NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BMFB-2HLDA
confEVID 1BMFB-2HLDA
pdbIDA 1BMF
pdbIDB 2HLD
pdbChainA B
pdbChainB A
identity 0.737600028514862
indelSize 1
alignment <alignment>
<seq1>DLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKARRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGFEA</seq1>
<seq2>NLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQSDL--DASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVAT---</seq2>
<ss_1> EEEEEEEEEEEEEEEEEE EEEEEE EEE EEE EEEEEE EEEE EEEEEEE GGG EEE EEE HHHHHH EEEEEE HHHHHHHHGGGHHHH GGG EEEEEEE HHHHHHHHHHHHH GGGEEEEEE HHHH HHHHHHHHHHHHHH EEEEEEE HHHHHHHHHHHHHH GGG HHHHHHHHGGG EE EEEEEE HHHHH HHHH EEE HHHHH EE HHHHH HHHHHHHHHHH HHHHHHHHHHHHHHHH HHHHHHHHHHHH HHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHHH </ss_1>
<ss_2> EEEEEEEEEEEEEEEEEE EEEEE EEEEEEE EEEEEEE GGG EEEE EEEEEEE EE EEEEE EEE HHHHHH EE EEEEEEE HHHHHHHHHGGGHHHH EEEEEEE HHHHHHHHHHHHH GGGEEEEEE HHHH HHHHHHHHHHHHH EEEEEEE HHHHHHHHHHHHHH GGG HHHHHHHHGGG EEEEE EEE HHHHH HHHHEEEEEE HHHHH EE GGGG HHHHHHHHHHHHHHHHHHH GGGG -- HHHHHHHHHHHHHHHH HHHHHHHHHHHH GGGHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHH ---</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2HLD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2HLDA</entryIDChain>
<sequence>AQSDL--DASTK</sequence>
<secondary-structure>G -- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2872 CA ALA A 406 -21.512 11.241 33.849 1.00 74.89 C </line>
<line>ATOM 2877 CA GLN A 407 -20.887 13.177 30.574 1.00 70.07 C </line>
<line>ATOM 2886 CA SER A 410 -25.727 13.409 26.918 1.00 93.11 C </line>
<line>ATOM 2891 CA ASP A 411 -26.757 10.087 25.347 1.00 91.09 C </line>
<line>ATOM 2899 CA LEU A 412 -27.584 7.769 28.249 1.00 87.11 C </line>
<line>ATOM 2907 CA ASP A 413 -30.395 5.226 28.551 1.00 89.72 C </line>
<line>ATOM 2915 CA ALA A 414 -33.139 4.957 31.196 1.00 85.47 C </line>
<line>ATOM 2920 CA SER A 415 -31.420 2.670 33.736 1.00 80.24 C </line>
<line>ATOM 2926 CA THR A 416 -27.943 4.281 33.814 1.00 78.98 C </line>
<line>ATOM 2933 CA LYS A 417 -29.434 7.806 34.018 1.00 72.22 C </line>
</atom-coordinate>
<distance-map>
<line> LYS THR SER ALA ASP LEU ASP SER GLN ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 8.64 9.48 13.10 13.48 11.96 8.96 10.06 8.40 3.86 </line>
<line>GLN CA 10.67 11.81 15.21 14.77 12.56 8.92 8.45 6.07 </line>
<line>SER CA 9.77 11.65 13.94 12.03 9.56 6.09 3.82 </line>
<line>ASP CA 9.36 10.33 12.13 10.06 6.87 3.81 </line>
<line>LEU CA 6.06 6.58 8.42 6.89 3.80 </line>
<line>ASP CA 6.12 5.88 5.87 3.82 </line>
<line>ALA CA 5.46 5.86 3.83 </line>
<line>SER CA 5.51 3.83 </line>
<line>THR CA 3.83 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ALA CA 194</line>
<line>GLN CA 128</line>
