NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1B9OA-1IP2A
confEVID 1B9OA-1IP2A
pdbIDA 1B9O
pdbIDB 1IP2
pdbChainA A
pdbChainB A
identity 0.338299989700317
indelSize 2
alignment <alignment>
<seq1>KQFTKCELSQLLKDI--DGYGGIALPELICTMFHTSGYDTQAIVEND--ESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI-KGI----DYWLAHKALCTE-KLEQWLCEKL-</seq1>
<seq2>KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAADRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRN----RCQNRDVRQYVQGCGV</seq2>
<ss_1> HHHHHHHHGGG-- GGG HHHHHHHHHH EEE -- EEEEE EE GGGGG HHHHHHHHHHHH - GG----HHHH - GGGG -</ss_1>
<ss_2> HHHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EE GGGGG HHHHHHHHHGGG GGGG HHHHH---- </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1B9O</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B9OA</entryIDChain>
<sequence>LLKDI--DGYGG</sequence>
<secondary-structure>HHGGG-- GGG</secondary-structure>
<atom-coordinate>
<line>ATOM 97 CA LEU A 11 -5.954 26.151 38.229 1.00 28.15 C </line>
<line>ATOM 105 CA LEU A 12 -6.683 25.035 34.693 1.00 28.18 C </line>
<line>ATOM 113 CA LYS A 13 -9.994 23.307 35.361 1.00 37.20 C </line>
<line>ATOM 122 CA ASP A 14 -11.934 25.941 33.500 1.00 38.62 C </line>
<line>ATOM 130 CA ILE A 15 -9.878 25.703 30.365 1.00 31.19 C </line>
<line>ATOM 138 CA ASP A 16 -10.851 22.075 29.857 1.00 29.92 C </line>
<line>ATOM 146 CA GLY A 17 -12.264 21.811 26.339 1.00 29.95 C </line>
<line>ATOM 150 CA TYR A 18 -10.979 25.166 25.162 1.00 25.74 C </line>
<line>ATOM 162 CA GLY A 19 -10.112 24.808 21.493 1.00 30.37 C </line>
<line>ATOM 166 CA GLY A 20 -11.243 21.183 21.778 1.00 30.97 C </line>
</atom-coordinate>
<distance-map>
<line> GLY GLY TYR GLY ASP ILE ASP LYS LEU LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 17.98 17.30 14.03 14.14 10.52 8.80 7.63 5.71 3.78 </line>
<line>LEU CA 14.23 13.64 10.46 10.55 7.04 5.42 5.46 3.79 </line>
<line>LYS CA 13.80 13.95 10.41 9.42 5.70 5.54 3.76 </line>
<line>ASP CA 12.67 12.20 8.43 8.27 5.42 3.76 </line>
<line>ILE CA 9.80 8.92 5.35 6.09 3.79 </line>
<line>ASP CA 8.14 8.83 5.62 3.80 </line>
<line>GLY CA 4.72 6.09 3.78 </line>
<line>TYR CA 5.23 3.79 </line>
<line>GLY CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>LEU CA 297</line>
<line>LEU CA 351</line>
<line>LYS CA 260</line>
<line>ASP CA 208</line>
<line>ILE CA 280</line>
<line>ASP CA 258</line>
<line>GLY CA 197</line>
<line>TYR CA 232</line>
<line>GLY CA 225</line>
<line>GLY CA 186</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IP2</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IP2A</entryIDChain>
<sequence>TLKRLGMDGYRG</sequence>
<secondary-structure>HHHH GGG</secondary-structure>
<atom-coordinate>
<line>ATOM 88 CA THR A 11 11.801 27.800 25.023 1.00 2.78 C </line>
<line>ATOM 95 CA LEU A 12 14.385 25.473 26.664 1.00 2.91 C </line>
<line>ATOM 103 CA LYS A 13 16.998 28.250 26.830 1.00 4.11 C </line>
<line>ATOM 112 CA ARG A 14 14.480 30.519 28.571 1.00 6.90 C </line>
<line>ATOM 123 CA LEU A 15 13.871 27.698 31.092 1.00 5.23 C </line>
<line>ATOM 131 CA GLY A 16 17.561 27.444 32.007 1.00 5.51 C </line>
