NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BFVH-1QLRB
confEVID 1BFVH-1QLRB
pdbIDA 1BFV
pdbIDB 1QLR
pdbChainA H
pdbChainB B
identity 0.296700000762939
indelSize 2
alignment <alignment>
<seq1>QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLN--YAVYGMDYWGQGTTVT-------------------------------------------------------------VSS----------------------------</seq1>
<seq2>EVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSG-STNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPTDEHVVCKVQHPNGNKEKNVPLPV</seq2>
<ss_1> EEEEE EEEE EEEEEEEE GGG EEEEEEEE EEE EEE EEEEEEE EEEEEEE GGG EEEEEEEEE-- EEEE-------------------------------------------------------------EE ----------------------------</ss_1>
<ss_2> EEEEE EEEEEEEE EEEEEE EEEEEEE -EEEEE EEEEEEE EEEEEEE GGG EEEEEEE EEEE EEEEE EEEEEEEEE EEEEEEE EEE EEE EEEEEEEE EEEEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BFV</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1BFVH</entryIDChain>
<sequence>CARLN--YAVYG</sequence>
<secondary-structure>EEEEE-- </secondary-structure>
<atom-coordinate>
<line>ATOM 1613 CA CYS H 96 74.088 31.594 13.219 1.00 14.21 C </line>
<line>ATOM 1619 CA ALA H 97 72.863 28.228 11.856 1.00 13.81 C </line>
<line>ATOM 1624 CA ARG H 98 70.346 27.541 9.108 1.00 12.47 C </line>
<line>ATOM 1635 CA LEU H 99 67.365 25.282 9.818 1.00 15.97 C </line>
<line>ATOM 1643 CA ASN H 100 66.728 22.365 7.404 1.00 15.12 C </line>
<line>ATOM 1651 CA TYR H 101 63.221 21.077 6.811 1.00 15.39 C </line>
<line>ATOM 1663 CA ALA H 102 64.388 17.470 6.197 1.00 15.79 C </line>
<line>ATOM 1668 CA VAL H 103 66.743 17.483 9.222 1.00 12.85 C </line>
<line>ATOM 1675 CA TYR H 104 64.267 19.327 11.480 1.00 10.67 C </line>
<line>ATOM 1687 CA GLY H 105 67.497 20.912 12.720 1.00 9.80 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR VAL ALA TYR ASN LEU ARG ALA CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 12.56 15.81 16.40 18.52 16.42 13.16 9.83 6.88 3.83 </line>
<line>ALA CA 9.11 12.38 12.64 14.82 13.02 9.58 6.56 3.79 </line>
<line>ARG CA 8.07 10.49 10.68 12.06 9.89 6.54 3.81 </line>
<line>LEU CA 5.25 6.92 7.85 9.11 6.63 3.84 </line>
<line>ASN CA 5.56 5.65 5.21 5.56 3.78 </line>
<line>TYR CA 7.30 5.09 5.58 3.84 </line>
<line>ALA CA 8.00 5.60 3.83 </line>
<line>VAL CA 4.96 3.82 </line>
<line>TYR CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>CYS CA 496</line>
<line>ALA CA 467</line>
<line>ARG CA 440</line>
<line>LEU CA 365</line>
<line>ASN CA 255</line>
<line>TYR CA 195</line>
<line>ALA CA 128</line>
<line>VAL CA 151</line>
<line>TYR CA 178</line>
<line>GLY CA 247</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1QLRB</entryIDChain>
<sequence>CARPPHDTSGHY</sequence>
<secondary-structure>EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 2375 CA CYS B 95 0.064 18.147 42.339 1.00 20.07 C </line>
<line>ATOM 2381 CA ALA B 96 -0.377 17.151 38.692 1.00 18.99 C </line>
<line>ATOM 2386 CA ARG B 97 0.006 14.506 35.997 1.00 20.07 C </line>
<line>ATOM 2397 CA PRO B 98 0.879 14.443 32.304 1.00 22.38 C </line>
