NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BP2A-3DIHA
confEVID 1BP2A-3DIHA
pdbIDA 1BP2
pdbIDB 3DIH
pdbChainA A
pdbChainB A
identity 0.375999987125397
indelSize 2
alignment <alignment>
<seq1>ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKV--PYNKEHKNLDKKNC-------</seq1>
<seq2>SVIEFGKMIQEET-DKNPLTSYSFYGCHCGLGNKGKPKDATDRCCFVHSCCYAKLSDC--------SPKTNRYEYHRENGAIVCGSS-TPCKKQICECDRAAAICFRENLKTYNKKYKVYLRFKCKGVSEKC</seq2>
<ss_1> HHHHHHHHHH HHHHHHHHHHHHHHHGGG HHHHH HHHH EEEEE EEEEE HHHHHHHHHHHHHHHHGGG -- GGG -------</ss_1>
<ss_2> HHHHHHHHH - HHHHHHHHHHHHHHH GGG-------- EEEEE EEE - HHHHHHHHHHHHHHHHHHH GGG GGG GGG </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BP2</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BP2A</entryIDChain>
<sequence>CFSKV--PYNKE</sequence>
<secondary-structure>HGGG -- GG</secondary-structure>
<atom-coordinate>
<line>ATOM 799 CA CYS A 105 19.252 16.761 15.898 1.00 1.78 C </line>
<line>ATOM 805 CA PHE A 106 15.661 15.473 15.640 1.00 3.15 C </line>
<line>ATOM 816 CA SER A 107 14.783 18.475 13.492 1.00 3.84 C </line>
<line>ATOM 822 CA LYS A 108 17.657 17.916 11.062 1.00 5.21 C </line>
<line>ATOM 831 CA VAL A 109 17.228 14.234 10.180 1.00 5.83 C </line>
<line>ATOM 838 CA PRO A 110 14.737 12.203 8.188 1.00 12.34 C </line>
<line>ATOM 845 CA TYR A 111 11.911 10.315 9.942 1.00 10.27 C </line>
<line>ATOM 857 CA ASN A 112 11.506 6.699 8.752 1.00 7.69 C </line>
<line>ATOM 865 CA LYS A 113 8.093 5.552 9.903 1.00 14.58 C </line>
<line>ATOM 874 CA GLU A 114 9.077 1.962 9.281 1.00 14.73 C </line>
</atom-coordinate>
<distance-map>
<line> GLU LYS ASN TYR PRO VAL LYS SER PHE CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 19.14 16.91 14.57 11.44 10.03 6.57 5.22 5.36 3.82 </line>
<line>PHE CA 16.32 13.73 11.90 8.55 8.19 5.81 5.56 3.79 </line>
<line>SER CA 17.97 14.99 13.11 9.35 8.21 5.91 3.80 </line>
<line>LYS CA 18.20 15.67 13.00 9.59 7.03 3.81 </line>
<line>VAL CA 14.76 12.61 9.57 6.61 3.78 </line>
<line>PRO CA 11.75 9.56 6.41 3.82 </line>
<line>TYR CA 8.85 6.10 3.83 </line>
<line>ASN CA 5.35 3.78 </line>
<line>LYS CA 3.77 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>CYS CA 335</line>
<line>PHE CA 405</line>
<line>SER CA 320</line>
<line>LYS CA 240</line>
<line>VAL CA 248</line>
<line>PRO CA 225</line>
<line>TYR CA 288</line>
<line>ASN CA 231</line>
<line>LYS CA 217</line>
<line>GLU CA 200</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3DIH</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>3DIHA</entryIDChain>
<sequence>CFRENLKTYNKK</sequence>
<secondary-structure>HHHH GGG GG</secondary-structure>
<atom-coordinate>
<line>ATOM 722 CA CYS A 95 72.245 22.685 6.343 1.00 14.99 C </line>
<line>ATOM 728 CA PHE A 96 72.920 23.836 2.744 1.00 20.42 C </line>
<line>ATOM 739 CA ARG A 97 71.157 27.104 3.334 1.00 25.38 C </line>
<line>ATOM 750 CA GLU A 98 72.847 27.790 6.687 1.00 24.71 C </line>
<line>ATOM 759 CA ASN A 99 76.168 27.352 4.948 1.00 17.81 C </line>
<line>ATOM 767 CA LEU A 100 75.715 29.421 1.745 1.00 18.01 C </line>
