NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BHNF-2B8PA
confEVID 1BHNF-2B8PA
pdbIDA 1BHN
pdbIDB 2B8P
pdbChainA F
pdbChainB A
identity 0.38060000538826
indelSize 2
alignment <alignment>
<seq1>ANSERTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRAS-EDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIALWFHPEELVNYKSCAQNWIYE</seq1>
<seq2>-GLQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKE-----YFNDNCDFMVSGPIISIVYEGTDAISKIRRLQG--NILT--PGTIRGDLANDIRENLIHASDSEDSAVDEISIWFP-----------------</seq2>
<ss_1> EEEEEEEEHHHH HHHHHHHHH EEEEEEEEEEE-HHHHHHHGGG HHHHHH EEEEEEEEEE HHHHHHHHH HHHHH EEE HHHHHHHHHHH GGHHHH </ss_1>
<ss_2>- EEEEEEEE HHHHHHHHHH EEEEE HHHHHH ----- HHHHHHHHH EEEEEEEE HHHHHHHHH -- -- HHHHH EEE HHHHHHHHHHH -----------------</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BHN</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1BHNF</entryIDChain>
<sequence>FMRAS-EDLLK</sequence>
<secondary-structure>EEEEE-HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 6340 CA PHE F 40 46.419 15.637 72.809 1.00 13.15 C </line>
<line>ATOM 6351 CA MET F 41 46.948 17.426 76.188 1.00 25.83 C </line>
<line>ATOM 6359 CA ARG F 42 45.670 17.074 79.863 1.00 27.78 C </line>
<line>ATOM 6370 CA ALA F 43 44.404 20.525 80.594 1.00 9.63 C </line>
<line>ATOM 6375 CA SER F 44 45.526 22.717 83.468 1.00 43.77 C </line>
<line>ATOM 6381 CA GLU F 45 43.254 23.692 86.234 1.00 26.16 C </line>
<line>ATOM 6390 CA ASP F 46 43.982 27.211 85.584 1.00 45.00 C </line>
<line>ATOM 6398 CA LEU F 47 43.334 26.856 81.968 1.00 36.80 C </line>
<line>ATOM 6406 CA LEU F 48 40.396 24.842 82.647 1.00 39.31 C </line>
<line>ATOM 6414 CA LYS F 49 39.520 27.755 84.999 1.00 51.49 C </line>
</atom-coordinate>
<distance-map>
<line> LYS LEU LEU ASP GLU SER ALA ARG MET PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 18.52 14.76 14.81 17.41 15.97 12.83 9.41 7.24 3.86 </line>
<line>MET CA 15.48 11.82 11.64 13.89 12.40 9.11 5.96 3.91 </line>
<line>ARG CA 13.35 9.79 10.27 11.76 9.50 6.70 3.75 </line>
<line>ALA CA 9.77 6.24 6.57 8.35 6.57 3.78 </line>
<line>SER CA 7.99 5.61 4.92 5.20 3.71 </line>
<line>GLU CA 5.65 4.73 5.31 3.65 </line>
<line>ASP CA 4.53 5.21 3.69 </line>
<line>LEU CA 4.95 3.63 </line>
<line>LEU CA 3.85 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>PHE CA 293</line>
<line>MET CA 291</line>
<line>ARG CA 294</line>
<line>ALA CA 354</line>
<line>SER CA 281</line>
<line>GLU CA 244</line>
<line>ASP CA 232</line>
<line>LEU CA 314</line>
<line>LEU CA 361</line>
<line>LYS CA 283</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2B8P</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2B8PA</entryIDChain>
<sequence>FWSKAPRNLIE</sequence>
<secondary-structure>EE HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 334 CA PHE A 37 50.761 26.561 66.160 1.00 38.91 C </line>
<line>ATOM 345 CA TRP A 38 52.498 29.905 66.528 1.00 42.74 C </line>
<line>ATOM 359 CA SER A 39 54.054 31.024 69.815 1.00 50.90 C </line>
<line>ATOM 365 CA LYS A 40 53.441 34.428 68.243 1.00 59.10 C </line>
<line>ATOM 374 CA ALA A 41 52.174 34.528 64.662 1.00 62.92 C </line>
<line>ATOM 379 CA PRO A 42 54.217 36.814 62.383 1.00 68.50 C </line>
<line>ATOM 386 CA ARG A 43 53.256 40.506 62.343 1.00 72.15 C </line>