<line>ATOM 135 CA MET A 17 18.497 24.241 30.179 1.00 4.23 C </line>
<line>ATOM 143 CA ASP A 18 21.538 25.529 28.259 1.00 7.15 C </line>
<line>ATOM 151 CA GLY A 19 24.493 23.847 29.927 1.00 6.17 C </line>
<line>ATOM 155 CA TYR A 20 22.411 22.620 32.871 1.00 5.26 C </line>
<line>ATOM 167 CA ARG A 21 24.703 20.226 34.795 1.00 8.16 C </line>
<line>ATOM 178 CA GLY A 22 27.096 20.488 31.838 1.00 5.17 C </line>
</atom-coordinate>
<distance-map>
<line> GLY ARG TYR GLY ASP MET GLY LEU ARG LYS LEU THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 18.27 17.87 14.18 14.17 10.51 9.17 9.06 6.41 5.21 5.52 3.85 </line>
<line>LEU CA 14.60 14.15 10.54 10.75 7.33 5.55 6.52 4.98 5.40 3.82 </line>
<line>LYS CA 13.69 13.68 9.87 9.23 5.48 5.43 5.27 5.31 3.81 </line>
<line>ARG CA 16.45 15.79 11.99 12.11 8.65 7.62 5.55 3.83 </line>
<line>LEU CA 15.08 13.67 10.09 11.36 8.46 5.85 3.81 </line>
<line>GLY CA 11.80 10.53 6.89 8.08 5.79 3.80 </line>
<line>MET CA 9.53 8.71 5.02 6.01 3.82 </line>
<line>ASP CA 8.31 8.99 5.52 3.79 </line>
<line>GLY CA 4.66 6.07 3.81 </line>
<line>TYR CA 5.25 3.83 </line>
<line>ARG CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>THR CA 323</line>
<line>LEU CA 390</line>
<line>LYS CA 302</line>
<line>ARG CA 236</line>
<line>LEU CA 266</line>
<line>GLY CA 261</line>
<line>MET CA 343</line>
<line>ASP CA 295</line>
<line>GLY CA 243</line>
<line>TYR CA 274</line>
<line>ARG CA 241</line>
<line>GLY CA 210</line>
</n14>
</entryChain>
<parallel>
<x>-27.31399917602539</x>
<y>-2.068000078201294</y>
<z>3.0339999198913574</z>
</parallel>
<rotation>
<x>-0.5329999923706055</x>
<y>-0.6499999761581421</y>
<z>-0.5419999957084656</z>
<x>-0.7739999890327454</x>
<y>0.11500000208616257</y>
<z>0.6230000257492065</z>
<x>-0.34299999475479126</x>
<y>0.7509999871253967</y>
<z>-0.5640000104904175</z>
</rotation>
<rmsd>2.018903970718384</rmsd>
<dmax>4.046119213104248</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1B9O</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1B9OA</entryIDChain>
<sequence>IVEND--ESTEY</sequence>
<secondary-structure>EE -- EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 336 CA ILE A 41 13.403 29.495 29.777 1.00 18.66 C </line>
<line>ATOM 344 CA VAL A 42 14.428 27.611 26.595 1.00 18.57 C </line>
<line>ATOM 351 CA GLU A 43 16.817 29.516 24.342 1.00 27.22 C </line>
<line>ATOM 360 CA ASN A 44 16.928 28.627 20.674 1.00 40.56 C </line>
<line>ATOM 368 CA ASP A 45 19.066 30.153 17.923 1.00 40.42 C </line>
<line>ATOM 376 CA GLU A 46 16.712 32.958 16.954 1.00 30.89 C </line>
<line>ATOM 385 CA SER A 47 14.075 33.013 19.676 1.00 19.49 C </line>
<line>ATOM 391 CA THR A 48 13.425 32.221 23.329 1.00 14.32 C </line>
<line>ATOM 398 CA GLU A 49 10.411 30.536 24.925 1.00 13.93 C </line>
<line>ATOM 407 CA TYR A 50 9.244 31.568 28.350 1.00 11.49 C </line>
</atom-coordinate>
<distance-map>
<line> TYR GLU THR SER GLU ASP ASN GLU VAL ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 4.86 5.79 7.00 10.72 13.69 13.15 9.80 6.42 3.84 </line>
<line>VAL CA 6.75 5.24 5.74 8.79 11.26 10.16 6.51 3.80 </line>
