NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BU1C-1OOTA
confEVID 1BU1C-1OOTA
pdbIDA 1BU1
pdbIDB 1OOT
pdbChainA C
pdbChainB A
identity 0.372900009155273
indelSize 2
alignment <alignment>
<seq1>-IIVVALYDYEAIHHEDLSFQKGDQMVVLEES---GEWWKARSLATRKEGYIPSNYVARV</seq1>
<seq2>SPKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRV--NGREGIFPANYVELV</seq2>
<ss_1>- EEE EEEE EEE---EEEEEEEE EEEEEEE </ss_1>
<ss_2> EEE EEEE EEEEEEE-- EEEEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BU1</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1BU1C</entryIDChain>
<sequence>VLEES---GEWWK</sequence>
<secondary-structure> EEE---EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1155 CA VAL C 107 3.894 21.535 11.755 1.00 27.97 C </line>
<line>ATOM 1162 CA LEU C 108 3.258 25.114 12.876 1.00 40.12 C </line>
<line>ATOM 1170 CA GLU C 109 -0.543 25.081 12.466 1.00 50.47 C </line>
<line>ATOM 1179 CA GLU C 110 -2.960 22.228 11.698 1.00 51.54 C </line>
<line>ATOM 1188 CA SER C 111 -5.400 24.468 9.801 1.00 49.60 C </line>
<line>ATOM 1194 CA GLY C 112 -7.465 21.703 8.185 1.00 48.96 C </line>
<line>ATOM 1198 CA GLU C 113 -6.636 20.443 4.690 1.00 45.92 C </line>
<line>ATOM 1207 CA TRP C 114 -3.662 22.802 4.476 1.00 37.73 C </line>
<line>ATOM 1221 CA TRP C 115 -1.274 22.893 7.430 1.00 31.08 C </line>
<line>ATOM 1235 CA LYS C 116 1.313 25.610 7.973 1.00 27.25 C </line>
</atom-coordinate>
<distance-map>
<line> LYS TRP TRP GLU GLY SER GLU GLU LEU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 6.13 6.87 10.57 12.73 11.91 9.94 6.89 5.72 3.80 </line>
<line>LEU CA 5.30 7.43 11.13 13.66 12.19 9.21 6.96 3.82 </line>
<line>GLU CA 4.89 5.54 8.87 10.91 8.81 5.57 3.82 </line>
<line>GLU CA 6.60 4.64 7.28 8.11 5.74 3.82 </line>
<line>SER CA 7.05 5.01 5.84 6.62 3.81 </line>
<line>GLY CA 9.61 6.35 5.42 3.81 </line>
<line>GLU CA 10.03 6.50 3.80 </line>
<line>TRP CA 6.70 3.80 </line>
<line>TRP CA 3.79 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>VAL CA 309</line>
<line>LEU CA 254</line>
<line>GLU CA 224</line>
<line>GLU CA 224</line>
<line>SER CA 183</line>
<line>GLY CA 165</line>
<line>GLU CA 200</line>
<line>TRP CA 282</line>
<line>TRP CA 311</line>
<line>LYS CA 327</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1OOT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1OOTA</entryIDChain>
<sequence>ILKKSDSQNDWWT</sequence>
<secondary-structure> EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 234 CA AILE A 28 27.296 7.965 -2.964 0.50 11.82 C </line>
<line>ATOM 249 CA LEU A 29 27.690 9.939 -6.177 1.00 14.24 C </line>
<line>ATOM 257 CA LYS A 30 30.764 11.959 -5.173 1.00 13.36 C </line>
<line>ATOM 266 CA LYS A 31 33.102 11.629 -2.265 1.00 15.36 C </line>
<line>ATOM 275 CA SER A 32 36.224 13.447 -1.131 1.00 14.67 C </line>
<line>ATOM 281 CA ASP A 33 39.287 12.345 0.823 1.00 17.32 C </line>
<line>ATOM 289 CA SER A 34 37.729 13.385 4.149 1.00 14.38 C </line>
<line>ATOM 295 CA GLN A 35 34.703 12.088 5.911 1.00 15.60 C </line>
<line>ATOM 304 CA ASN A 36 34.223 15.582 7.383 1.00 13.71 C </line>
