NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BUDA-1WNIA
confEVID 1BUDA-1WNIA
pdbIDA 1BUD
pdbIDB 1WNI
pdbChainA A
pdbChainB A
identity 0.517799973487854
indelSize 1
alignment <alignment>
<seq1>-FQRYMEIVIVVDHSMVKKYNGDSDSIKAWVYEMINTITESYSYLKIDISLSGLEIWSGKDLIDVEASAGNTLKSFGEWRAKDLIHRISHDNAQLLTATDFDGATIGLAYVASMCNPKRSVGVIQDHSSVNRLVAITLAHEMAHNLGVSHDEGSCSCGGKSCIMSPSISDETIKYFSDCSYIQCRDYISKENPPCILN-</seq1>
<seq2>FPQRYIELAIVVDHGMYKKYNQNSDKIKVRVHQMVNHINEMYRPLNIAISLNRLQIWSKKDLITVKSASNVTLESFGNWRETVLLKQQNNDCAHLLTATNLNDNTIGLAYKKGMCNPKLSVGLVQDYSPNVFMVAVTMTHELGHNLGMEHDD-KDKCKCEACIMSDVISDKPSKLFSDCSKNDYQTFLTKYNPQCILNA</seq2>
<ss_1>- EEEEEEEEE HHHHHH HHHHHHHHHHHHHHHHHHHH EEE EEEE HHHHHHHHHHHIIIIIHHHH EEEEEE EEEEE EEEEEE HHHHHHHHHHHHHHH HHHHHHHHHHHHHH -</ss_1>
<ss_2> EEEEEEEEE HHHHHH HHHHHHHHHHHHHHHHHHH EEE EEEE HHHHHHHHHHHIIIII EEEEEE GGG EEEEE EEEEEE HHHHHHHHHHHHHHH -HHHH HHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1WNI</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1WNIA</entryIDChain>
<sequence>MEHDD-KDKCK</sequence>
<secondary-structure> -HHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 1185 CA MET A 150 23.011 45.089 1.923 1.00 22.56 C </line>
<line>ATOM 1193 CA GLU A 151 20.546 43.107 -0.230 1.00 34.56 C </line>
<line>ATOM 1202 CA HIS A 152 17.148 41.775 0.691 1.00 26.59 C </line>
<line>ATOM 1212 CA ASP A 153 16.801 38.529 2.558 1.00 36.46 C </line>
<line>ATOM 1220 CA ASP A 154 16.075 35.418 0.569 1.00 47.91 C </line>
<line>ATOM 1228 CA LYS A 155 14.207 34.233 3.689 1.00 59.57 C </line>
<line>ATOM 1237 CA ASP A 156 14.298 30.715 2.186 1.00 55.43 C </line>
<line>ATOM 1245 CA LYS A 157 18.042 30.475 2.568 1.00 46.25 C </line>
<line>ATOM 1254 CA CYS A 158 18.654 33.380 5.022 1.00 37.39 C </line>
<line>ATOM 1260 CA LYS A 159 16.308 31.721 7.466 1.00 37.15 C </line>
</atom-coordinate>
<distance-map>
<line> LYS CYS LYS ASP LYS ASP ASP HIS GLU MET </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>MET CA 15.95 12.87 15.45 16.81 14.09 11.98 9.06 6.85 3.83 </line>
<line>GLU CA 14.38 11.22 13.18 14.09 11.59 8.93 6.54 3.76 </line>
<line>HIS CA 12.15 9.57 11.49 11.52 8.63 6.45 3.76 </line>
<line>ASP CA 8.41 6.00 8.15 8.21 5.14 3.76 </line>
<line>ASP CA 7.83 5.53 5.68 5.28 3.82 </line>
<line>LYS CA 5.00 4.72 5.49 3.83 </line>
<line>ASP CA 5.74 5.84 3.77 </line>
<line>LYS CA 5.34 3.85 </line>
<line>CYS CA 3.77 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>MET CA 414</line>
<line>GLU CA 349</line>
<line>HIS CA 350</line>
<line>ASP CA 289</line>
<line>ASP CA 210</line>
<line>LYS CA 205</line>
<line>ASP CA 138</line>
<line>LYS CA 148</line>
<line>CYS CA 209</line>
<line>LYS CA 177</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BUD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BUDA</entryIDChain>
<sequence>VSHDEGSCSCG</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 1143 CA VAL A 150 27.999 20.185 20.062 1.00 13.40 C </line>
<line>ATOM 1150 CA SER A 151 26.071 23.424 19.505 1.00 13.96 C </line>
<line>ATOM 1156 CA HIS A 152 22.980 24.248 17.436 1.00 13.98 C </line>
<line>ATOM 1166 CA ASP A 153 22.979 24.188 13.632 1.00 13.46 C </line>
<line>ATOM 1174 CA GLU A 154 23.035 27.516 11.809 1.00 16.31 C </line>
<line>ATOM 1183 CA GLY A 155 23.590 28.877 8.327 1.00 13.85 C </line>
<line>ATOM 1187 CA SER A 156 24.509 26.265 5.750 1.00 16.50 C </line>
<line>ATOM 1193 CA CYS A 157 24.868 23.292 8.145 1.00 15.29 C </line>
<line>ATOM 1199 CA SER A 158 23.173 20.246 6.573 1.00 16.20 C </line>
<line>ATOM 1205 CA CYS A 159 22.224 16.552 6.763 1.00 19.11 C </line>
<line>ATOM 1211 CA GLY A 160 20.849 16.345 3.201 1.00 26.94 C </line>
</atom-coordinate>
<distance-map>
<line> GLY CYS SER CYS SER GLY GLU ASP HIS SER VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 18.71 14.95 14.33 12.71 15.94 15.25 12.10 9.09 6.97 3.81 </line>
<line>SER CA 18.53 14.98 13.63 11.42 14.13 12.68 9.23 6.68 3.81 </line>
<line>HIS CA 16.42 13.18 11.58 9.53 11.96 10.24 6.51 3.80 </line>
<line>ASP CA 13.22 10.30 8.09 5.87 8.29 7.11 3.80 </line>
<line>GLU CA 14.27 12.10 8.96 5.88 6.36 3.78 </line>
<line>GLY CA 13.81 12.50 8.82 5.73 3.78 </line>
<line>SER CA 10.88 10.03 6.22 3.83 </line>
<line>CYS CA 9.43 7.37 3.82 </line>
<line>SER CA 5.66 3.82 </line>
<line>CYS CA 3.82 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>VAL CA 389</line>
<line>SER CA 321</line>
<line>HIS CA 323</line>
<line>ASP CA 281</line>
<line>GLU CA 195</line>
<line>GLY CA 143</line>
<line>SER CA 143</line>
<line>CYS CA 220</line>
<line>SER CA 237</line>
<line>CYS CA 266</line>
<line>GLY CA 184</line>
</n14>
</entryChain>
<parallel>
<x>-6.935999870300293</x>
<y>13.746999740600586</y>
<z>-11.119999885559082</z>
</parallel>
<rotation>
<x>0.16300000250339508</x>
<y>0.2800000011920929</y>
<z>0.9459999799728394</z>
<x>-0.9440000057220459</x>
<y>0.3230000138282776</y>
<z>0.06700000166893005</z>
<x>0.28700000047683716</x>
<y>0.9039999842643738</y>
<z>-0.31700000166893005</z>
</rotation>
<rmsd>2.4446210861206055</rmsd>
<dmax>3.6308650970458984</dmax>
</indel>