33.184 1.00 12.42 C </line>
<line>ATOM 395 CA ARG A 50 4.285 -1.553 32.995 1.00 13.29 C </line>
<line>ATOM 406 CA SER A 51 5.696 1.992 32.948 1.00 9.02 C </line>
<line>ATOM 412 CA THR A 52 5.171 4.829 30.467 1.00 10.40 C </line>
<line>ATOM 419 CA ASP A 53 7.270 7.664 29.047 1.00 6.13 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR SER ARG ASP GLY ALA ASN TYR ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 5.45 6.84 10.60 13.11 15.20 15.49 12.88 10.01 6.74 3.80 </line>
<line>ASN CA 5.09 5.48 8.71 10.69 12.33 12.09 9.61 6.60 3.79 </line>
<line>TYR CA 6.52 4.37 6.26 7.26 9.32 9.02 6.14 3.83 </line>
<line>ASN CA 7.94 5.66 5.40 5.54 6.18 5.51 3.83 </line>
<line>ALA CA 11.48 8.54 7.18 4.94 5.81 3.79 </line>
<line>GLY CA 12.93 10.29 7.99 5.64 3.80 </line>
<line>ASP CA 11.71 8.91 5.63 3.79 </line>
<line>ARG CA 10.46 6.92 3.82 </line>
<line>SER CA 7.06 3.81 </line>
<line>THR CA 3.80 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>THR CA 292</line>
<line>ASN CA 264</line>
<line>TYR CA 229</line>
<line>ASN CA 201</line>
<line>ALA CA 142</line>
<line>GLY CA 133</line>
<line>ASP CA 173</line>
<line>ARG CA 199</line>
<line>SER CA 263</line>
<line>THR CA 320</line>
<line>ASP CA 411</line>
</n14>
</entryChain>
<parallel>
<x>-15.758000373840332</x>
<y>72.2239990234375</y>
<z>-63.433998107910156</z>
</parallel>
<rotation>
<x>0.03099999949336052</x>
<y>-0.9350000023841858</y>
<z>0.3540000021457672</z>
<x>0.11999999731779099</x>
<y>0.35499998927116394</y>
<z>0.9269999861717224</z>
<x>-0.9919999837875366</x>
<y>0.014000000432133675</y>
<z>0.12399999797344208</z>
</rotation>
<rmsd>0.7763069868087769</rmsd>
<dmax>1.5208319425582886</dmax>
</indel>