NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BIJC-2ZLWD
confEVID 1BIJC-2ZLWD
pdbIDA 1BIJ
pdbIDB 2ZLW
pdbChainA C
pdbChainB D
identity 0.42179998755455
indelSize 1
alignment <alignment>
<seq1>-VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - ----- HHHHHHHHHHHHHHHHHH HHHH HHHHHIIIII HHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHGGG </ss_1>
<ss_2> HHHHHHHHHH --HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>WDKVN--EEEVG</sequence>
<secondary-structure> --HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
<line>ATOM 3444 CA GLY D 24 -32.072 6.515 32.744 1.00 15.19 C </line>
</atom-coordinate>
<distance-map>
<line> GLY VAL GLU GLU GLU ASN VAL LYS ASP TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.84 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 14.65 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 13.34 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 9.66 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 8.13 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.62 5.30 5.54 3.81 </line>
<line>GLU CA 5.13 5.65 3.79 </line>
<line>GLU CA 5.54 3.81 </line>
<line>VAL CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
<line>GLY CA 398</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BIJ</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1BIJC</entryIDChain>
<sequence>WGKVGAHAGEYG</sequence>
<secondary-structure>HHHHGGGHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2287 CA TRP C 14 -15.234 -33.830 115.089 1.00 16.18 C </line>
<line>ATOM 2301 CA GLY C 15 -12.471 -35.821 116.760 1.00 17.36 C </line>
<line>ATOM 2305 CA LYS C 16 -11.122 -32.516 118.011 1.00 21.01 C </line>
<line>ATOM 2314 CA VAL C 17 -14.460 -31.315 119.421 1.00 21.52 C </line>
<line>ATOM 2321 CA GLY C 18 -14.496 -34.284 121.785 1.00 20.60 C </line>
<line>ATOM 2325 CA ALA C 19 -16.096 -34.194 125.228 1.00 21.51 C </line>
<line>ATOM 2330 CA HIS C 20 -17.177 -30.676 124.329 1.00 19.47 C </line>
<line>ATOM 2340 CA ALA C 21 -19.569 -31.939 121.637 1.00 15.32 C </line>
<line>ATOM 2345 CA GLY C 22 -22.730 -31.712 123.757 1.00 15.47 C </line>
<line>ATOM 2349 CA GLU C 23 -21.365 -28.385 125.051 1.00 19.62 C </line>
<line>ATOM 2358 CA TYR C 24 -21.175 -26.997 121.546 1.00 20.34 C </line>
<line>ATOM 2370 CA GLY C 25 -24.653 -28.467 121.130 1.00 22.17 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR GLU GLY ALA HIS ALA GLY VAL LYS GLY TRP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TRP CA 12.41 11.12 12.90 11.65 8.08 9.95 10.18 6.75 5.07 5.21 3.79 </line>
<line>GLY CA 14.89 13.29 14.25 13.08 9.45 10.29 9.35 5.63 5.60 3.78 </line>
<line>LYS CA 14.46 12.00 13.10 12.98 9.21 8.94 8.92 5.36 3.82 </line>
<line>VAL CA 10.72 8.26 9.38 9.35 5.60 5.65 6.68 3.80 </line>
<line>GLY CA 11.72 9.89 9.63 8.85 5.59 5.17 3.80 </line>
<line>ALA CA 11.08 9.55 7.84 7.23 5.48 3.79 </line>
<line>HIS CA 8.43 6.10 4.83 5.68 3.82 </line>
<line>ALA CA 6.18 5.20 5.25 3.81 </line>
<line>GLY CA 4.60 5.43 3.82 </line>
<line>GLU CA 5.12 3.77 </line>
<line>TYR CA 3.80 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TRP CA 378</line>
<line>GLY CA 247</line>
<line>LYS CA 247</line>
<line>VAL CA 302</line>
<line>GLY CA 227</line>
<line>ALA CA 190</line>
<line>HIS CA 249</line>
<line>ALA CA 321</line>
<line>GLY CA 295</line>
<line>GLU CA 311</line>
<line>TYR CA 367</line>
<line>GLY CA 399</line>
</n14>
</entryChain>
<parallel>
<x>-20.673999786376953</x>
<y>43.50899887084961</y>
<z>-92.50800323486328</z>
</parallel>
<rotation>
<x>-0.6330000162124634</x>
<y>0.0689999982714653</y>
<z>-0.7710000276565552</z>
<x>0.2549999952316284</x>
<y>-0.921999990940094</y>
<z>-0.2919999957084656</z>
<x>-0.7310000061988831</x>
<y>-0.38199999928474426</y>
<z>0.5659999847412109</z>
</rotation>
<rmsd>1.5259209871292114</rmsd>
<dmax>3.021617889404297</dmax>
</indel>