<line>SER CA 110</line>
<line>ASP CA 107</line>
<line>LEU CA 138</line>
<line>ASP CA 120</line>
<line>ALA CA 132</line>
<line>SER CA 183</line>
<line>THR CA 223</line>
<line>LYS CA 231</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BMF</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1BMFB</entryIDChain>
<sequence>AQFGSDLDAATQ</sequence>
<secondary-structure> HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 6603 CA ALA B 404 83.132 90.613 86.135 0.00 99.80 C </line>
<line>ATOM 6608 CA GLN B 405 82.117 94.082 84.963 0.00 99.80 C </line>
<line>ATOM 6617 CA PHE B 406 78.353 93.645 85.133 0.00 99.80 C </line>
<line>ATOM 6628 CA GLY B 407 77.518 92.161 88.494 0.00 99.80 C </line>
<line>ATOM 6632 CA SER B 408 74.403 92.932 90.519 0.00 99.80 C </line>
<line>ATOM 6638 CA ASP B 409 75.195 92.777 94.223 0.00 99.80 C </line>
<line>ATOM 6646 CA LEU B 410 73.422 92.276 97.527 1.00 97.93 C </line>
<line>ATOM 6654 CA ASP B 411 74.278 92.477 101.210 1.00 94.95 C </line>
<line>ATOM 6662 CA ALA B 412 74.795 95.871 102.810 1.00 91.94 C </line>
<line>ATOM 6667 CA ALA B 413 78.138 94.963 104.410 1.00 88.18 C </line>
<line>ATOM 6672 CA THR B 414 79.836 93.531 101.329 1.00 85.36 C </line>
<line>ATOM 6679 CA GLN B 415 78.256 96.482 99.522 1.00 81.91 C </line>
</atom-coordinate>
<distance-map>
<line> GLN THR ALA ALA ASP LEU ASP SER GLY PHE GLN ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 15.41 15.82 19.44 19.37 17.58 15.06 11.54 10.04 6.28 5.75 3.80 </line>
<line>GLN CA 15.25 16.53 19.87 19.37 18.11 15.39 11.63 9.58 6.11 3.79 </line>
<line>PHE CA 14.67 16.26 19.32 18.17 16.63 13.41 9.66 6.72 3.77 </line>
<line>GLY CA 11.87 13.11 16.17 15.04 13.13 9.92 6.21 3.79 </line>
<line>SER CA 10.42 12.11 14.53 12.64 10.70 7.11 3.79 </line>
<line>ASP CA 7.15 8.52 10.83 9.14 7.05 3.78 </line>
<line>LEU CA 6.71 7.56 8.77 6.54 3.79 </line>
<line>ASP CA 5.89 5.66 5.60 3.79 </line>
<line>ALA CA 4.81 5.75 3.82 </line>
<line>ALA CA 5.12 3.80 </line>
<line>THR CA 3.80 </line>
<line>GLN CA </line>
</distance-map>
<n14>
<line>ALA CA 107</line>
<line>GLN CA 109</line>
<line>PHE CA 87</line>
<line>GLY CA 117</line>
<line>SER CA 117</line>
<line>ASP CA 145</line>
<line>LEU CA 109</line>
<line>ASP CA 109</line>
<line>ALA CA 127</line>
<line>ALA CA 166</line>
<line>THR CA 196</line>
<line>GLN CA 215</line>
</n14>
</entryChain>
<parallel>
<x>-105.01899719238281</x>
<y>-84.7760009765625</y>
<z>-63.15700149536133</z>
</parallel>
<rotation>
<x>0.48399999737739563</x>
<y>0.0860000029206276</y>
<z>0.8709999918937683</z>
<x>-0.6899999976158142</x>
<y>0.6499999761581421</y>
<z>0.3190000057220459</z>
<x>-0.5389999747276306</x>
<y>-0.7549999952316284</y>
<z>0.37400001287460327</z>
</rotation>
<rmsd>3.531708002090454</rmsd>
<dmax>4.536596775054932</dmax>
</indel>