NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BFOE-1QLRC
confEVID 1BFOE-1QLRC
pdbIDA 1BFO
pdbIDB 1QLR
pdbChainA E
pdbChainB C
identity 0.597199976444244
indelSize 3
alignment <alignment>
<seq1>DIKMTQSPSFLSASVGDRVTLNCKASQNI-DKYLNWYQQKLGESPKLLIYNTNNLQTGIPSRFSGSGSGTDFTLTISSLQPEDVATYFCLQHISRPRTFGTGTKLELKRANAAPTVSIFPPSTEQLATGGASVVCLMNKFYPRDISVKWKIDGTERN-GVLNSVTDQDSADSTYSMSSTLSLTKADYQSHNLYTCQVVHKTSSSPVVAKNFNRNEC</seq1>
<seq2>EIVLTQSPATLSLSPGERATLSCGASQSVSSNYLAWYQQKPGQAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQ-GLSSPVTKSFNRGEC</seq2>
<ss_1> EEE EEEE EEEEEE - EEEEEEE EEEEE EEE EEEEEEEEEEEEEEE EEEEEEE EEEEEE EEEEE HHHH EEEEEEEEEEEEE EEEEEE -EEEEE EEEEEEEEEEEHHHH EEEEEEEEE EEEEEEE </ss_1>
<ss_2> EEEEE EEE EEEEEE GGGEEEEEEE EEEEE EEE EEEEEEEEEEEEEEE EEEEEEE EEEE EEEEE HHHH EEEEEEEEEEEEE EEEEE EEEEE EEEEEEEEEEEHHHH EEEEEEEE - EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BFO</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1BFOE</entryIDChain>
<sequence>ASQNI-DKYLN</sequence>
<secondary-structure> - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 6753 CA ALA E 25 22.801 7.454 17.288 1.00 51.93 C </line>
<line>ATOM 6758 CA SER E 26 24.649 4.267 16.156 1.00 37.07 C </line>
<line>ATOM 6764 CA GLN E 27 23.211 2.412 19.167 1.00 45.44 C </line>
<line>ATOM 6773 CA ASN E 28 20.696 2.777 21.922 1.00 47.05 C </line>
<line>ATOM 6781 CA ILE E 29 22.156 5.512 24.115 1.00 41.51 C </line>
<line>ATOM 6789 CA ASP E 30 19.150 5.566 26.339 1.00 30.61 C </line>
<line>ATOM 6797 CA LYS E 31 18.720 9.149 27.845 1.00 29.10 C </line>
<line>ATOM 6806 CA TYR E 32 22.480 10.050 28.042 1.00 48.24 C </line>
<line>ATOM 6818 CA LEU E 33 22.592 12.684 25.321 1.00 31.79 C </line>
<line>ATOM 6826 CA ASN E 34 23.246 16.446 25.314 1.00 29.13 C </line>
</atom-coordinate>
<distance-map>
<line> ASN LEU TYR LYS ASP ILE ASN GLN SER ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 12.06 9.59 11.07 11.44 9.94 7.13 6.91 5.40 3.85 </line>
<line>SER CA 15.30 12.61 13.39 13.99 11.65 8.43 7.15 3.82 </line>
<line>GLN CA 15.32 11.99 11.73 11.87 8.82 5.93 3.75 </line>
<line>ASN CA 14.31 10.64 9.67 8.92 5.45 3.80 </line>
<line>ILE CA 11.05 7.29 6.01 6.24 3.74 </line>
<line>ASP CA 11.67 7.97 5.84 3.91 </line>
<line>LYS CA 8.95 5.82 3.87 </line>
<line>TYR CA 7.00 3.79 </line>
<line>LEU CA 3.82 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>ALA CA 329</line>
<line>SER CA 241</line>
<line>GLN CA 229</line>
<line>ASN CA 225</line>
<line>ILE CA 298</line>
<line>ASP CA 253</line>
<line>LYS CA 287</line>
<line>TYR CA 346</line>
<line>LEU CA 425</line>
<line>ASN CA 457</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1QLRC</entryIDChain>
<sequence>ASQSVSSNYLA</sequence>
<secondary-structure> GGGEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 3418 CA ALA C 25 -22.967 93.004 120.513 1.00 31.69 C </line>
<line>ATOM 3423 CA SER C 26 -20.453 95.838 119.773 1.00 37.19 C </line>
<line>ATOM 3429 CA GLN C 27 -22.566 98.312 121.703 1.00 39.44 C </line>
<line>ATOM 3438 CA SER C 28 -25.089 97.659 124.439 1.00 38.16 C </line>
<line>ATOM 3444 CA VAL C 29 -28.594 96.924 123.284 1.00 32.85 C </line>
<line>ATOM 3451 CA SER C 30 -31.466 98.925 124.719 1.00 35.54 C </line>
<line>ATOM 3457 CA SER C 30A -33.981 97.166 126.920 1.00 36.53 C </line>