<line>ATOM 775 CA LYS A 101 78.184 31.922 3.186 1.00 27.17 C </line>
<line>ATOM 784 CA THR A 102 81.029 29.436 2.517 1.00 20.77 C </line>
<line>ATOM 791 CA TYR A 103 79.739 27.797 -0.667 1.00 22.18 C </line>
<line>ATOM 803 CA ASN A 104 82.741 27.454 -2.950 1.00 23.11 C </line>
<line>ATOM 811 CA LYS A 105 82.308 27.462 -6.745 1.00 30.29 C </line>
<line>ATOM 820 CA LYS A 106 85.705 25.807 -7.095 1.00 34.63 C </line>
</atom-coordinate>
<distance-map>
<line> LYS LYS ASN TYR THR LYS LEU ASN GLU ARG PHE CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 19.27 17.19 14.81 11.46 11.72 11.43 8.86 6.25 5.15 5.46 3.84 </line>
<line>PHE CA 16.25 13.83 11.91 8.59 9.86 9.66 6.32 5.27 5.58 3.76 </line>
<line>ARG CA 17.95 15.04 13.18 9.49 10.18 8.52 5.35 5.27 3.82 </line>
<line>GLU CA 18.95 16.43 13.82 10.08 9.33 7.60 5.94 3.77 </line>
<line>ASN CA 15.44 13.21 10.28 6.67 5.82 5.30 3.84 </line>
<line>LEU CA 13.82 10.93 8.68 4.96 5.37 3.80 </line>
<line>LYS CA 14.13 11.64 8.85 5.85 3.84 </line>
<line>THR CA 11.29 9.56 6.06 3.81 </line>
<line>TYR CA 8.99 6.61 3.79 </line>
<line>ASN CA 5.36 3.82 </line>
<line>LYS CA 3.79 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>CYS CA 360</line>
<line>PHE CA 412</line>
<line>ARG CA 323</line>
<line>GLU CA 248</line>
<line>ASN CA 273</line>
<line>LEU CA 283</line>
<line>LYS CA 191</line>
<line>THR CA 226</line>
<line>TYR CA 308</line>
<line>ASN CA 266</line>
<line>LYS CA 251</line>
<line>LYS CA 229</line>
</n14>
</entryChain>
<parallel>
<x>-60.763999938964844</x>
<y>-12.67199993133545</y>
<z>8.774999618530273</z>
</parallel>
<rotation>
<x>0.1720000058412552</x>
<y>-0.8429999947547913</y>
<z>-0.5099999904632568</z>
<x>-0.38499999046325684</x>
<y>0.4189999997615814</y>
<z>-0.8220000267028809</z>
<x>0.9070000052452087</x>
<y>0.33799999952316284</y>
<z>-0.2529999911785126</z>
</rotation>
<rmsd>0.807466983795166</rmsd>
<dmax>1.7975519895553589</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>3DIH</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>3DIHA</entryIDChain>
<sequence>VCGSS-TPCKK</sequence>
<secondary-structure>E - HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 575 CA VAL A 74 57.387 20.136 8.495 1.00 21.02 C </line>
<line>ATOM 582 CA CYS A 75 57.541 16.509 7.390 1.00 25.63 C </line>
<line>ATOM 588 CA GLY A 76 53.970 15.421 7.128 1.00 40.99 C </line>
<line>ATOM 592 CA SER A 77 53.718 11.674 6.777 1.00 47.38 C </line>
<line>ATOM 598 CA SER A 78 52.463 8.949 9.102 1.00 49.33 C </line>
<line>ATOM 604 CA THR A 79 54.549 5.994 7.733 1.00 41.25 C </line>
<line>ATOM 611 CA PRO A 80 57.632 5.855 9.989 1.00 30.64 C </line>
<line>ATOM 618 CA CYS A 81 59.868 5.439 6.975 1.00 22.01 C </line>
<line>ATOM 624 CA LYS A 82 58.408 8.422 5.146 1.00 20.06 C </line>
<line>ATOM 633 CA LYS A 83 58.793 10.607 8.213 1.00 25.97 C </line>
</atom-coordinate>
<distance-map>
<line> LYS LYS CYS PRO THR SER SER GLY CYS VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 9.64 12.23 14.98 14.36 14.44 12.24 9.38 5.98 3.79 </line>
