NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BVXA-1QSWA
confEVID 1BVXA-1QSWA
pdbIDA 1BVX
pdbIDB 1QSW
pdbChainA A
pdbChainB A
identity 0.53030002117157
indelSize 2
alignment <alignment>
<seq1>KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNT-DGSTDYGILQINSRWWCND--GRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL</seq1>
<seq2>KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSR-YCANDGKTPGAVNA-CHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV</seq2>
<ss_1> HHHHHHHHHH GGG HHHHHHHHHH EEEEE - EEEEE EE -- GGGG HHHHHHHHHHH GGGG HHHHH GGGGG </ss_1>
<ss_2> HHHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EEE - - GGGG HHHHHHHHHGGG GGGG HHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BVX</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BVXA</entryIDChain>
<sequence>TNRNT-DGSTD</sequence>
<secondary-structure>EEEE - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 333 CA THR A 43 10.670 16.046 17.879 1.00 12.37 C </line>
<line>ATOM 340 CA ASN A 44 12.813 18.983 18.993 1.00 15.50 C </line>
<line>ATOM 348 CA ARG A 45 15.247 19.198 21.889 1.00 18.45 C </line>
<line>ATOM 359 CA ASN A 46 15.178 22.269 24.123 1.00 21.93 C </line>
<line>ATOM 367 CA THR A 47 18.211 23.851 25.851 1.00 26.91 C </line>
<line>ATOM 374 CA ASP A 48 16.853 22.797 29.252 1.00 24.38 C </line>
<line>ATOM 382 CA GLY A 49 17.087 19.132 28.267 1.00 20.25 C </line>
<line>ATOM 386 CA SER A 50 13.334 18.668 27.711 1.00 15.73 C </line>
<line>ATOM 392 CA THR A 51 11.945 17.633 24.304 1.00 11.63 C </line>
<line>ATOM 399 CA ASP A 52 8.852 18.584 22.271 1.00 11.34 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR SER GLY ASP THR ASN ARG ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 5.39 6.74 10.52 12.59 14.60 13.47 9.90 6.85 3.80 </line>
<line>ASN CA 5.16 5.55 8.74 10.21 11.67 9.99 6.54 3.79 </line>
<line>ARG CA 6.44 4.38 6.15 6.64 8.35 6.79 3.80 </line>
<line>ASN CA 7.55 5.65 5.41 5.54 5.42 3.83 </line>
<line>THR CA 11.32 8.96 7.36 5.42 3.81 </line>
<line>ASP CA 11.42 8.67 5.64 3.80 </line>
<line>GLY CA 10.20 6.66 3.82 </line>
<line>SER CA 7.05 3.82 </line>
<line>THR CA 3.82 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>THR CA 299</line>
<line>ASN CA 276</line>
<line>ARG CA 216</line>
<line>ASN CA 206</line>
<line>THR CA 141</line>
<line>ASP CA 160</line>
<line>GLY CA 193</line>
<line>SER CA 259</line>
<line>THR CA 318</line>
<line>ASP CA 405</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1QSW</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1QSWA</entryIDChain>
<sequence>TNYNAGDRSTD</sequence>
<secondary-structure>EEEE EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 343 CA THR A 43 -1.221 -11.164 -4.945 1.00 22.91 C </line>
<line>ATOM 350 CA ASN A 44 2.229 -12.351 -3.880 1.00 25.05 C </line>
<line>ATOM 358 CA TYR A 45 2.981 -15.423 -1.816 1.00 26.16 C </line>
<line>ATOM 370 CA ASN A 46 5.853 -15.226 0.719 1.00 29.88 C </line>
<line>ATOM 378 CA ALA A 47 7.402 -18.751 0.784 1.00 34.45 C </line>