<line>GLU CA 8.81 6.51 4.46 6.44 8.15 6.83 3.78 </line>
<line>ASN CA 11.25 8.01 5.68 5.33 5.71 3.80 </line>
<line>ASP CA 14.39 11.14 8.08 6.01 3.79 </line>
<line>GLU CA 13.70 10.45 7.21 3.79 </line>
<line>SER CA 10.03 6.86 3.79 </line>
<line>THR CA 6.57 3.80 </line>
<line>GLU CA 3.76 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>ILE CA 292</line>
<line>VAL CA 258</line>
<line>GLU CA 205</line>
<line>ASN CA 167</line>
<line>ASP CA 124</line>
<line>GLU CA 181</line>
<line>SER CA 247</line>
<line>THR CA 306</line>
<line>GLU CA 396</line>
<line>TYR CA 429</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1IP2</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1IP2A</entryIDChain>
<sequence>TNYNAADRSTDY</sequence>
<secondary-structure>EEEE EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 343 CA THR A 43 2.940 8.622 25.891 1.00 17.33 C </line>
<line>ATOM 350 CA ASN A 44 4.370 5.137 25.634 1.00 17.23 C </line>
<line>ATOM 358 CA TYR A 45 3.192 2.171 27.691 1.00 13.33 C </line>
<line>ATOM 370 CA ASN A 46 5.823 -0.471 28.399 1.00 13.70 C </line>
<line>ATOM 378 CA ALA A 47 3.882 -3.747 28.608 1.00 12.63 C </line>
<line>ATOM 383 CA ALA A 48 6.934 -5.603 29.855 1.00 10.69 C </line>
<line>ATOM 388 CA ASP A 49 7.076 -3.753 33.171 1.00 8.86 C </line>
<line>ATOM 396 CA ARG A 50 3.818 -1.825 33.509 1.00 12.54 C </line>
<line>ATOM 407 CA SER A 51 5.322 1.662 33.387 1.00 8.61 C </line>
<line>ATOM 413 CA THR A 52 4.621 4.488 30.939 1.00 6.57 C </line>
<line>ATOM 420 CA ASP A 53 6.840 7.208 29.419 1.00 5.97 C </line>
<line>ATOM 428 CA TYR A 54 5.339 10.728 29.383 1.00 5.97 C </line>
</atom-coordinate>
<distance-map>
<line> TYR ASP THR SER ARG ASP ALA ALA ASN TYR ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 4.73 5.45 6.74 10.50 12.96 14.94 15.30 12.70 9.86 6.70 3.78 </line>
<line>ASN CA 6.80 4.97 5.35 8.55 10.53 11.96 11.82 9.38 6.42 3.80 </line>
<line>TYR CA 8.98 6.45 4.24 6.10 7.09 8.96 8.89 6.03 3.80 </line>
<line>ASN CA 11.25 7.81 5.70 5.45 5.65 5.93 5.45 3.81 </line>
<line>ALA CA 14.57 11.38 8.59 7.36 5.26 5.57 3.78 </line>
<line>ALA CA 16.42 12.82 10.41 8.24 6.11 3.80 </line>
<line>ASP CA 15.07 11.59 8.88 5.70 3.80 </line>
<line>ARG CA 13.30 10.37 6.86 3.80 </line>
<line>SER CA 9.91 6.99 3.80 </line>
<line>THR CA 6.47 3.83 </line>
<line>ASP CA 3.83 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>THR CA 294</line>
<line>ASN CA 273</line>
<line>TYR CA 232</line>
<line>ASN CA 199</line>
<line>ALA CA 144</line>
<line>ALA CA 124</line>
<line>ASP CA 164</line>
<line>ARG CA 199</line>
<line>SER CA 264</line>
<line>THR CA 323</line>
<line>ASP CA 414</line>
<line>TYR CA 441</line>
</n14>
</entryChain>
<parallel>
<x>11.361000061035156</x>
<y>28.44499969482422</y>
<z>-6.8480000495910645</z>
</parallel>
<rotation>
<x>-0.6800000071525574</x>
<y>-0.5820000171661377</y>
<z>-0.44600000977516174</z>
<x>-0.6320000290870667</x>
<y>0.15600000321865082</y>
<z>0.7590000033378601</z>
<x>-0.3720000088214874</x>
<y>0.7979999780654907</y>
<z>-0.4740000069141388</z>
</rotation>
<rmsd>0.725013017654419</rmsd>
<dmax>1.2715519666671753</dmax>
</indel>