<line>CYS CA 6.09 8.44 11.32 10.97 10.94 9.27 6.19 3.74 </line>
<line>GLY CA 6.90 8.52 11.60 10.64 9.46 6.93 3.77 </line>
<line>SER CA 5.38 5.94 8.76 7.71 5.82 3.80 </line>
<line>SER CA 6.60 7.16 8.47 6.09 3.87 </line>
<line>THR CA 6.29 5.24 5.40 3.82 </line>
<line>PRO CA 5.20 5.54 3.78 </line>
<line>CYS CA 5.42 3.79 </line>
<line>LYS CA 3.79 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>VAL CA 265</line>
<line>CYS CA 307</line>
<line>GLY CA 245</line>
<line>SER CA 228</line>
<line>SER CA 157</line>
<line>THR CA 176</line>
<line>PRO CA 193</line>
<line>CYS CA 250</line>
<line>LYS CA 305</line>
<line>LYS CA 298</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BP2</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BP2A</entryIDChain>
<sequence>TCSSENNACEA</sequence>
<secondary-structure>EEE HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 640 CA THR A 83 17.884 28.942 24.717 1.00 4.79 C </line>
<line>ATOM 647 CA CYS A 84 18.967 27.266 27.924 1.00 11.63 C </line>
<line>ATOM 653 CA SER A 85 18.805 29.718 30.824 1.00 6.43 C </line>
<line>ATOM 659 CA SER A 86 21.922 31.414 32.083 1.00 8.10 C </line>
<line>ATOM 665 CA GLU A 87 20.518 31.015 35.563 1.00 6.87 C </line>
<line>ATOM 674 CA ASN A 88 20.964 27.211 35.285 1.00 9.07 C </line>
<line>ATOM 682 CA ASN A 89 23.567 25.696 37.612 1.00 3.67 C </line>
<line>ATOM 690 CA ALA A 90 26.375 23.593 36.181 1.00 6.15 C </line>
<line>ATOM 695 CA CYS A 91 24.418 20.293 36.310 1.00 1.45 C </line>
<line>ATOM 701 CA GLU A 92 21.117 21.760 35.115 1.00 3.02 C </line>
<line>ATOM 710 CA ALA A 93 22.978 23.471 32.334 1.00 5.11 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU CYS ALA ASN ASN GLU SER SER CYS THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 10.67 13.04 15.87 15.24 14.46 11.14 11.35 8.76 6.22 3.78 </line>
<line>CYS CA 7.07 9.31 12.19 11.69 10.84 7.63 8.65 6.58 3.80 </line>
<line>SER CA 7.66 9.33 12.27 11.11 9.22 5.55 5.20 3.77 </line>
<line>SER CA 8.02 10.15 12.16 9.89 8.12 5.37 3.77 </line>
<line>GLU CA 8.57 9.29 11.43 9.47 6.46 3.84 </line>
<line>ASN CA 5.17 5.46 7.80 6.57 3.81 </line>
<line>ASN CA 5.76 5.27 5.62 3.79 </line>
<line>ALA CA 5.13 5.67 3.84 </line>
<line>CYS CA 5.29 3.80 </line>
<line>GLU CA 3.76 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>THR CA 280</line>
<line>CYS CA 310</line>
<line>SER CA 231</line>
<line>SER CA 162</line>
<line>GLU CA 155</line>
<line>ASN CA 230</line>
<line>ASN CA 219</line>
<line>ALA CA 242</line>
<line>CYS CA 312</line>
<line>GLU CA 357</line>
<line>ALA CA 328</line>
</n14>
</entryChain>
<parallel>
<x>34.33399963378906</x>
<y>-15.994999885559082</y>
<z>-24.702999114990234</z>
</parallel>
<rotation>
<x>0.14399999380111694</x>
<y>-0.4390000104904175</y>
<z>0.8870000243186951</z>
<x>-0.8899999856948853</x>
<y>0.33500000834465027</y>
<z>0.3100000023841858</z>
<x>-0.43299999833106995</x>
<y>-0.8339999914169312</y>
<z>-0.34200000762939453</z>
</rotation>
<rmsd>1.7571909427642822</rmsd>
<dmax>3.4762980937957764</dmax>
</indel>