<line>ATOM 383 CA GLY A 48 9.716 -17.507 3.473 1.00 41.25 C </line>
<line>ATOM 387 CA ASP A 49 7.009 -16.945 6.111 1.00 43.00 C </line>
<line>ATOM 395 CA ARG A 50 3.981 -18.704 4.619 1.00 39.90 C </line>
<line>ATOM 406 CA SER A 51 2.063 -15.443 4.076 1.00 30.49 C </line>
<line>ATOM 412 CA THR A 52 0.379 -13.612 1.204 1.00 24.04 C </line>
<line>ATOM 419 CA ASP A 53 0.384 -9.913 0.166 1.00 23.11 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR SER ARG ASP GLY ALA ASN TYR ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 5.50 6.81 10.51 13.24 14.95 15.19 12.84 9.93 6.75 3.80 </line>
<line>ASN CA 5.07 5.56 8.54 10.75 11.99 11.69 9.46 6.52 3.78 </line>
<line>TYR CA 6.41 4.38 5.96 7.29 9.02 8.81 6.11 3.84 </line>
<line>ASN CA 7.64 5.73 5.07 5.55 5.78 5.26 3.85 </line>
<line>ALA CA 11.30 8.71 7.09 5.14 5.64 3.76 </line>
<line>GLY CA 12.48 10.37 7.95 5.97 3.82 </line>
<line>ASP CA 11.34 8.90 5.56 3.81 </line>
<line>ARG CA 10.49 7.11 3.82 </line>
<line>SER CA 6.98 3.80 </line>
<line>THR CA 3.84 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>THR CA 278</line>
<line>ASN CA 256</line>
<line>TYR CA 190</line>
<line>ASN CA 178</line>
<line>ALA CA 110</line>
<line>GLY CA 103</line>
<line>ASP CA 155</line>
<line>ARG CA 170</line>
<line>SER CA 227</line>
<line>THR CA 273</line>
<line>ASP CA 372</line>
</n14>
</entryChain>
<parallel>
<x>11.13700008392334</x>
<y>35.61899948120117</y>
<z>23.53700065612793</z>
</parallel>
<rotation>
<x>0.2070000022649765</x>
<y>0.9779999852180481</y>
<z>0.029999999329447746</z>
<x>-0.9589999914169312</x>
<y>0.20900000631809235</y>
<z>-0.1889999955892563</z>
<x>-0.19099999964237213</x>
<y>0.009999999776482582</y>
<z>0.9819999933242798</z>
</rotation>
<rmsd>0.7303789854049683</rmsd>
<dmax>1.3217430114746094</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1QSW</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1QSWA</entryIDChain>
<sequence>GAVNA-CHLSC</sequence>
<secondary-structure> - G</secondary-structure>
<atom-coordinate>
<line>ATOM 570 CA GLY A 72 3.492 -10.972 16.002 1.00 82.11 C </line>
<line>ATOM 574 CA ALA A 73 1.861 -7.671 17.067 1.00 76.66 C </line>
<line>ATOM 579 CA VAL A 74 -0.020 -5.861 14.286 1.00 68.76 C </line>
<line>ATOM 586 CA ASN A 75 -2.792 -3.337 13.827 1.00 59.04 C </line>
<line>ATOM 594 CA ALA A 76 -5.167 -5.780 12.112 1.00 48.06 C </line>
<line>ATOM 599 CA CYS A 77 -7.701 -4.555 9.595 1.00 38.23 C </line>
<line>ATOM 605 CA HIS A 78 -11.422 -4.929 10.012 1.00 38.21 C </line>
<line>ATOM 615 CA LEU A 79 -11.867 -6.878 6.751 1.00 35.37 C </line>
<line>ATOM 623 CA SER A 80 -11.285 -10.260 5.089 1.00 32.57 C </line>
<line>ATOM 629 CA CYS A 81 -8.360 -10.557 2.649 1.00 27.16 C </line>
</atom-coordinate>
<distance-map>
<line> CYS SER LEU HIS CYS ALA ASN VAL ALA GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 17.86 18.38 18.39 17.17 14.41 10.82 10.12 6.43 3.83 </line>
<line>ALA CA 17.91 17.97 17.19 15.29 12.53 8.80 7.14 3.81 </line>
