1BJJB-2NOTA | |
confEVID | 1BJJB-2NOTA |
pdbIDA | 1BJJ |
pdbIDB | 2NOT |
pdbChainA | B |
pdbChainB | A |
identity | 0.35249999165535 |
indelSize | 3 |
alignment | <alignment> <seq1>NLLQFNKMIKEETG--KNAIPFYAFYGCYCGWGGQGKPKDGTDRCCFVHDCCYGRLVNCNTK--SDIYSYSLKEGYITCG-KGTNCEEQICECDRVAAECFRRNLDTYNNGYMFYRDSK-CTETSEEC</seq1> <seq2>NLVQFSYLIQCANHGRRPT-RHYMDYGCYCGWGGSGTPVDELDRCCKIHDDCYSDAEKKGCSPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAKA--PYNNANWNIDTKKRCQ------</seq2> <ss_1> HHHHHHHHHHH -- HHHHHHHHHHHHHH EEE-- EEEE EEE - HHHHHHHHHHHHHHHHHHH GGG GGG - </ss_1> <ss_2> HHHHHHHHHH -HHHH HHHHHHHHHHHHHHHHH HHHH EEE EEE HHHHHHHHHHHHHHHHHHH -- GGG HHHH ------</ss_2> </alignment> |
indel | <indel> <confEVID></confEVID> <index>0</index> <entryChain> <pdbID>1BJJ</pdbID> <pdbChain>B</pdbChain> <entryIDChain>1BJJB</entryIDChain> <sequence>NCNTK--SDIYS</sequence> <secondary-structure> EEE-- E</secondary-structure> <atom-coordinate> <line>ATOM 1410 CA ASN B 59 6.140 89.384 30.780 1.00 37.85 C </line> <line>ATOM 1418 CA CYS B 61 7.663 92.465 29.186 1.00 28.57 C </line> <line>ATOM 1424 CA ASN B 67 11.331 93.510 29.082 1.00 29.76 C </line> <line>ATOM 1432 CA THR B 68 10.371 96.790 30.662 1.00 20.50 C </line> <line>ATOM 1439 CA LYS B 69 13.910 98.100 30.937 1.00 17.62 C </line> <line>ATOM 1448 CA SER B 70 15.730 96.886 27.802 1.00 21.40 C </line> <line>ATOM 1454 CA ASP B 71 12.933 96.665 25.234 1.00 12.53 C </line> <line>ATOM 1462 CA ILE B 72 13.309 99.448 22.690 1.00 13.14 C </line> <line>ATOM 1470 CA TYR B 73 10.034 101.015 21.655 1.00 10.45 C </line> <line>ATOM 1482 CA SER B 74 8.847 103.507 19.090 1.00 13.78 C </line> </atom-coordinate> <distance-map> <line> SER TYR ILE ASP SER LYS THR ASN CYS ASN </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>ASN CA 18.53 15.29 14.77 11.40 12.53 11.68 8.53 6.84 3.79 </line> <line>CYS CA 15.01 11.64 11.08 7.81 9.30 8.59 5.31 3.82 </line> <line>ASN CA 14.35 10.64 8.95 5.23 5.69 5.58 3.77 </line> <line>THR CA 13.47 9.95 8.90 6.00 6.08 3.78 </line> <line>LYS CA 13.97 10.47 8.38 5.96 3.82 </line> <line>SER CA 12.93 9.34 6.21 3.80 </line> <line>ASP CA 10.06 6.34 3.79 </line> <line>ILE CA 7.02 3.78 </line> <line>TYR CA 3.77 </line> <line>SER CA </line> </distance-map> <n14> <line>ASN CA 159</line> <line>CYS CA 234</line> <line>ASN CA 242</line> <line>THR CA 314</line> <line>LYS CA 295</line> <line>SER CA 232</line> <line>ASP CA 270</line> <line>ILE CA 265</line> <line>TYR CA 300</line> <line>SER CA 268</line> </n14> </entryChain> <entryChain> <pdbID>2NOT</pdbID> <pdbChain>A</pdbChain> <entryIDChain>2NOTA</entryIDChain> <sequence>KKGCSPKMSAYD</sequence> <secondary-structure> HHHH </secondary-structure> <atom-coordinate> <line>ATOM 448 CA