NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BIJA-2ZLWD
confEVID 1BIJA-2ZLWD
pdbIDA 1BIJ
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.401399999856949
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFD--LSHG----SAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG -- ---- HHHHHHHHHHHHHHGGG IIIII HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BIJ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BIJA</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 93 CA TRP A 14 -47.693 -34.932 81.115 1.00 23.85 C </line>
<line>ATOM 107 CA GLY A 15 -49.230 -37.292 78.562 1.00 23.82 C </line>
<line>ATOM 111 CA LYS A 16 -52.274 -35.026 78.592 1.00 23.46 C </line>
<line>ATOM 120 CA VAL A 17 -49.900 -32.110 77.968 1.00 20.56 C </line>
<line>ATOM 127 CA GLY A 18 -48.934 -33.998 74.819 1.00 18.74 C </line>
<line>ATOM 131 CA ALA A 19 -47.462 -31.859 72.041 1.00 18.63 C </line>
<line>ATOM 136 CA HIS A 20 -48.144 -28.764 74.173 1.00 19.90 C </line>
<line>ATOM 146 CA ALA A 21 -44.981 -29.465 76.205 1.00 18.08 C </line>
<line>ATOM 151 CA GLY A 22 -42.736 -26.847 74.503 1.00 15.19 C </line>
<line>ATOM 155 CA GLU A 23 -45.608 -24.383 74.477 1.00 18.07 C </line>
<line>ATOM 164 CA TYR A 24 -45.772 -24.791 78.258 1.00 18.29 C </line>
<line>ATOM 176 CA GLY A 25 -42.039 -24.725 78.977 1.00 18.69 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 11.86 10.71 12.64 11.56 7.83 9.30 9.58 6.48 4.77 5.23 3.80 </line>
<line>GLY CA 14.48 12.97 14.02 12.95 9.21 9.65 8.67 4.99 5.26 3.79 </line>
<line>LYS CA 14.53 12.13 13.22 13.21 9.48 8.71 8.72 5.14 3.81 </line>
<line>VAL CA 10.83 8.41 9.50 9.54 5.86 5.36 6.41 3.80 </line>
<line>GLY CA 12.28 10.32 10.18 9.47 6.17 5.33 3.80 </line>
<line>ALA CA 11.33 9.56 8.08 7.32 5.41 3.82 </line>
<line>HIS CA 8.76 6.17 5.07 5.75 3.82 </line>
<line>ALA CA 6.23 5.17 5.40 3.85 </line>
<line>GLY CA 5.00 5.25 3.78 </line>
<line>GLU CA 5.75 3.81 </line>
<line>TYR CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 381</line>
<line>GLY CA 252</line>
<line>LYS CA 245</line>
<line>VAL CA 306</line>
<line>GLY CA 220</line>
<line>ALA CA 190</line>
<line>HIS CA 254</line>
<line>ALA CA 317</line>
<line>GLY CA 287</line>
<line>GLU CA 304</line>
<line>TYR CA 359</line>
<line>GLY CA 404</line>
</n14>
</entryChain>
<parallel>
<x>10.5649995803833</x>
<y>42.790000915527344</y>
<z>-49.3489990234375</z>
</parallel>
<rotation>
<x>0.503000020980835</x>
<y>0.39500001072883606</y>
<z>0.7689999938011169</z>
<x>0.24199999868869781</x>
<y>-0.9179999828338623</y>
<z>0.31299999356269836</z>
<x>0.8299999833106995</x>
<y>0.028999999165534973</y>
<z>-0.5569999814033508</z>
</rotation>
<rmsd>1.6617799997329712</rmsd>
<dmax>3.4934449195861816</dmax>
</indel>