NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1B8MB-1HCFA
confEVID 1B8MB-1HCFA
pdbIDA 1B8M
pdbIDB 1HCF
pdbChainA B
pdbChainB A
identity 0.964299976825714
indelSize 1
alignment <alignment>
<seq1>-----------GELAVCDAVSGWVTDRRTAVDLRGREVEVLGEVPAAGGSPLRQYFFETRCKAAGGPGAGGGGCRGVDRRHWVSECKAKQSYVRALTADAQGRVGWRWIRIDTACVCTLLSRTGRA</seq1>
<seq2>GVSETAPASRRGELAVCDAVSGWVTDRRTAVDLRGREVEVLGEVPAAGGSPLRQYFFETRCK--ADPGAGGGGCRGVDRRHWVSECKAKQSYVRALTADAQGRVGWRWIRIDTACVCTLLSRT---</seq2>
<ss_1>----------- EEEEEEE EEEEE EEEE EEE EE EEEEE EEEEEEEEEEEEEEEEE EEEEEEEEE EEEEE </ss_1>
<ss_2> EEEEEEE EEEEE EEEE EEE EEE EEEEEEE-- EEEEEEEEEEEEEEEEEE EEEEEEEEE EEEEEEE ---</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1HCF</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1HCFA</entryIDChain>
<sequence>ETRCK--ADPGA</sequence>
<secondary-structure>EEEEE-- </secondary-structure>
<atom-coordinate>
<line>ATOM 417 CA GLU A 58 9.210 -3.123 28.692 1.00 34.33 C </line>
<line>ATOM 426 CA THR A 59 9.378 -0.173 26.324 1.00 36.20 C </line>
<line>ATOM 433 CA ARG A 60 12.276 0.313 23.904 1.00 35.83 C </line>
<line>ATOM 444 CA CYS A 61 12.896 2.894 21.179 1.00 39.48 C </line>
<line>ATOM 450 CA LYS A 62 11.737 1.873 17.717 1.00 50.45 C </line>
<line>ATOM 456 CA ALA A 63 14.761 0.946 15.611 1.00 62.42 C </line>
<line>ATOM 461 CA ASP A 64 15.458 2.885 12.418 1.00 76.46 C </line>
<line>ATOM 469 CA PRO A 71 12.932 11.667 12.989 1.00 91.37 C </line>
<line>ATOM 476 CA GLY A 72 11.591 9.711 15.957 1.00 89.94 C </line>
<line>ATOM 480 CA ALA A 73 13.810 6.620 15.767 1.00 89.20 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLY PRO ASP ALA LYS CYS ARG THR GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 16.83 18.24 21.89 18.44 14.78 12.32 10.31 6.64 3.79 </line>
<line>THR CA 13.31 14.49 18.18 15.48 12.04 9.16 6.95 3.81 </line>
<line>ARG CA 10.41 12.33 15.76 12.19 8.68 6.40 3.80 </line>
<line>CYS CA 6.63 8.69 12.00 9.13 6.19 3.79 </line>
<line>LYS CA 5.53 8.03 10.94 6.55 3.80 </line>
<line>ALA CA 5.76 9.33 11.19 3.80 </line>
<line>ASP CA 5.28 8.61 9.16 </line>
<line>PRO CA 5.83 3.80 </line>
<line>GLY CA 3.81 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLU CA 272</line>
<line>THR CA 256</line>
<line>ARG CA 263</line>
<line>CYS CA 263</line>
<line>LYS CA 213</line>
<line>ALA CA 172</line>
<line>ASP CA 142</line>
<line>PRO CA 213</line>
<line>GLY CA 240</line>
<line>ALA CA 220</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1B8M</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1B8MB</entryIDChain>
<sequence>ETRCKAAGGPGA</sequence>
<secondary-structure>EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 1209 CA GLU B 58 -4.293 22.722 12.922 1.00 18.11 C </line>
<line>ATOM 1218 CA THR B 59 -3.479 19.719 15.067 1.00 14.15 C </line>
<line>ATOM 1225 CA ARG B 60 -4.713 19.638 18.710 1.00 28.16 C </line>
<line>ATOM 1236 CA CYS B 61 -5.021 17.173 21.603 1.00 13.77 C </line>
<line>ATOM 1242 CA LYS B 62 -7.995 14.802 21.778 1.00 39.90 C </line>
<line>ATOM 1251 CA ALA B 63 -8.003 15.450 25.517 1.00139.65 C </line>
<line>ATOM 1256 CA ALA B 68 -13.760 20.239 34.261 1.00101.40 C </line>
<line>ATOM 1261 CA GLY B 69 -13.514 16.457 34.836 1.00 94.94 C </line>
<line>ATOM 1265 CA GLY B 70 -14.578 14.660 38.037 1.00 58.42 C </line>
<line>ATOM 1269 CA PRO B 71 -12.760 16.059 41.170 1.00 60.40 C </line>
<line>ATOM 1276 CA GLY B 72 -9.868 14.153 42.704 1.00 80.89 C </line>
<line>ATOM 1280 CA ALA B 73 -9.859 11.801 39.676 1.00126.64 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLY PRO GLY GLY ALA ALA LYS CYS ARG THR GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 29.43 31.49 30.23 28.31 24.59 23.48 15.01 12.44 10.33 6.57 3.78 </line>
<line>THR CA 26.63 28.91 27.94 26.01 22.41 21.78 12.16 9.47 7.18 3.85 </line>
<line>ARG CA 22.97 25.15 24.12 22.26 18.64 18.00 8.64 6.60 3.81 </line>
<line>CYS CA 19.47 21.86 21.07 19.18 15.74 15.68 5.21 3.81 </line>
<line>LYS CA 18.24 21.02 20.01 17.54 14.27 14.79 3.79 </line>
<line>ALA CA 14.74 17.34 16.37 14.16 10.87 11.51 </line>
<line>ALA CA 10.76 11.11 8.14 6.79 3.83 </line>
<line>GLY CA 7.65 8.97 6.39 3.82 </line>
<line>GLY CA 5.76 6.65 3.88 </line>
<line>PRO CA 5.36 3.79 </line>
<line>GLY CA 3.83 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>GLU CA 268</line>
<line>THR CA 255</line>
<line>ARG CA 254</line>
<line>CYS CA 241</line>
<line>LYS CA 191</line>
<line>ALA CA 196</line>
<line>ALA CA 50</line>
<line>GLY CA 51</line>
<line>GLY CA 42</line>
<line>PRO CA 39</line>
<line>GLY CA 46</line>
<line>ALA CA 54</line>
</n14>
</entryChain>
<parallel>
<x>20.625</x>
<y>-15.493000030517578</y>
<z>-5.660999774932861</z>
</parallel>
<rotation>
<x>-0.5979999899864197</x>
<y>0.5870000123977661</y>
<z>0.5450000166893005</z>
<x>0.7630000114440918</x>
<y>0.20999999344348907</y>
<z>0.6110000014305115</z>
<x>0.24400000274181366</x>
<y>0.7820000052452087</y>
<z>-0.5740000009536743</z>
</rotation>
<rmsd>5.6405158042907715</rmsd>
<dmax>7.281383037567139</dmax>
</indel>