NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BUNA-2NOTA
confEVID 1BUNA-2NOTA
pdbIDA 1BUN
pdbIDB 2NOT
pdbChainA A
pdbChainB A
identity 0.466699987649918
indelSize 1
alignment <alignment>
<seq1>NLINFMEMIRYTIPCEKTWGEYADYGCYCGAGGSGRPIDALDRCCYVHDNCYGDAEKKHKCNPKTQSYSYKLTKRTIICYGAAGTCARIVCDCDRTAALCFGNSEYIEGHKNIDTARFCQ</seq1>
<seq2>NLVQFSYLIQCANHGRRPTRHYMDYGCYCGWGGSGTPVDELDRCCKIHDDCYSDAEKK-GCSPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAKAPYNNANWNIDTKKRCQ</seq2>
<ss_1> HHHHHHHH HHHH HHHHHHHHHHHHHHHHH EEE EEE HHHHHHHHHHHHHHHHH EEGGG HHHH </ss_1>
<ss_2> HHHHHHHHHH HHHH HHHHHHHHHHHHHHHHH - HHHH EEE EEE HHHHHHHHHHHHHHHHHHH GGG HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2NOT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2NOTA</entryIDChain>
<sequence>DAEKK-GCSPK</sequence>
<secondary-structure>HHH - HH</secondary-structure>
<atom-coordinate>
<line>ATOM 426 CA ASP A 54 2.288 18.071 42.980 1.00 6.55 C </line>
<line>ATOM 434 CA ALA A 55 0.720 17.168 39.669 1.00 2.00 C </line>
<line>ATOM 439 CA GLU A 56 -2.454 15.959 41.385 1.00 3.02 C </line>
<line>ATOM 448 CA LYS A 57 -2.556 19.164 43.522 1.00 2.33 C </line>
<line>ATOM 457 CA LYS A 59 -2.467 21.275 40.298 1.00 2.00 C </line>
<line>ATOM 466 CA GLY A 60 -5.399 19.295 38.860 1.00 2.00 C </line>
<line>ATOM 470 CA CYS A 61 -3.214 17.052 36.722 1.00 2.00 C </line>
<line>ATOM 476 CA SER A 67 -4.165 13.354 36.918 1.00 5.61 C </line>
<line>ATOM 482 CA PRO A 68 -0.869 11.496 36.172 1.00 4.23 C </line>
<line>ATOM 489 CA LYS A 69 -2.915 8.416 35.297 1.00 11.82 C </line>
</atom-coordinate>
<distance-map>
<line> LYS PRO SER CYS GLY LYS LYS GLU ALA ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 13.39 9.98 10.03 8.39 8.81 6.33 5.00 5.43 3.77 </line>
<line>ALA CA 10.44 6.85 6.78 4.92 6.53 5.24 5.44 3.81 </line>
<line>GLU CA 9.70 7.04 5.45 4.85 5.12 5.43 3.85 </line>
<line>LYS CA 13.54 10.75 8.94 7.15 5.46 3.85 </line>
<line>LYS CA 13.80 10.73 8.78 5.58 3.82 </line>
<line>GLY CA 11.71 9.41 6.37 3.79 </line>
<line>CYS CA 8.76 6.06 3.82 </line>
<line>SER CA 5.35 3.86 </line>
<line>PRO CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ASP CA 212</line>
<line>ALA CA 265</line>
<line>GLU CA 213</line>
<line>LYS CA 147</line>
<line>LYS CA 167</line>
<line>GLY CA 168</line>
<line>CYS CA 246</line>
<line>SER CA 258</line>
<line>PRO CA 321</line>
<line>LYS CA 267</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BUN</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BUNA</entryIDChain>
<sequence>DAEKKHKCNPK</sequence>
<secondary-structure>HHH </secondary-structure>
<atom-coordinate>
<line>ATOM 418 CA ASP A 54 39.241 7.015 55.791 1.00 41.85 C </line>
<line>ATOM 426 CA ALA A 55 41.894 9.605 56.769 1.00 46.00 C </line>
<line>ATOM 431 CA GLU A 56 39.508 11.817 58.792 1.00 50.92 C </line>
<line>ATOM 440 CA LYS A 57 37.995 8.949 60.781 1.00 54.94 C </line>
<line>ATOM 449 CA LYS A 58 40.318 5.937 60.861 1.00 57.76 C </line>
<line>ATOM 458 CA HIS A 59 43.276 8.343 61.226 1.00 58.51 C </line>
<line>ATOM 468 CA LYS A 60 41.897 11.626 62.649 1.00 57.99 C </line>
<line>ATOM 477 CA CYS A 61 43.292 14.136 60.142 1.00 54.79 C </line>
<line>ATOM 483 CA ASN A 62 41.768 17.146 58.409 1.00 56.47 C </line>
<line>ATOM 491 CA PRO A 63 42.427 16.273 54.712 1.00 54.86 C </line>
<line>ATOM 498 CA LYS A 64 41.496 19.577 53.088 1.00 54.68 C </line>
</atom-coordinate>
<distance-map>
<line> LYS PRO ASN CYS LYS HIS LYS LYS GLU ALA ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 13.05 9.85 10.76 9.28 8.68 6.90 5.29 5.49 5.67 3.83 </line>
<line>ALA CA 10.64 7.00 7.72 5.82 6.22 4.83 5.72 5.63 3.83 </line>
<line>GLU CA 9.83 6.71 5.80 4.64 4.54 5.67 6.29 3.80 </line>
<line>LYS CA 13.58 10.49 9.33 7.44 5.09 5.33 3.80 </line>
<line>LYS CA 15.74 12.21 11.57 8.75 6.17 3.83 </line>
<line>HIS CA 13.99 10.30 9.36 5.89 3.83 </line>
<line>LYS CA 12.44 9.21 6.96 3.81 </line>
<line>CYS CA 9.09 5.90 3.79 </line>
<line>ASN CA 5.86 3.86 </line>
<line>PRO CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ASP CA 223</line>
<line>ALA CA 263</line>
<line>GLU CA 219</line>
<line>LYS CA 156</line>
<line>LYS CA 149</line>
<line>HIS CA 186</line>
<line>LYS CA 175</line>
<line>CYS CA 231</line>
<line>ASN CA 249</line>
<line>PRO CA 321</line>
<line>LYS CA 295</line>
</n14>
</entryChain>
<parallel>
<x>-42.89500045776367</x>
<y>6.888000011444092</y>
<z>-19.229999542236328</z>
</parallel>
<rotation>
<x>0.2280000001192093</x>
<y>0.28299999237060547</y>
<z>-0.9319999814033508</z>
<x>-0.49000000953674316</x>
<y>-0.7929999828338623</y>
<z>-0.3610000014305115</z>
<x>-0.8410000205039978</x>
<y>0.5389999747276306</y>
<z>-0.041999999433755875</z>
</rotation>
<rmsd>1.0832339525222778</rmsd>
<dmax>2.413940906524658</dmax>
</indel>