<line>ATOM 312 CA ASP A 37 33.352 17.118 4.040 1.00 12.06 C </line>
<line>ATOM 321 CA ATRP A 38 30.044 17.295 2.367 0.50 9.55 C </line>
<line>ATOM 348 CA TRP A 39 29.542 14.417 -0.042 1.00 11.08 C </line>
<line>ATOM 362 CA THR A 40 26.975 14.007 -2.809 1.00 10.29 C </line>
</atom-coordinate>
<distance-map>
<line> THR TRP TRP ASP ASN GLN SER ASP SER LYS LYS LEU ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 6.05 7.43 11.09 13.02 14.60 12.27 13.74 13.32 10.64 6.90 5.73 3.79 </line>
<line>LEU CA 5.33 7.82 11.52 13.71 16.07 14.14 14.81 13.76 10.52 6.89 3.81 </line>
<line>LYS CA 4.91 5.82 9.27 10.87 13.52 11.76 11.72 10.43 6.95 3.75 </line>
<line>LYS CA 6.59 5.04 7.93 8.36 10.49 8.34 8.10 6.95 3.79 </line>
<line>SER CA 9.42 6.84 8.08 6.96 9.00 7.33 5.49 3.80 </line>
<line>ASP CA 12.94 10.00 10.60 8.27 8.90 6.85 3.82 </line>
<line>SER CA 12.82 9.26 8.80 5.75 5.25 3.73 </line>
<line>GLN CA 11.81 8.22 7.83 5.53 3.82 </line>
<line>ASN CA 12.61 8.85 6.75 3.78 </line>
<line>ASP CA 9.86 6.20 3.71 </line>
<line>TRP CA 6.86 3.79 </line>
<line>TRP CA 3.80 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>ILE CA 317</line>
<line>LEU CA 244</line>
<line>LYS CA 246</line>
<line>LYS CA 254</line>
<line>SER CA 192</line>
<line>ASP CA 140</line>
<line>SER CA 167</line>
<line>GLN CA 237</line>
<line>ASN CA 195</line>
<line>ASP CA 208</line>
<line>TRP CA 284</line>
<line>TRP CA 327</line>
<line>THR CA 334</line>
</n14>
</entryChain>
<parallel>
<x>-34.0260009765625</x>
<y>9.805000305175781</y>
<z>9.982999801635742</z>
</parallel>
<rotation>
<x>-0.8629999756813049</x>
<y>0.2160000056028366</y>
<z>0.4569999873638153</z>
<x>-0.27399998903274536</x>
<y>0.5600000023841858</y>
<z>-0.7820000052452087</z>
<x>-0.42500001192092896</x>
<y>-0.800000011920929</y>
<z>-0.42399999499320984</z>
</rotation>
<rmsd>2.0220730304718018</rmsd>
<dmax>4.355419158935547</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1OOT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1OOTA</entryIDChain>
<sequence>WTGRV--NGREG</sequence>
<secondary-structure>EEEEE-- EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 348 CA TRP A 39 29.542 14.417 -0.042 1.00 11.08 C </line>
<line>ATOM 362 CA THR A 40 26.975 14.007 -2.809 1.00 10.29 C </line>
<line>ATOM 369 CA GLY A 41 24.388 11.265 -2.771 1.00 11.54 C </line>
<line>ATOM 373 CA ARG A 42 20.849 10.134 -3.329 1.00 11.53 C </line>
<line>ATOM 384 CA VAL A 43 18.123 8.330 -1.442 1.00 10.45 C </line>
<line>ATOM 391 CA ASN A 44 14.332 8.377 -1.332 1.00 13.67 C </line>
<line>ATOM 399 CA GLY A 45 14.145 9.895 -4.799 1.00 11.79 C </line>
<line>ATOM 403 CA ARG A 46 16.115 12.989 -3.764 1.00 12.10 C </line>
<line>ATOM 414 CA GLU A 47 19.630 14.058 -4.665 1.00 12.05 C </line>
<line>ATOM 423 CA GLY A 48 21.940 16.436 -2.885 1.00 12.85 C </line>
</atom-coordinate>
<distance-map>
<line> GLY GLU ARG GLY ASN VAL ARG GLY THR TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 8.36 10.94 14.01 16.74 16.42 13.02 10.23 6.63 3.80 </line>
<line>THR CA 5.59 7.58 10.95 13.62 13.92 10.60 7.27 3.77 </line>
<line>GLY CA 5.72 5.83 8.51 10.53 10.56 7.04 3.76 </line>