<line>VAL CA 15.07 15.19 14.08 12.21 9.09 5.59 3.78 </line>
<line>ASN CA 14.42 14.01 12.04 9.57 6.59 3.81 </line>
<line>ALA CA 11.07 10.34 8.65 6.65 3.78 </line>
<line>CYS CA 9.20 8.11 5.55 3.76 </line>
<line>HIS CA 9.76 7.26 3.83 </line>
<line>LEU CA 6.53 3.81 </line>
<line>SER CA 3.82 </line>
<line>CYS CA </line>
</distance-map>
<n14>
<line>GLY CA 166</line>
<line>ALA CA 182</line>
<line>VAL CA 253</line>
<line>ASN CA 259</line>
<line>ALA CA 283</line>
<line>CYS CA 299</line>
<line>HIS CA 214</line>
<line>LEU CA 237</line>
<line>SER CA 225</line>
<line>CYS CA 318</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BVX</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BVXA</entryIDChain>
<sequence>PGSRNLCNIPC</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 553 CA PRO A 70 14.695 14.927 35.350 1.00 32.37 C </line>
<line>ATOM 560 CA GLY A 71 12.051 16.294 37.715 1.00 36.80 C </line>
<line>ATOM 564 CA SER A 72 9.443 16.568 35.008 1.00 33.38 C </line>
<line>ATOM 570 CA ARG A 73 5.753 16.091 35.730 1.00 31.49 C </line>
<line>ATOM 581 CA ASN A 74 3.700 13.781 33.502 1.00 21.59 C </line>
<line>ATOM 589 CA LEU A 75 0.472 15.820 33.574 1.00 18.57 C </line>
<line>ATOM 597 CA CYS A 76 -1.077 14.028 30.579 1.00 17.25 C </line>
<line>ATOM 603 CA ASN A 77 -0.058 10.613 31.990 1.00 24.23 C </line>
<line>ATOM 611 CA ILE A 78 1.412 9.193 28.805 1.00 20.21 C </line>
<line>ATOM 619 CA PRO A 79 4.813 8.211 27.407 1.00 18.33 C </line>
<line>ATOM 626 CA CYS A 80 5.935 10.993 25.036 1.00 13.31 C </line>
</atom-coordinate>
<distance-map>
<line> CYS PRO ILE ASN CYS LEU ASN ARG SER GLY PRO </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PRO CA 14.09 14.35 15.88 15.73 16.50 14.36 11.21 9.03 5.51 3.80 </line>
<line>GLY CA 15.04 14.97 15.59 14.55 15.11 12.31 9.69 6.61 3.77 </line>
<line>SER CA 11.95 12.21 12.54 11.61 11.69 9.12 6.56 3.79 </line>
<line>ARG CA 11.85 11.50 10.69 8.82 8.80 5.71 3.81 </line>
<line>ASN CA 9.19 8.33 6.95 5.14 5.61 3.82 </line>
<line>LEU CA 11.23 10.71 8.22 5.47 3.82 </line>
<line>CYS CA 9.44 8.87 5.72 3.83 </line>
<line>ASN CA 9.19 7.11 3.78 </line>
<line>ILE CA 6.16 3.81 </line>
<line>PRO CA 3.82 </line>
<line>CYS CA </line>
</distance-map>
<n14>
<line>PRO CA 174</line>
<line>GLY CA 165</line>
<line>SER CA 235</line>
<line>ARG CA 230</line>
<line>ASN CA 268</line>
<line>LEU CA 271</line>
<line>CYS CA 306</line>
<line>ASN CA 236</line>
<line>ILE CA 261</line>
<line>PRO CA 267</line>
<line>CYS CA 362</line>
</n14>
</entryChain>
<parallel>
<x>-9.942000389099121</x>
<y>-20.184999465942383</y>
<z>-21.128000259399414</z>
</parallel>
<rotation>
<x>0.7310000061988831</x>
<y>-0.6539999842643738</y>
<z>0.1940000057220459</z>
<x>0.6809999942779541</x>
<y>0.7120000123977661</y>
<z>-0.17100000381469727</z>
<x>-0.027000000700354576</x>
<y>0.257999986410141</y>
<z>0.9660000205039978</z>
</rotation>
<rmsd>1.4000600576400757</rmsd>
<dmax>2.8172430992126465</dmax>
</indel>