<line>ATOM 3463 CA ASN C 31 -32.756 93.652 126.143 1.00 36.11 C </line>
<line>ATOM 3471 CA TYR C 32 -34.411 93.906 122.769 1.00 27.33 C </line>
<line>ATOM 3483 CA LEU C 33 -32.745 90.822 121.351 1.00 19.68 C </line>
<line>ATOM 3491 CA ALA C 34 -34.359 87.777 119.585 1.00 18.14 C </line>
</atom-coordinate>
<distance-map>
<line> ALA LEU TYR ASN SER SER VAL SER GLN SER ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 12.57 10.05 11.70 11.31 13.40 11.18 7.40 6.45 5.45 3.86 </line>
<line>SER CA 16.07 13.37 14.41 14.03 15.36 12.46 8.93 6.82 3.78 </line>
<line>GLN CA 15.95 12.64 12.68 12.05 12.60 9.42 6.38 3.78 </line>
<line>SER CA 14.39 10.72 10.19 8.82 9.24 6.51 3.76 </line>
<line>VAL CA 11.43 7.63 6.57 6.02 6.50 3.78 </line>
<line>SER CA 12.61 8.87 6.14 5.61 3.78 </line>
<line>SER CA 11.92 8.53 5.30 3.80 </line>
<line>ASN CA 8.95 5.57 3.77 </line>
<line>TYR CA 6.91 3.78 </line>
<line>LEU CA 3.87 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>ALA CA 305</line>
<line>SER CA 211</line>
<line>GLN CA 212</line>
<line>SER CA 224</line>
<line>VAL CA 277</line>
<line>SER CA 224</line>
<line>SER CA 196</line>
<line>ASN CA 273</line>
<line>TYR CA 319</line>
<line>LEU CA 390</line>
<line>ALA CA 434</line>
</n14>
</entryChain>
<parallel>
<x>49.334999084472656</x>
<y>-89.90899658203125</y>
<z>-100.58399963378906</z>
</parallel>
<rotation>
<x>-0.0560000017285347</x>
<y>-0.3499999940395355</y>
<z>-0.9350000023841858</z>
<x>0.2460000067949295</x>
<y>-0.9120000004768372</y>
<z>0.3269999921321869</z>
<x>-0.9679999947547913</x>
<y>-0.21199999749660492</y>
<z>0.1379999965429306</z>
</rotation>
<rmsd>1.3189079761505127</rmsd>
<dmax>3.2533650398254395</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1BFO</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1BFOE</entryIDChain>
<sequence>GTERN-GVLNS</sequence>
<secondary-structure> -EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 7743 CA GLY E 152 36.845 46.057 -18.304 1.00 55.95 C </line>
<line>ATOM 7747 CA THR E 153 38.567 42.661 -18.211 1.00 59.49 C </line>
<line>ATOM 7754 CA GLU E 154 37.360 40.031 -15.685 1.00 52.35 C </line>
<line>ATOM 7763 CA ARG E 155 40.338 39.028 -13.554 1.00 53.04 C </line>
<line>ATOM 7774 CA ASN E 156 41.731 36.296 -11.284 1.00 52.43 C </line>
<line>ATOM 7782 CA GLY E 157 44.351 36.359 -8.499 1.00 55.75 C </line>
<line>ATOM 7786 CA VAL E 158 41.473 37.153 -6.114 1.00 47.64 C </line>
<line>ATOM 7793 CA LEU E 159 40.588 36.276 -2.508 1.00 41.25 C </line>
<line>ATOM 7801 CA ASN E 160 37.108 36.223 -1.010 1.00 34.90 C </line>
<line>ATOM 7809 CA SER E 161 35.830 36.030 2.515 1.00 13.33 C </line>
</atom-coordinate>
<distance-map>
<line> SER ASN LEU VAL GLY ASN ARG GLU THR GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 23.13 19.90 18.95 15.79 15.70 12.98 9.17 6.59 3.81 </line>
<line>THR CA 21.93 18.42 17.07 13.61 12.94 9.93 6.17 3.84 </line>
<line>GLU CA 18.70 15.16 14.08 10.81 10.68 7.24 3.80 </line>
<line>ARG CA 16.96 13.25 11.39 7.76 6.98 3.82 </line>
<line>ASN CA 15.01 11.27 8.85 5.25 3.82 </line>
<line>GLY CA 13.93 10.42 7.08 3.82 </line>
<line>VAL CA 10.37 6.78 3.82 </line>
<line>LEU CA 6.92 3.79 </line>
<line>ASN CA 3.75 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>GLY CA 218</line>
<line>THR CA 206</line>
<line>GLU CA 232</line>
<line>ARG CA 259</line>