<line>ATOM 2404 CA PRO B 99 -1.596 12.851 29.848 1.00 23.85 C </line>
<line>ATOM 2411 CA HIS B 100 0.690 9.959 28.683 1.00 28.42 C </line>
<line>ATOM 2421 CA ASP B 101 3.719 7.966 29.831 1.00 43.97 C </line>
<line>ATOM 2429 CA THR B 102 5.702 8.581 26.668 1.00 49.14 C </line>
<line>ATOM 2436 CA SER B 103 5.498 12.290 26.035 1.00 44.10 C </line>
<line>ATOM 2442 CA GLY B 104 6.049 15.877 26.931 1.00 32.86 C </line>
<line>ATOM 2446 CA HIS B 105 5.837 16.741 30.588 1.00 22.00 C </line>
<line>ATOM 2456 CA TYR B 106 2.912 19.180 30.297 1.00 20.70 C </line>
</atom-coordinate>
<distance-map>
<line> TYR HIS GLY SER THR ASP HIS PRO PRO ARG ALA CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 12.42 13.17 16.68 18.16 19.21 16.54 15.93 13.67 10.73 7.31 3.81 </line>
<line>ALA CA 9.24 10.22 13.46 14.78 15.97 13.40 12.37 9.91 7.05 3.80 </line>
<line>ARG CA 7.92 8.26 10.98 11.59 12.43 9.73 8.64 6.57 3.80 </line>
<line>PRO CA 5.53 5.73 7.59 8.08 9.45 7.49 5.77 3.83 </line>
<line>PRO CA 7.78 8.42 8.72 8.07 9.03 7.22 3.87 </line>
<line>HIS CA 9.62 8.72 8.17 5.96 5.57 3.80 </line>
<line>ASP CA 11.25 9.06 8.74 6.02 3.78 </line>
<line>THR CA 11.55 9.05 7.31 3.77 </line>
<line>SER CA 8.50 6.38 3.74 </line>
<line>GLY CA 5.66 3.76 </line>
<line>HIS CA 3.82 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>CYS CA 489</line>
<line>ALA CA 467</line>
<line>ARG CA 436</line>
<line>PRO CA 329</line>
<line>PRO CA 260</line>
<line>HIS CA 237</line>
<line>ASP CA 242</line>
<line>THR CA 174</line>
<line>SER CA 163</line>
<line>GLY CA 180</line>
<line>HIS CA 268</line>
<line>TYR CA 256</line>
</n14>
</entryChain>
<parallel>
<x>66.19000244140625</x>
<y>9.64900016784668</y>
<z>-23.14699935913086</z>
</parallel>
<rotation>
<x>-0.45899999141693115</x>
<y>-0.44200000166893005</y>
<z>0.7710000276565552</z>
<x>0.875</x>
<y>-0.37599998712539673</y>
<z>0.3050000071525574</z>
<x>0.1550000011920929</x>
<y>0.8140000104904175</y>
<z>0.5590000152587891</z>
</rotation>
<rmsd>2.025928020477295</rmsd>
<dmax>3.591442108154297</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1QLRB</entryIDChain>
<sequence>INHSG-STNYN</sequence>
<secondary-structure>EE -EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 2040 CA ILE B 51 8.767 11.094 40.484 1.00 27.77 C </line>
<line>ATOM 2048 CA ASN B 52 7.521 7.758 39.065 1.00 28.83 C </line>
<line>ATOM 2056 CA HIS B 53 6.386 4.529 40.673 1.00 32.15 C </line>
<line>ATOM 2066 CA SER B 54 9.872 3.065 40.756 1.00 37.97 C </line>
<line>ATOM 2072 CA GLY B 55 11.556 5.908 42.625 1.00 36.03 C </line>
<line>ATOM 2076 CA SER B 56 13.555 7.822 40.005 1.00 35.67 C </line>
<line>ATOM 2082 CA THR B 57 13.128 11.570 40.523 1.00 34.27 C </line>
<line>ATOM 2089 CA ASN B 58 14.131 14.870 38.788 1.00 35.44 C </line>
<line>ATOM 2097 CA TYR B 59 14.391 18.156 40.758 1.00 32.03 C </line>
<line>ATOM 2109 CA ASN B 60 14.498 21.841 39.897 1.00 30.82 C </line>
</atom-coordinate>
<distance-map>
<line> ASN TYR ASN THR SER GLY SER HIS ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.19 9.03 6.78 4.39 5.82 6.27 8.11 6.99 3.83 </line>