LYS A 57 -2.556 19.164 43.522 1.00 2.33 C </line> <line>ATOM 457 CA LYS A 59 -2.467 21.275 40.298 1.00 2.00 C </line> <line>ATOM 466 CA GLY A 60 -5.399 19.295 38.860 1.00 2.00 C </line> <line>ATOM 470 CA CYS A 61 -3.214 17.052 36.722 1.00 2.00 C </line> <line>ATOM 476 CA SER A 67 -4.165 13.354 36.918 1.00 5.61 C </line> <line>ATOM 482 CA PRO A 68 -0.869 11.496 36.172 1.00 4.23 C </line> <line>ATOM 489 CA LYS A 69 -2.915 8.416 35.297 1.00 11.82 C </line> <line>ATOM 498 CA MET A 70 -5.278 10.186 32.885 1.00 20.43 C </line> <line>ATOM 506 CA SER A 71 -2.610 12.470 31.288 1.00 7.12 C </line> <line>ATOM 512 CA ALA A 72 -1.671 11.215 27.801 1.00 3.72 C </line> <line>ATOM 517 CA TYR A 73 1.079 13.607 26.784 1.00 2.00 C </line> <line>ATOM 529 CA ASP A 74 3.395 14.130 23.825 1.00 2.00 C </line> </atom-coordinate> <distance-map> <line> ASP TYR ALA SER MET LYS PRO SER CYS GLY LYS LYS </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>LYS CA 21.18 18.01 17.64 13.95 14.18 13.54 10.75 8.94 7.15 5.46 3.85 </line> <line>LYS CA 18.89 15.94 16.06 12.60 13.63 13.80 10.73 8.78 5.58 3.82 </line> <line>GLY CA 18.17 14.84 14.19 10.57 10.89 11.71 9.41 6.37 3.79 </line> <line>CYS CA 14.78 11.36 10.77 7.13 8.13 8.76 6.06 3.82 </line> <line>SER CA 15.14 11.41 9.69 5.91 5.25 5.35 3.86 </line> <line>PRO CA 13.33 9.82 8.41 5.28 5.65 3.80 </line> <line>LYS CA 14.29 10.74 8.10 5.71 3.81 </line> <line>MET CA 13.15 9.45 6.32 3.86 </line> <line>SER CA 9.72 5.93 3.82 </line> <line>ALA CA 7.07 3.78 </line> <line>TYR CA 3.79 </line> <line>ASP CA </line> </distance-map> <n14> <line>LYS CA 147</line> <line>LYS CA 167</line> <line>GLY CA 168</line> <line>CYS CA 246</line> <line>SER CA 258</line> <line>PRO CA 321</line> <line>LYS CA 267</line> <line>MET CA 220</line> <line>SER CA 300</line> <line>ALA CA 276</line> <line>TYR CA 321</line> <line>ASP CA 287</line> </n14> </entryChain> <parallel> <x>14.843000411987305</x> <y>79.90499877929688</y> <z>-7.739999771118164</z> </parallel> <rotation> <x>-0.7940000295639038</x> <y>0.5770000219345093</y> <z>-0.19300000369548798</z> <x>-0.4860000014305115</x> <y>-0.7929999828338623</y> <z>-0.36800000071525574</z> <x>-0.36500000953674316</x> <y>-0.1979999989271164</y> <z>0.9100000262260437</z> </rotation> <rmsd>2.8968470096588135</rmsd> <dmax>3.532322883605957</dmax> </indel> <indel> <confEVID></confEVID> <index>1</index> <entryChain> <pdbID>1BJJ</pdbID> <pdbChain>B</pdbChain> <entryIDChain>1BJJB</entryIDChain> <sequence>YITCG-KGTNC</sequence> <secondary-structure>EEE - HH</secondary-structure> <atom-coordinate> <line>ATOM 1536 CA TYR B 81 4.318 116.263 22.796 1.00 27.37 C </line> <line>ATOM 1548 CA ILE B 82 5.791 112.873 23.627 1.00 19.62 C </line> <line>ATOM 