<line>ASN CA 234</line>
<line>GLY CA 222</line>
<line>VAL CA 263</line>
<line>LEU CA 222</line>
<line>ASN CA 259</line>
<line>SER CA 233</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1QLRC</entryIDChain>
<sequence>NALQSGNSQES</sequence>
<secondary-structure> EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 4408 CA ASN C 152 3.144 66.598 89.746 1.00 87.88 C </line>
<line>ATOM 4416 CA ALA C 153 2.895 70.353 89.071 1.00 88.46 C </line>
<line>ATOM 4421 CA LEU C 154 0.678 71.393 91.977 1.00 88.86 C </line>
<line>ATOM 4429 CA GLN C 155 -2.228 73.191 90.301 1.00 84.96 C </line>
<line>ATOM 4438 CA SER C 156 -3.997 76.272 91.647 1.00 84.09 C </line>
<line>ATOM 4444 CA GLY C 157 -6.882 78.708 91.116 1.00 80.69 C </line>
<line>ATOM 4448 CA ASN C 158 -8.742 76.489 88.632 1.00 75.47 C </line>
<line>ATOM 4456 CA SER C 159 -10.849 74.100 90.750 1.00 65.55 C </line>
<line>ATOM 4462 CA GLN C 160 -14.188 74.404 92.492 1.00 57.81 C </line>
<line>ATOM 4471 CA GLU C 161 -15.501 72.379 95.376 1.00 51.36 C </line>
<line>ATOM 4480 CA SER C 162 -18.960 71.758 96.650 1.00 39.85 C </line>
</atom-coordinate>
<distance-map>
<line> SER GLU GLN SER ASN GLY SER GLN LEU ALA ASN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASN CA 23.73 20.32 19.21 15.91 15.50 15.78 12.17 8.52 5.84 3.82 </line>
<line>ALA CA 23.17 19.55 17.89 14.34 13.16 13.02 9.44 5.98 3.80 </line>
<line>LEU CA 20.19 16.56 15.18 11.90 11.22 10.55 6.77 3.81 </line>
<line>GLN CA 17.95 14.23 12.22 8.68 7.49 7.26 3.80 </line>
<line>SER CA 16.41 12.70 10.40 7.24 5.63 3.81 </line>
<line>GLY CA 14.99 11.51 8.59 6.09 3.81 </line>
<line>ASN CA 13.82 10.40 6.99 3.83 </line>
<line>SER CA 10.30 6.78 3.78 </line>
<line>GLN CA 6.86 3.76 </line>
<line>GLU CA 3.74 </line>
<line>SER CA </line>
</distance-map>
<n14>
<line>ASN CA 203</line>
<line>ALA CA 193</line>
<line>LEU CA 215</line>
<line>GLN CA 252</line>
<line>SER CA 201</line>
<line>GLY CA 155</line>
<line>ASN CA 221</line>
<line>SER CA 262</line>
<line>GLN CA 217</line>
<line>GLU CA 261</line>
<line>SER CA 220</line>
</n14>
</entryChain>
<parallel>
<x>44.31700134277344</x>
<y>-33.617000579833984</y>
<z>-102.34700012207031</z>
</parallel>
<rotation>
<x>-0.16200000047683716</x>
<y>0.0949999988079071</y>
<z>-0.9819999933242798</z>
<x>0.4909999966621399</x>
<y>-0.8550000190734863</y>
<z>-0.164000004529953</z>
<x>-0.8560000061988831</x>
<y>-0.5090000033378601</y>
<z>0.09200000017881393</z>
</rotation>
<rmsd>0.7575100064277649</rmsd>
<dmax>1.481497049331665</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1QLRC</entryIDChain>
<sequence>EVTHQ-GLSSP</sequence>
<secondary-structure>EEE - </secondary-structure>
<atom-coordinate>
<line>ATOM 4737 CA GLU C 195 -4.575 64.033 96.350 1.00 49.06 C </line>
<line>ATOM 4746 CA VAL C 196 -6.645 63.969 99.537 1.00 47.54 C </line>
<line>ATOM 4753 CA THR C 197 -5.779 64.738 103.167 1.00 49.34 C </line>
<line>ATOM 4760 CA HIS C 198 -8.258 63.915 105.944 1.00 46.85 C </line>
<line>ATOM 4770 CA GLN C 199 -7.767 63.371 109.682 1.00 52.95 C </line>
<line>ATOM 4779 CA GLY C 200 -9.046 59.722 109.396 1.00 51.94 C </line>
<line>ATOM 4783 CA LEU C 201 -6.181 59.065 106.976 1.00 57.13 C </line>
<line>ATOM 4791 CA SER C 202 -2.618 58.476 108.252 1.00 62.17 C </line>
<line>ATOM 4797 CA SER C 203 -1.141 59.883 105.058 1.00 58.93 C </line>
