NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BSEA-3DA7A
confEVID 1BSEA-3DA7A
pdbIDA 1BSE
pdbIDB 3DA7
pdbChainA A
pdbChainB A
identity 0.907700002193451
indelSize 1
alignment <alignment>
<seq1>--------------------------------------------VINTF-DGVADYLQTYHKLPDNYITKSEAQALGWVASKGNLADVAPGKSIGGDIFSNREGKLPGKSGRTWREADINYTSGFRNSDRIVYSSDWLIYKTTDHYQTFTKIR</seq1>
<seq2>RTWREADINYTSGFRNSDRILYSSDWLIYKTTDHYQTFTKIRCAQVINTFDGVADYLQTYHKLPDNYITKSEAQALGWVASKGNLADVAPGKSIGGDIFSNREGKLPGK--------------------------------------------</seq2>
<ss_1>-------------------------------------------- H-HHHHHHHH HHHHHH HHHH EE EEEEE EEEEEE EEEEE </ss_1>
<ss_2> EEEE EEEEEE EEEEE HHHHHHHHHHHH HHHHHH HHHH EE EEE --------------------------------------------</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BSE</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BSEA</entryIDChain>
<sequence>VINTF-DGVAD</sequence>
<secondary-structure> H-HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2 CA VAL A 3 18.155 38.890 44.828 1.00 33.78 C </line>
<line>ATOM 9 CA ILE A 4 19.912 41.852 46.346 1.00 26.35 C </line>
<line>ATOM 17 CA ASN A 5 20.677 44.194 43.373 1.00 24.87 C </line>
<line>ATOM 25 CA THR A 6 19.331 47.671 44.149 1.00 21.12 C </line>
<line>ATOM 32 CA PHE A 7 21.487 50.755 44.956 1.00 19.31 C </line>
<line>ATOM 43 CA ASP A 8 20.411 50.850 48.588 1.00 21.30 C </line>
<line>ATOM 51 CA GLY A 9 20.397 47.106 49.139 1.00 19.31 C </line>
<line>ATOM 55 CA VAL A 10 23.836 46.509 47.781 1.00 19.60 C </line>
<line>ATOM 62 CA ALA A 11 25.211 49.735 49.337 1.00 20.40 C </line>
<line>ATOM 67 CA ASP A 12 23.986 48.656 52.815 1.00 24.44 C </line>
</atom-coordinate>
<distance-map>
<line> ASP ALA VAL GLY ASP PHE THR ASN ILE VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 13.90 13.70 9.95 9.55 12.74 12.32 8.89 6.05 3.76 </line>
<line>ILE CA 10.23 9.96 6.26 5.97 9.29 9.15 6.25 3.86 </line>
<line>ASN CA 10.95 9.32 5.90 6.47 8.46 6.80 3.81 </line>
<line>THR CA 9.89 8.11 5.90 5.13 5.57 3.85 </line>
<line>PHE CA 8.51 5.84 5.61 5.66 3.79 </line>
<line>ASP CA 5.95 4.98 5.59 3.78 </line>
<line>GLY CA 5.37 5.49 3.75 </line>
<line>VAL CA 5.47 3.84 </line>
<line>ALA CA 3.84 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>VAL CA 221</line>
<line>ILE CA 276</line>
<line>ASN CA 351</line>
<line>THR CA 308</line>
<line>PHE CA 351</line>
<line>ASP CA 282</line>
<line>GLY CA 286</line>
<line>VAL CA 380</line>
<line>ALA CA 375</line>
<line>ASP CA 277</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3DA7</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>3DA7A</entryIDChain>
<sequence>QVINTFDGVAD</sequence>
<secondary-structure> HHHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 383 CA GLN A 48 -4.071 -21.384 17.905 1.00 45.46 C </line>
<line>ATOM 392 CA VAL A 49 -1.355 -20.861 15.302 1.00 47.24 C </line>
<line>ATOM 399 CA ILE A 50 -3.388 -22.147 12.362 1.00 54.26 C </line>
<line>ATOM 407 CA ASN A 51 -2.976 -19.598 9.573 1.00 63.33 C </line>
<line>ATOM 415 CA THR A 52 -0.093 -17.491 8.260 1.00 47.09 C </line>
<line>ATOM 422 CA PHE A 53 -1.266 -14.238 9.862 1.00 40.10 C </line>
<line>ATOM 433 CA ASP A 54 -1.076 -16.134 13.166 1.00 41.55 C </line>
<line>ATOM 441 CA GLY A 55 2.245 -17.668 12.151 1.00 39.04 C </line>
<line>ATOM 445 CA VAL A 56 3.990 -14.385 11.370 1.00 30.96 C </line>
<line>ATOM 452 CA ALA A 57 2.493 -12.459 14.286 1.00 29.62 C </line>
<line>ATOM 457 CA ASP A 58 3.752 -15.094 16.737 1.00 35.20 C </line>
</atom-coordinate>
<distance-map>
<line> ASP ALA VAL GLY ASP PHE THR ASN ILE VAL GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 10.11 11.65 12.52 9.32 7.68 11.12 11.14 8.59 5.64 3.80 </line>
<line>VAL CA 7.84 9.30 9.27 5.75 5.19 8.57 7.91 6.09 3.80 </line>
<line>ILE CA 10.95 11.50 10.75 7.20 6.49 8.56 7.03 3.80 </line>
<line>ASN CA 10.81 10.15 8.88 6.13 5.34 5.63 3.80 </line>
<line>THR CA 9.61 8.27 6.00 4.54 5.18 3.81 </line>
<line>PHE CA 8.55 6.07 5.47 5.42 3.81 </line>
<line>ASP CA 6.09 5.24 5.65 3.80 </line>
<line>GLY CA 5.47 5.64 3.80 </line>
<line>VAL CA 5.42 3.80 </line>
<line>ALA CA 3.81 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>GLN CA 116</line>
<line>VAL CA 160</line>
<line>ILE CA 131</line>
<line>ASN CA 204</line>
<line>THR CA 300</line>
<line>PHE CA 366</line>
<line>ASP CA 297</line>
<line>GLY CA 298</line>
<line>VAL CA 383</line>
<line>ALA CA 394</line>
<line>ASP CA 293</line>
</n14>
</entryChain>
<parallel>
<x>21.365999221801758</x>
<y>64.68699645996094</y>
<z>33.63399887084961</z>
</parallel>
<rotation>
<x>0.9139999747276306</x>
<y>0.017000000923871994</y>
<z>0.4059999883174896</z>
<x>-0.33899998664855957</x>
<y>0.5839999914169312</y>
<z>0.7379999756813049</z>
<x>-0.22499999403953552</x>
<y>-0.8119999766349792</y>
<z>0.5389999747276306</z>
</rotation>
<rmsd>2.506545066833496</rmsd>
<dmax>4.1748881340026855</dmax>
</indel>