1556 CA THR B 83 3.748 110.382 21.615 1.00 20.29 C </line> <line>ATOM 1563 CA CYS B 84 4.126 106.621 21.692 1.00 14.43 C </line> <line>ATOM 1569 CA GLY B 85 4.416 104.852 18.363 1.00 19.58 C </line> <line>ATOM 1573 CA LYS B 86 2.951 101.585 17.185 1.00 25.59 C </line> <line>ATOM 1582 CA GLY B 88 4.788 98.364 17.933 1.00 13.76 C </line> <line>ATOM 1586 CA THR B 89 4.097 95.454 20.278 1.00 16.50 C </line> <line>ATOM 1593 CA ASN B 90 1.697 95.413 23.288 1.00 18.57 C </line> <line>ATOM 1601 CA CYS B 91 4.750 95.499 25.542 1.00 18.51 C </line> </atom-coordinate> <distance-map> <line> CYS ASN THR GLY LYS GLY CYS THR ILE TYR </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>TYR CA 20.95 21.02 20.96 18.55 15.77 12.24 9.71 6.03 3.79 </line> <line>ILE CA 17.51 17.94 17.82 15.62 13.30 9.69 6.75 3.80 </line> <line>THR CA 15.42 15.20 14.99 12.61 9.88 6.45 3.78 </line> <line>CYS CA 11.79 11.58 11.26 9.10 6.86 3.78 </line> <line>GLY CA 11.80 10.99 9.60 6.51 3.77 </line> <line>LYS CA 10.49 8.77 6.96 3.78 </line> <line>GLY CA 8.13 6.85 3.80 </line> <line>THR CA 5.30 3.85 </line> <line>ASN CA 3.80 </line> <line>CYS CA </line> </distance-map> <n14> <line>TYR CA 215</line> <line>ILE CA 296</line> <line>THR CA 273</line> <line>CYS CA 305</line> <line>GLY CA 227</line> <line>LYS CA 181</line> <line>GLY CA 181</line> <line>THR CA 188</line> <line>ASN CA 209</line> <line>CYS CA 261</line> </n14> </entryChain> <entryChain> <pdbID>2NOT</pdbID> <pdbChain>A</pdbChain> <entryIDChain>2NOTA</entryIDChain> <sequence>GPYCRNIKKKC</sequence> <secondary-structure>EEE HH</secondary-structure> <atom-coordinate> <line>ATOM 588 CA GLY A 81 16.782 9.559 25.415 1.00 2.51 C </line> <line>ATOM 592 CA PRO A 82 13.263 11.086 25.774 1.00 2.00 C </line> <line>ATOM 599 CA TYR A 83 12.025 14.652 25.615 1.00 2.00 C </line> <line>ATOM 611 CA CYS A 84 8.703 16.412 26.107 1.00 2.00 C </line> <line>ATOM 617 CA ARG A 85 6.963 18.363 23.377 1.00 5.31 C </line> <line>ATOM 628 CA ASN A 86 4.109 20.093 25.261 1.00 3.46 C </line> <line>ATOM 636 CA ILE A 87 4.442 23.825 25.984 1.00 2.00 C </line> <line>ATOM 644 CA LYS A 88 0.857 25.103 26.105 1.00 10.64 C </line> <line>ATOM 653 CA LYS A 89 -1.077 22.111 27.532 1.00 3.56 C </line> <line>ATOM 662 CA LYS A 90 0.469 22.679 30.983 1.00 3.71 C </line> <line>ATOM 671 CA CYS A 91 -0.675 19.578 32.934 1.00 4.58 C </line> </atom-coordinate> <distance-map> <line> CYS LYS LYS LYS ILE ASN ARG CYS TYR PRO GLY </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>GLY CA 21.49 21.66 21.93 22.26 18.87 16.48 13.34 10.62 6.97 3.85 </line> <line>PRO CA 17.82 18.03 18.17 18.72 15.50 12.85 9.92 7.02 3.78 </line> <line>TYR CA 15.46 15.06 15.20 15.30 11.91 9.61 6.66 3.79 </line> <line>CYS