<line>ATOM 4803 CA PRO C 204 -2.673 61.388 101.959 1.00 55.69 C </line>
</atom-coordinate>
<distance-map>
<line> PRO SER SER LEU GLY GLN HIS THR VAL GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 6.49 10.24 13.28 11.84 14.45 13.72 10.28 6.96 3.80 </line>
<line>VAL CA 5.32 8.80 11.06 8.92 11.00 10.22 6.61 3.81 </line>
<line>THR CA 4.73 6.98 8.66 6.84 8.64 6.95 3.81 </line>
<line>HIS CA 7.31 8.23 8.17 5.38 5.49 3.81 </line>
<line>GLN CA 9.46 8.80 7.25 5.33 3.88 </line>
<line>GLY CA 9.93 9.02 6.65 3.81 </line>
<line>LEU CA 6.55 5.45 3.83 </line>
<line>SER CA 6.93 3.79 </line>
<line>SER CA 3.77 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>GLU CA 355</line>
<line>VAL CA 346</line>
<line>THR CA 281</line>
<line>HIS CA 280</line>
<line>GLN CA 221</line>
<line>GLY CA 218</line>
<line>LEU CA 209</line>
<line>SER CA 130</line>
<line>SER CA 151</line>
<line>PRO CA 207</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BFO</pdbID>
<pdbChain>E</pdbChain>
<entryIDChain>1BFOE</entryIDChain>
<sequence>QVVHKTSSSPV</sequence>
<secondary-structure>EEEE </secondary-structure>
<atom-coordinate>
<line>ATOM 8060 CA GLN E 194 30.986 44.280 -9.822 1.00 35.55 C </line>
<line>ATOM 8069 CA VAL E 195 28.598 42.441 -7.602 1.00 36.04 C </line>
<line>ATOM 8076 CA VAL E 196 25.519 40.641 -8.688 1.00 49.99 C </line>
<line>ATOM 8083 CA HIS E 197 22.982 39.980 -5.978 1.00 46.86 C </line>
<line>ATOM 8093 CA LYS E 198 20.804 37.271 -7.474 1.00 81.43 C </line>
<line>ATOM 8102 CA THR E 199 17.870 39.209 -6.077 1.00 57.62 C </line>
<line>ATOM 8109 CA SER E 200 17.939 42.810 -4.920 1.00 49.32 C </line>
<line>ATOM 8115 CA SER E 201 18.737 44.192 -8.389 1.00 56.09 C </line>
<line>ATOM 8121 CA SER E 202 19.216 43.250 -12.038 1.00 77.83 C </line>
<line>ATOM 8127 CA PRO E 203 21.506 45.992 -13.428 1.00 80.83 C </line>
<line>ATOM 8134 CA VAL E 204 24.254 44.667 -11.106 1.00 60.20 C </line>
</atom-coordinate>
<distance-map>
<line> VAL PRO SER SER SER THR LYS HIS VAL VAL GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 6.86 10.29 12.02 12.33 14.01 14.55 12.58 9.87 6.66 3.74 </line>
<line>VAL CA 6.01 9.84 10.41 10.05 11.00 11.31 9.35 6.34 3.73 </line>
<line>VAL CA 4.86 8.20 7.60 7.66 8.74 8.21 5.92 3.77 </line>
<line>HIS CA 7.06 9.69 7.85 6.45 5.88 5.17 3.78 </line>
<line>LYS CA 8.93 10.58 7.69 7.28 6.74 3.78 </line>
<line>THR CA 9.79 10.64 7.33 5.56 3.78 </line>
<line>SER CA 9.03 9.76 7.25 3.82 </line>
<line>SER CA 6.17 6.02 3.80 </line>
<line>SER CA 5.32 3.83 </line>
<line>PRO CA 3.83 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>GLN CA 375</line>
<line>VAL CA 382</line>
<line>VAL CA 295</line>
<line>HIS CA 290</line>
<line>LYS CA 210</line>
<line>THR CA 204</line>
<line>SER CA 225</line>
<line>SER CA 189</line>
<line>SER CA 144</line>
<line>PRO CA 144</line>
<line>VAL CA 224</line>
</n14>
</entryChain>
<parallel>
<x>-29.45599937438965</x>
<y>20.30299949645996</y>
<z>113.0270004272461</z>
</parallel>
<rotation>
<x>0.017999999225139618</x>
<y>0.4909999966621399</y>
<z>-0.8709999918937683</z>
<x>-0.003000000026077032</x>
<y>-0.8709999918937683</y>
<z>-0.4909999966621399</z>
<x>-1.0</x>
<y>0.012000000104308128</y>
<z>-0.014000000432133675</z>
</rotation>
<rmsd>0.9973539710044861</rmsd>
<dmax>1.9013190269470215</dmax>
</indel>