<line>ASN CA 15.74 12.58 9.71 6.94 6.11 5.69 5.51 3.78 </line>
<line>HIS CA 19.13 15.80 13.06 9.75 7.92 5.70 3.78 </line>
<line>SER CA 19.36 15.75 12.70 9.11 6.06 3.80 </line>
<line>GLY CA 16.43 12.71 10.08 6.24 3.81 </line>
<line>SER CA 14.05 10.40 7.18 3.81 </line>
<line>THR CA 10.38 6.71 3.86 </line>
<line>ASN CA 7.07 3.84 </line>
<line>TYR CA 3.79 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>ILE CA 385</line>
<line>ASN CA 351</line>
<line>HIS CA 287</line>
<line>SER CA 215</line>
<line>GLY CA 227</line>
<line>SER CA 220</line>
<line>THR CA 288</line>
<line>ASN CA 278</line>
<line>TYR CA 288</line>
<line>ASN CA 252</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BFV</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1BFVH</entryIDChain>
<sequence>INSDGEPIYYP</sequence>
<secondary-structure>E </secondary-structure>
<atom-coordinate>
<line>ATOM 1247 CA ILE H 51 63.011 32.595 13.839 1.00 15.18 C </line>
<line>ATOM 1255 CA ASN H 52 60.663 31.537 11.051 1.00 15.91 C </line>
<line>ATOM 1263 CA SER H 53 61.172 32.809 7.465 1.00 19.00 C </line>
<line>ATOM 1269 CA ASP H 54 58.278 35.246 8.203 1.00 20.96 C </line>
<line>ATOM 1277 CA GLY H 55 60.382 37.088 10.837 1.00 18.97 C </line>
<line>ATOM 1281 CA GLU H 56 58.484 35.683 13.854 1.00 20.19 C </line>
<line>ATOM 1290 CA PRO H 57 60.607 34.375 16.781 1.00 24.05 C </line>
<line>ATOM 1297 CA ILE H 58 59.737 30.715 17.358 1.00 24.19 C </line>
<line>ATOM 1305 CA TYR H 59 62.051 30.069 20.350 1.00 20.01 C </line>
<line>ATOM 1317 CA TYR H 60 63.828 31.837 23.254 1.00 18.10 C </line>
<line>ATOM 1329 CA PRO H 61 65.231 30.149 26.380 1.00 21.63 C </line>
</atom-coordinate>
<distance-map>
<line> PRO TYR TYR ILE PRO GLU GLY ASP SER ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.97 9.48 7.05 5.16 4.20 5.48 6.01 7.82 6.64 3.80 </line>
<line>ASN CA 16.06 12.61 9.52 6.43 6.39 5.46 5.56 5.25 3.84 </line>
<line>SER CA 19.53 16.04 13.20 10.21 9.46 7.50 5.50 3.85 </line>
<line>ASP CA 20.12 16.40 13.73 10.32 8.93 5.67 3.84 </line>
<line>GLY CA 17.70 13.92 11.94 9.14 6.54 3.83 </line>
<line>GLU CA 15.27 11.48 9.30 6.21 3.85 </line>
<line>PRO CA 11.46 7.66 5.78 3.81 </line>
<line>ILE CA 10.58 7.26 3.84 </line>
<line>TYR CA 6.82 3.84 </line>
<line>TYR CA 3.82 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>ILE CA 382</line>
<line>ASN CA 320</line>
<line>SER CA 302</line>
<line>ASP CA 216</line>
<line>GLY CA 276</line>
<line>GLU CA 234</line>
<line>PRO CA 285</line>
<line>ILE CA 264</line>
<line>TYR CA 287</line>
<line>TYR CA 277</line>
<line>PRO CA 239</line>
</n14>
</entryChain>
<parallel>
<x>-50.12300109863281</x>
<y>-24.726999282836914</y>
<z>27.128999710083008</z>
</parallel>
<rotation>
<x>-0.5059999823570251</x>
<y>0.5640000104904175</y>
<z>0.6520000100135803</z>
<x>0.4390000104904175</x>
<y>-0.4819999933242798</y>
<z>0.7580000162124634</z>
<x>0.7419999837875366</x>
<y>0.6700000166893005</y>
<z>-0.004000000189989805</z>
</rotation>
<rmsd>1.6134719848632812</rmsd>
<dmax>2.600296974182129</dmax>
</indel>