CA 12.02 11.44 11.41 11.71 8.55 5.95 3.78 </line> <line>ARG CA 12.29 10.89 9.80 9.49 6.56 3.83 </line> <line>ASN CA 9.06 7.26 6.01 6.03 3.82 </line> <line>ILE CA 9.62 6.49 5.98 3.81 </line> <line>LYS CA 8.92 5.46 3.84 </line> <line>LYS CA 5.98 3.82 </line> <line>LYS CA 3.84 </line> <line>CYS CA </line> </distance-map> <n14> <line>GLY CA 280</line> <line>PRO CA 331</line> <line>TYR CA 305</line> <line>CYS CA 309</line> <line>ARG CA 237</line> <line>ASN CA 221</line> <line>ILE CA 168</line> <line>LYS CA 133</line> <line>LYS CA 189</line> <line>LYS CA 215</line> <line>CYS CA 276</line> </n14> </entryChain> <parallel> <x>-3.4649999141693115</x> <y>88.16000366210938</y> <z>-5.302000045776367</z> </parallel> <rotation> <x>-0.460999995470047</x> <y>0.8539999723434448</y> <z>-0.23999999463558197</z> <x>-0.5130000114440918</x> <y>-0.47699999809265137</y> <z>-0.7139999866485596</z> <x>-0.7239999771118164</x> <y>-0.20600000023841858</y> <z>0.6579999923706055</z> </rotation> <rmsd>1.4881789684295654</rmsd> <dmax>2.692142963409424</dmax> </indel> <indel> <confEVID></confEVID> <index>2</index> <entryChain> <pdbID>2NOT</pdbID> <pdbChain>A</pdbChain> <entryIDChain>2NOTA</entryIDChain> <sequence>CFAKA--PYNNA</sequence> <secondary-structure>HHHH -- GG</secondary-structure> <atom-coordinate> <line>ATOM 779 CA CYS A 105 17.365 8.881 36.705 1.00 2.00 C </line> <line>ATOM 785 CA PHE A 106 16.671 5.115 36.514 1.00 2.00 C </line> <line>ATOM 796 CA ALA A 107 19.189 4.693 33.684 1.00 5.40 C </line> <line>ATOM 801 CA LYS A 108 22.046 6.687 35.174 1.00 6.66 C </line> <line>ATOM 810 CA ALA A 109 21.458 5.127 38.617 1.00 2.00 C </line> <line>ATOM 815 CA PRO A 110 23.196 1.856 39.636 1.00 2.00 C </line> <line>ATOM 822 CA TYR A 111 21.020 -1.165 40.048 1.00 2.00 C </line> <line>ATOM 834 CA ASN A 112 21.683 -3.308 43.127 1.00 2.00 C </line> <line>ATOM 842 CA ASN A 113 20.080 -6.685 42.302 1.00 2.00 C </line> <line>ATOM 850 CA ALA A 114 20.191 -7.202 46.080 1.00 4.99 C </line> </atom-coordinate> <distance-map> <line> ALA ASN ASN TYR PRO ALA LYS ALA PHE CYS </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>CYS CA 18.83 16.76 14.44 11.20 9.59 5.87 5.39 5.48 3.83 </line> <line>PHE CA 15.99 13.58 11.82 8.42 7.93 5.23 5.76 3.81 </line> <line>ALA CA 17.21 14.30 12.63 8.84 7.72 5.45 3.79 </line> <line>LYS CA 17.76 15.28 12.78 9.30 6.68 3.83 </line> <line>ALA CA 14.47 12.45 9.57 6.47 3.84 </line> <line>PRO CA 11.52 9.47 6.41 3.75 </line> <line>TYR CA 8.57 6.04 3.81 </line> <line>ASN CA 5.11 3.83 </line> <line>ASN CA 3.81 </line> <line>ALA CA </line> </distance-map> <n14> <line>CYS CA 363</line> <line>PHE CA 434</line> <line>ALA CA 342</line> <line>LYS CA 272</line> <line>ALA CA 292</line> <line>PRO