<line>ARG CA 6.41 4.32 5.55 6.87 7.04 3.77 </line>
<line>VAL CA 9.08 6.74 5.58 5.44 3.79 </line>
<line>ASN CA 11.19 8.45 5.51 3.79 </line>
<line>GLY CA 10.35 6.89 3.81 </line>
<line>ARG CA 6.83 3.78 </line>
<line>GLU CA 3.76 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 327</line>
<line>THR CA 334</line>
<line>GLY CA 348</line>
<line>ARG CA 299</line>
<line>VAL CA 274</line>
<line>ASN CA 200</line>
<line>GLY CA 152</line>
<line>ARG CA 213</line>
<line>GLU CA 243</line>
<line>GLY CA 271</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BU1</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1BU1C</entryIDChain>
<sequence>WKARSLATRKEG</sequence>
<secondary-structure>EEEEE EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1221 CA TRP C 115 -1.274 22.893 7.430 1.00 31.08 C </line>
<line>ATOM 1235 CA LYS C 116 1.313 25.610 7.973 1.00 27.25 C </line>
<line>ATOM 1244 CA ALA C 117 4.777 24.061 8.266 1.00 23.45 C </line>
<line>ATOM 1249 CA ARG C 118 8.476 24.789 8.316 1.00 17.07 C </line>
<line>ATOM 1260 CA SER C 119 11.102 22.813 6.450 1.00 15.09 C </line>
<line>ATOM 1266 CA LEU C 120 13.768 21.669 8.919 1.00 16.09 C </line>
<line>ATOM 1274 CA ALA C 121 16.582 21.920 6.375 1.00 17.90 C </line>
<line>ATOM 1279 CA THR C 122 15.691 25.164 4.661 1.00 20.98 C </line>
<line>ATOM 1286 CA ARG C 123 13.750 26.739 7.581 1.00 25.71 C </line>
<line>ATOM 1297 CA LYS C 124 11.341 28.093 4.933 1.00 28.01 C </line>
<line>ATOM 1306 CA GLU C 125 7.711 28.248 6.050 1.00 28.54 C </line>
<line>ATOM 1315 CA GLY C 126 4.493 27.742 4.125 1.00 27.27 C </line>
</atom-coordinate>
<distance-map>
<line> GLY GLU LYS ARG THR ALA LEU SER ARG ALA LYS TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 8.23 10.55 13.87 15.51 17.34 17.91 15.16 12.41 9.97 6.22 3.79 </line>
<line>LYS CA 5.43 7.18 10.77 12.49 14.76 15.79 13.10 10.29 7.22 3.81 </line>
<line>ALA CA 5.55 5.57 8.39 9.39 11.55 12.15 9.33 6.70 3.77 </line>
<line>ARG CA 6.49 4.21 5.53 5.67 8.10 8.82 6.17 3.78 </line>
<line>SER CA 8.57 6.42 5.50 4.87 5.46 5.55 3.81 </line>
<line>LEU CA 12.08 9.39 7.94 5.24 5.83 3.80 </line>
<line>ALA CA 13.61 10.90 8.23 5.72 3.78 </line>
<line>THR CA 11.50 8.67 5.25 3.84 </line>
<line>ARG CA 9.93 6.41 3.83 </line>
<line>LYS CA 6.90 3.80 </line>
<line>GLU CA 3.78 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 311</line>
<line>LYS CA 327</line>
<line>ALA CA 364</line>
<line>ARG CA 310</line>
<line>SER CA 296</line>
<line>LEU CA 219</line>
<line>ALA CA 176</line>
<line>THR CA 168</line>
<line>ARG CA 183</line>
<line>LYS CA 225</line>
<line>GLU CA 275</line>
<line>GLY CA 330</line>
</n14>
</entryChain>
<parallel>
<x>12.411999702453613</x>
<y>-13.843999862670898</y>
<z>-9.487000465393066</z>
</parallel>
<rotation>
<x>-0.8669999837875366</x>
<y>-0.48100000619888306</y>
<z>-0.12600000202655792</z>
<x>-0.3179999887943268</x>
<y>0.7310000061988831</y>
<z>-0.6039999723434448</z>
<x>0.382999986410141</x>
<y>-0.48399999737739563</y>
<z>-0.7870000004768372</z>
</rotation>
<rmsd>0.7880399823188782</rmsd>
<dmax>1.367961049079895</dmax>
</indel>