<line>ATOM 397 CA ASN A 44 53.251 40.025 58.581 1.00 73.49 C </line>
<line>ATOM 405 CA LEU A 45 50.442 37.451 58.359 1.00 69.85 C </line>
<line>ATOM 413 CA ILE A 46 48.228 39.311 60.857 1.00 69.69 C </line>
<line>ATOM 421 CA GLU A 47 48.423 42.324 58.563 1.00 72.01 C </line>
</atom-coordinate>
<distance-map>
<line> GLU ILE LEU ASN ARG PRO ALA LYS SER TRP PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 17.65 14.04 13.40 15.65 14.67 11.46 8.23 8.57 6.64 3.79 </line>
<line>TRP CA 15.31 11.78 11.31 12.89 11.42 8.24 5.00 4.93 3.80 </line>
<line>SER CA 16.91 13.52 13.62 14.42 12.10 9.42 6.51 3.80 </line>
<line>LYS CA 13.46 10.27 10.76 11.17 8.47 6.37 3.80 </line>
<line>ALA CA 10.59 7.28 7.16 8.27 6.50 3.82 </line>
<line>PRO CA 8.86 6.67 5.55 5.07 3.82 </line>
<line>ARG CA 6.40 5.38 5.76 3.79 </line>
<line>ASN CA 5.35 5.56 3.82 </line>
<line>LEU CA 5.28 3.82 </line>
<line>ILE CA 3.79 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>PHE CA 278</line>
<line>TRP CA 279</line>
<line>SER CA 224</line>
<line>LYS CA 268</line>
<line>ALA CA 329</line>
<line>PRO CA 279</line>
<line>ARG CA 256</line>
<line>ASN CA 242</line>
<line>LEU CA 338</line>
<line>ILE CA 375</line>
<line>GLU CA 274</line>
</n14>
</entryChain>
<parallel>
<x>-7.543000221252441</x>
<y>-12.91100025177002</y>
<z>16.50200080871582</z>
</parallel>
<rotation>
<x>0.8579999804496765</x>
<y>-0.15800000727176666</y>
<z>0.48899999260902405</z>
<x>-0.4490000009536743</x>
<y>0.23600000143051147</y>
<z>0.8619999885559082</z>
<x>-0.25099998712539673</x>
<y>-0.9589999914169312</y>
<z>0.13099999725818634</z>
</rotation>
<rmsd>2.1810359954833984</rmsd>
<dmax>3.2990050315856934</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2B8P</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2B8PA</entryIDChain>
<sequence>QHYKE-----YFNDN</sequence>
<secondary-structure>HH ----- HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 430 CA GLN A 48 47.570 40.429 55.358 1.00 68.28 C </line>
<line>ATOM 439 CA HIS A 49 44.707 38.604 57.067 1.00 65.89 C </line>
<line>ATOM 449 CA TYR A 50 42.949 41.740 58.322 1.00 68.10 C </line>
<line>ATOM 461 CA LYS A 51 44.364 43.820 55.452 1.00 74.86 C </line>
<line>ATOM 470 CA GLU A 52 41.412 46.206 55.220 1.00 78.98 C </line>
<line>ATOM 479 CA TYR A 58 42.511 50.982 65.024 1.00 75.97 C </line>
<line>ATOM 491 CA PHE A 59 43.781 48.384 62.592 1.00 75.57 C </line>
<line>ATOM 502 CA ASN A 60 47.133 48.496 64.381 1.00 77.92 C </line>
<line>ATOM 510 CA ASP A 61 45.476 48.123 67.790 1.00 77.38 C </line>
<line>ATOM 518 CA ASN A 62 43.851 44.777 66.940 1.00 73.83 C </line>
</atom-coordinate>
<distance-map>
<line> ASN ASP ASN PHE TYR GLU LYS TYR HIS GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 12.92 14.77 12.11 11.40 15.18 8.44 4.67 5.64 3.80 </line>
<line>HIS CA 11.68 14.36 12.54 11.27 14.88 8.49 5.47 3.81 </line>
<line>TYR CA 9.18 11.69 9.99 7.94 11.42 5.65 3.82 </line>
<line>LYS CA 11.54 13.11 10.45 8.49 12.10 3.80 </line>
<line>GLU CA 12.06 13.35 11.04 8.04 10.96 </line>
<line>TYR CA 6.63 4.96 5.29 3.78 </line>
<line>PHE CA 5.65 5.47 3.80 </line>
<line>ASN CA 5.58 3.81 </line>
<line>ASP CA 3.82 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>GLN CA 267</line>
<line>HIS CA 386</line>
<line>TYR CA 341</line>
<line>LYS CA 228</line>
<line>GLU CA 171</line>