CA 255</line> <line>TYR CA 299</line> <line>ASN CA 255</line> <line>ASN CA 229</line> <line>ALA CA 202</line> </n14> </entryChain> <entryChain> <pdbID>1BJJ</pdbID> <pdbChain>B</pdbChain> <entryIDChain>1BJJB</entryIDChain> <sequence>CFRRNLDTYNNG</sequence> <secondary-structure>HHHH GGG GG</secondary-structure> <atom-coordinate> <line>ATOM 1708 CA CYS B 105 4.441 113.567 36.075 1.00 28.99 C </line> <line>ATOM 1714 CA PHE B 106 7.895 114.837 36.959 1.00 30.97 C </line> <line>ATOM 1725 CA ARG B 107 7.244 118.032 35.008 1.00 31.93 C </line> <line>ATOM 1736 CA ARG B 108 4.031 118.651 36.953 1.00 31.96 C </line> <line>ATOM 1747 CA ASN B 109 5.836 118.268 40.271 1.00 29.45 C </line> <line>ATOM 1755 CA LEU B 110 8.913 120.338 39.443 1.00 25.30 C </line> <line>ATOM 1763 CA ASP B 111 7.607 123.069 41.739 1.00 38.79 C </line> <line>ATOM 1771 CA THR B 112 7.791 120.842 44.824 1.00 31.38 C </line> <line>ATOM 1778 CA TYR B 113 11.065 119.178 43.816 1.00 37.45 C </line> <line>ATOM 1790 CA ASN B 114 13.276 119.087 46.911 1.00 33.90 C </line> <line>ATOM 1798 CA ASN B 115 17.056 118.847 46.689 1.00 38.75 C </line> <line>ATOM 1806 CA GLY B 116 16.983 117.496 50.210 1.00 34.51 C </line> </atom-coordinate> <distance-map> <line> GLY ASN ASN TYR THR ASP LEU ASN ARG ARG PHE CYS </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>CYS CA 19.30 17.31 15.03 11.63 11.86 11.51 8.79 6.45 5.18 5.38 3.78 </line> <line>PHE CA 16.29 13.95 12.09 8.71 9.90 9.52 6.12 5.19 5.43 3.80 </line> <line>ARG CA 18.06 15.28 13.39 9.67 10.22 8.41 5.27 5.45 3.81 </line> <line>ARG CA 18.57 16.26 13.59 9.84 8.99 7.43 5.73 3.80 </line> <line>ASN CA 14.95 12.94 10.01 6.38 5.58 5.32 3.80 </line> <line>LEU CA 13.75 11.00 8.74 5.01 5.52 3.80 </line> <line>ASP CA 13.81 11.47 8.65 5.60 3.81 </line> <line>THR CA 11.17 9.66 6.13 3.81 </line> <line>TYR CA 8.87 6.65 3.80 </line> <line>ASN CA 5.21 3.79 </line> <line>ASN CA 3.77 </line> <line>GLY CA </line> </distance-map> <n14> <line>CYS CA 367</line> <line>PHE CA 407</line> <line>ARG CA 320</line> <line>ARG CA 244</line> <line>ASN CA 285</line> <line>LEU CA 285</line> <line>ASP CA 195</line> <line>THR CA 222</line> <line>TYR CA 304</line> <line>ASN CA 263</line> <line>ASN CA 242</line> <line>GLY CA 221</line> </n14> </entryChain> <parallel> <x>12.630999565124512</x> <y>-114.3219985961914</y> <z>-2.1640000343322754</z> </parallel> <rotation> <x>-0.4690000116825104</x> <y>-0.8809999823570251</y> <z>-0.061000000685453415</z> <x>0.8019999861717224</x> <y>-0.39500001072883606</y> <z>-0.4480000138282776</z> <x>0.3709999918937683</x> <y>-0.2590000033378601</y> <z>0.8920000195503235</z> </rotation> <rmsd>0.8664820194244385</rmsd> <dmax>1.9242759943008423</dmax> </indel> |