NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BFXA-1I87A
confEVID 1BFXA-1I87A
pdbIDA 1BFX
pdbIDB 1I87
pdbChainA A
pdbChainB A
identity 0.613200008869171
indelSize 1
alignment <alignment>
<seq1>DKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQA-GGDATENFEDVGHS-----------TDARELSKTYIIGELHPDDRSKIAKPSETL</seq1>
<seq2>DKDVKYYTLEEIQKHKDSKSTWVILHHKVYDL------------TKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHPDDRSKIAKPSETL</seq2>
<ss_1> HHHHHH EEEEEEEEEEEE HHHH HHHHHH - HHHHHHH ----------- HHHHHHHH EE HHHH </ss_1>
<ss_2> HHHH EEEEEE------------HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BFX</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BFXA</entryIDChain>
<sequence>LREQA-GGDAT</sequence>
<secondary-structure>HHHH - H</secondary-structure>
<atom-coordinate>
<line>ATOM 755 CA LEU A 46 4.062 -4.427 5.638 1.00 0.00 C </line>
<line>ATOM 774 CA ARG A 47 6.509 -6.714 3.845 1.00 0.00 C </line>
<line>ATOM 798 CA GLU A 48 4.159 -9.678 4.508 1.00 0.00 C </line>
<line>ATOM 813 CA GLN A 49 1.284 -7.631 3.039 1.00 0.00 C </line>
<line>ATOM 830 CA ALA A 50 3.479 -6.278 0.166 1.00 0.00 C </line>
<line>ATOM 840 CA GLY A 51 1.694 -6.335 -3.217 1.00 0.00 C </line>
<line>ATOM 847 CA GLY A 52 -1.304 -7.983 -1.460 1.00 0.00 C </line>
<line>ATOM 854 CA ASP A 53 -4.392 -6.499 0.204 1.00 0.00 C </line>
<line>ATOM 866 CA ALA A 54 -3.472 -4.694 3.380 1.00 0.00 C </line>
<line>ATOM 876 CA THR A 55 -6.582 -2.514 3.836 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> THR ALA ASP GLY GLY ALA GLN GLU ARG LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 10.96 7.87 10.26 9.58 9.36 5.81 4.97 5.37 3.80 </line>
<line>ARG CA 13.75 10.19 11.49 9.53 8.56 4.79 5.37 3.84 </line>
<line>GLU CA 12.93 9.18 10.09 8.27 8.77 5.56 3.82 </line>
<line>GLN CA 9.42 5.60 6.44 5.20 6.40 3.86 </line>
<line>ALA CA 11.35 7.82 7.87 5.33 3.83 </line>
<line>GLY CA 11.53 8.54 6.98 3.85 </line>
<line>GLY CA 9.26 6.24 3.81 </line>
<line>ASP CA 5.82 3.77 </line>
<line>ALA CA 3.83 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>LEU CA 641</line>
<line>ARG CA 551</line>
<line>GLU CA 459</line>
<line>GLN CA 618</line>
<line>ALA CA 678</line>
<line>GLY CA 727</line>
<line>GLY CA 690</line>
<line>ASP CA 728</line>
<line>ALA CA 716</line>
<line>THR CA 654</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1I87</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1I87A</entryIDChain>
<sequence>KFLEEHPGGEE</sequence>
<secondary-structure>HHH </secondary-structure>
<atom-coordinate>
<line>ATOM 575 CA LYS A 34 11.004 5.854 5.428 1.00 0.00 C </line>
<line>ATOM 597 CA PHE A 35 11.622 3.324 2.616 1.00 0.00 C </line>
<line>ATOM 617 CA LEU A 36 11.364 5.982 -0.134 1.00 0.00 C </line>
<line>ATOM 636 CA GLU A 37 14.548 7.563 1.293 1.00 0.00 C </line>
<line>ATOM 651 CA GLU A 38 16.206 4.197 2.063 1.00 0.00 C </line>
<line>ATOM 666 CA HIS A 39 16.940 2.671 -1.372 1.00 0.00 C </line>
<line>ATOM 683 CA PRO A 40 17.464 5.589 -3.807 1.00 0.00 C </line>
<line>ATOM 697 CA GLY A 41 16.162 3.879 -6.980 1.00 0.00 C </line>
<line>ATOM 704 CA GLY A 42 12.696 5.280 -7.804 1.00 0.00 C </line>
<line>ATOM 711 CA GLU A 43 11.089 6.461 -4.520 1.00 0.00 C </line>
<line>ATOM 726 CA GLU A 44 8.026 4.133 -4.720 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> GLU GLU GLY GLY PRO HIS GLU GLU LEU PHE LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 10.72 9.97 13.35 13.58 11.27 9.57 6.41 5.71 5.58 3.83 </line>
<line>PHE CA 8.21 7.81 10.66 10.63 8.97 6.68 4.70 5.32 3.83 </line>
<line>LEU CA 5.97 4.42 7.82 8.62 7.13 6.60 5.61 3.83 </line>
<line>GLU CA 9.51 6.85 9.56 9.20 6.20 6.06 3.83 </line>
<line>GLU CA 10.63 8.64 10.53 9.05 6.16 3.83 </line>
<line>HIS CA 9.63 7.65 8.14 5.79 3.84 </line>
<line>PRO CA 9.59 6.47 6.23 3.83 </line>
<line>GLY CA 8.45 6.20 3.83 </line>
<line>GLY CA 5.71 3.84 </line>
<line>GLU CA 3.85 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>LYS CA 508</line>
<line>PHE CA 608</line>
<line>LEU CA 555</line>
<line>GLU CA 389</line>
<line>GLU CA 423</line>
<line>HIS CA 415</line>
<line>PRO CA 318</line>
<line>GLY CA 322</line>
<line>GLY CA 380</line>
<line>GLU CA 496</line>
<line>GLU CA 642</line>
</n14>
</entryChain>
<parallel>
<x>-11.946999549865723</x>
<y>-12.152000427246094</y>
<z>2.50600004196167</z>
</parallel>
<rotation>
<x>0.23000000417232513</x>
<y>0.45100000500679016</y>
<z>-0.8629999756813049</z>
<x>-0.4189999997615814</x>
<y>0.8460000157356262</y>
<z>0.33000001311302185</z>
<x>0.8790000081062317</x>
<y>0.2849999964237213</y>
<z>0.382999986410141</z>
</rotation>
<rmsd>2.8196330070495605</rmsd>
<dmax>4.035055160522461</dmax>
</indel>