<line>TYR CA 152</line>
<line>PHE CA 195</line>
<line>ASN CA 192</line>
<line>ASP CA 197</line>
<line>ASN CA 292</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BHN</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1BHNF</entryIDChain>
<sequence>EHYIDLKDRPFFAGL</sequence>
<secondary-structure>HHGGG HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 6423 CA GLU F 50 40.467 30.691 82.813 1.00 37.48 C </line>
<line>ATOM 6432 CA HIS F 51 38.380 28.926 80.175 1.00 35.10 C </line>
<line>ATOM 6442 CA TYR F 52 35.161 27.901 81.929 1.00 43.85 C </line>
<line>ATOM 6454 CA ILE F 53 35.690 31.346 83.559 1.00 69.31 C </line>
<line>ATOM 6462 CA ASP F 54 32.277 32.562 82.213 1.00 65.69 C </line>
<line>ATOM 6470 CA LEU F 55 30.560 29.823 84.346 1.00 49.54 C </line>
<line>ATOM 6478 CA LYS F 56 32.775 30.680 87.279 1.00 70.30 C </line>
<line>ATOM 6487 CA ASP F 57 30.191 30.109 89.952 1.00 57.04 C </line>
<line>ATOM 6495 CA ARG F 58 27.549 27.765 88.698 1.00 43.17 C </line>
<line>ATOM 6506 CA PRO F 59 26.546 24.490 90.212 1.00 46.88 C </line>
<line>ATOM 6513 CA PHE F 60 28.820 22.347 88.285 1.00 60.52 C </line>
<line>ATOM 6524 CA PHE F 61 31.905 24.525 87.731 1.00 45.02 C </line>
<line>ATOM 6535 CA ALA F 62 34.508 23.223 89.805 1.00 47.24 C </line>
<line>ATOM 6540 CA GLY F 63 32.765 19.809 89.079 1.00 49.65 C </line>
<line>ATOM 6544 CA LEU F 64 33.523 20.544 85.481 1.00 35.83 C </line>
</atom-coordinate>
<distance-map>
<line> LEU GLY ALA PHE PHE PRO ARG ASP LYS LEU ASP ILE TYR HIS GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 12.58 14.73 11.84 11.64 15.34 16.94 14.49 12.53 8.89 10.06 8.42 4.88 6.06 3.80 </line>
<line>HIS CA 11.05 13.93 11.84 10.88 14.16 16.14 13.83 12.81 9.22 8.91 7.39 4.95 3.81 </line>
<line>TYR CA 8.33 11.06 9.18 7.46 10.56 12.43 10.19 9.69 6.48 5.54 5.49 3.85 </line>
<line>ILE CA 11.18 13.12 10.31 8.85 12.27 13.22 10.27 8.52 4.77 5.41 3.87 </line>
<line>ASP CA 12.52 14.49 12.24 9.76 12.38 12.73 9.35 8.38 5.43 3.87 </line>
<line>LEU CA 9.81 11.29 9.43 6.43 8.63 8.89 5.68 5.63 3.77 </line>
<line>LYS CA 10.32 11.02 8.06 6.23 9.28 9.26 6.15 3.76 </line>
<line>ASP CA 11.07 10.65 8.13 6.25 8.06 6.70 3.75 </line>
<line>ARG CA 9.91 9.52 8.38 5.51 5.58 3.74 </line>
<line>PRO CA 9.31 7.87 8.07 5.91 3.67 </line>
<line>PHE CA 5.76 4.76 5.95 3.82 </line>
<line>PHE CA 4.85 4.98 3.57 </line>
<line>ALA CA 5.18 3.90 </line>
<line>GLY CA 3.75 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>GLU CA 258</line>
<line>HIS CA 370</line>
<line>TYR CA 353</line>
<line>ILE CA 259</line>
<line>ASP CA 240</line>
<line>LEU CA 208</line>
<line>LYS CA 186</line>
<line>ASP CA 145</line>
<line>ARG CA 141</line>
<line>PRO CA 136</line>
<line>PHE CA 211</line>
<line>PHE CA 246</line>
<line>ALA CA 239</line>
<line>GLY CA 245</line>
<line>LEU CA 340</line>
</n14>
</entryChain>
<parallel>
<x>9.652000427246094</x>
<y>17.14299964904785</y>
<z>-25.386999130249023</z>
</parallel>
<rotation>
<x>0.765999972820282</x>
<y>-0.6389999985694885</y>
<z>-0.07599999755620956</z>
<x>0.01899999938905239</x>
<y>0.14100000262260437</y>
<z>-0.9900000095367432</z>
<x>0.6430000066757202</x>
<y>0.7559999823570251</y>
<z>0.11999999731779099</z>
</rotation>
<rmsd>0.733585000038147</rmsd>
<dmax>1.3974820375442505</dmax>
</indel>